BLASTX nr result

ID: Coptis25_contig00023201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023201
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510452.1| pentatricopeptide repeat-containing protein,...   132   6e-29
ref|XP_003615697.1| Myrosinase-binding protein-like protein [Med...   129   5e-28
ref|XP_003552950.1| PREDICTED: agglutinin-like [Glycine max]          120   3e-25
gb|ABC70328.1| agglutinin isoform [Castanea crenata]                  120   4e-25
ref|XP_003539332.1| PREDICTED: myrosinase-binding protein-like A...   120   4e-25

>ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223551153|gb|EEF52639.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1218

 Score =  132 bits (333), Expect = 6e-29
 Identities = 69/126 (54%), Positives = 88/126 (69%), Gaps = 1/126 (0%)
 Frame = +3

Query: 204  VFSTIRQIQVVRGRRMILSIQTEYSAKNGDSIWSTRHGYTGADTVDTIQLDYPKEFLKRV 383
            VFS I+QI V R    I SIQ EY  +NG S+WS RHG +G    + ++L+YP E L R+
Sbjct: 1076 VFSGIKQIFVTRAEA-ICSIQIEYD-RNGQSVWSVRHGGSGGTATNRVKLEYPHEVLTRI 1133

Query: 384  TGFYQFEFGDNGMVLVQSLCFFTNKKRYGPFGVERGTYFTS-GKDGKVVGFHGRCGAYLD 560
            +G+Y     D    +V+SL F+T++ +YGPFG E GT+FTS   +GKVVGFHGRCGAYLD
Sbjct: 1134 SGYYGPASRDERPTVVKSLTFYTSRGQYGPFGEEIGTFFTSTTTEGKVVGFHGRCGAYLD 1193

Query: 561  AIGVHM 578
            AIGVHM
Sbjct: 1194 AIGVHM 1199



 Score =  116 bits (291), Expect = 5e-24
 Identities = 62/126 (49%), Positives = 85/126 (67%), Gaps = 1/126 (0%)
 Frame = +3

Query: 204  VFSTIRQIQVVRGRRMILSIQTEYSAKNGDSIWSTRHGYTGADTVDTIQLDYPKEFLKRV 383
            V+ST+RQ+ +V G   I SIQ EY  K G SIWS +HG  G +  D ++LDYP E+L  V
Sbjct: 650  VYSTVRQLVIVHGSG-IDSIQIEYD-KKGTSIWSEKHGGNGGNRTDKVKLDYPDEYLASV 707

Query: 384  TGFYQFEFGDNGMVLVQSLCFFTNKKRYGPFGVERGTYFT-SGKDGKVVGFHGRCGAYLD 560
            +G Y       G V V+SL F +NK+ YGPFGVE+GTYF+     G++VGFHG+ G ++D
Sbjct: 708  SGHYG-SLNQWGPVFVRSLTFQSNKRTYGPFGVEQGTYFSFPMTGGRIVGFHGKGGYFVD 766

Query: 561  AIGVHM 578
            AIG+++
Sbjct: 767  AIGIYL 772



 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 54/125 (43%), Positives = 79/125 (63%), Gaps = 3/125 (2%)
 Frame = +3

Query: 216  IRQIQVVRGRRMILSIQTEYSAKNGDSIWSTRHGYTGADTVDTIQLDYPKEFLKRVTGFY 395
            IRQI + R    I+SI+ +Y  +NG ++W ++HG TG    + I  DYP E L  ++G Y
Sbjct: 884  IRQIYLSRSIG-IVSIRVQYD-RNGQAVWGSKHGGTGGFKTEKITFDYPYEILTHISGTY 941

Query: 396  --QFEFGDNGMVLVQSLCFFTNKKRYGPFGVERGTYF-TSGKDGKVVGFHGRCGAYLDAI 566
                  G N   +++SL F+TNK ++GPFG E+G  F T    GK+VGFHG+ G +LDAI
Sbjct: 942  GPLMFMGPN---IIKSLTFYTNKGKHGPFGDEQGPSFSTKPNGGKIVGFHGKEGLFLDAI 998

Query: 567  GVHMV 581
            GV+++
Sbjct: 999  GVNLM 1003


>ref|XP_003615697.1| Myrosinase-binding protein-like protein [Medicago truncatula]
           gi|355517032|gb|AES98655.1| Myrosinase-binding
           protein-like protein [Medicago truncatula]
          Length = 604

 Score =  129 bits (325), Expect = 5e-28
 Identities = 73/133 (54%), Positives = 89/133 (66%), Gaps = 1/133 (0%)
 Frame = +3

Query: 204 VFSTIRQIQVVRGRRMILSIQTEYSAKNGDSIWSTRHGYTGADTVDTIQLDYPKEFLKRV 383
           ++S +RQ+ VV G   I SIQ EY  K G SIWS +HG TG +  D ++LDYP EFL  V
Sbjct: 33  IYSGVRQLVVVHGTG-IDSIQIEYD-KKGSSIWSEKHGGTGGNKTDKVKLDYPDEFLTSV 90

Query: 384 TGFYQFEFGDNGMVLVQSLCFFTNKKRYGPFGVERGTYFTSGKDG-KVVGFHGRCGAYLD 560
            G+Y       G  LV+SL F +NKK YGPFGVE+GTYF+    G K+VGFHGRCG YLD
Sbjct: 91  HGYYG-SLNQWGHNLVRSLSFESNKKTYGPFGVEQGTYFSVPMTGAKIVGFHGRCGWYLD 149

Query: 561 AIGVHMVY*LQPS 599
           AIGV+M    QP+
Sbjct: 150 AIGVYMKSLKQPN 162



 Score =  116 bits (290), Expect = 6e-24
 Identities = 60/126 (47%), Positives = 82/126 (65%), Gaps = 1/126 (0%)
 Frame = +3

Query: 204 VFSTIRQIQVVRGRRMILSIQTEYSAKNGDSIWSTRHGYTGADTVDTIQLDYPKEFLKRV 383
           VFS I+QI + +    I SIQ EY  +N  S+WS +HG  G DT+  IQL++P E L  +
Sbjct: 462 VFSAIKQIYLTKVSDGICSIQIEYD-RNRQSVWSIKHGGNGGDTMHRIQLEFPHEVLTCI 520

Query: 384 TGFYQFEFGDNGMVLVQSLCFFTNKKRYGPFGVERGTYFTS-GKDGKVVGFHGRCGAYLD 560
           +G+Y     D    +++SL F T++ +YGP+G E G +FTS   +GKVVGFHGR   YLD
Sbjct: 521 SGYYGSITKDEKHTVIKSLTFHTSRGQYGPYGEEVGKFFTSTTTEGKVVGFHGRSSLYLD 580

Query: 561 AIGVHM 578
           AIG+HM
Sbjct: 581 AIGIHM 586



 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 54/126 (42%), Positives = 77/126 (61%), Gaps = 1/126 (0%)
 Frame = +3

Query: 207 FSTIRQIQVVRGRRMILSIQTEYSAKNGDSIWSTRHGYTGADTVDTIQLDYPKEFLKRVT 386
           +  IRQI + R   ++  I+  Y   +GD+IW  + G TG    D I  D+P E L  ++
Sbjct: 267 YKGIRQINLSRNVGIVW-IRVMYD-HDGDAIWGCKQGGTGGYKSDKIVFDFPYEVLTYIS 324

Query: 387 GFYQFEFGDNGMVLVQSLCFFTNKKRYGPFGVERGTYFTSG-KDGKVVGFHGRCGAYLDA 563
           G Y       G  +++SL F T K++YGPFG E+GTYFT+  K+GK+VG HGR G +LDA
Sbjct: 325 G-YHGPLMYMGPAVIRSLTFHTTKRKYGPFGEEQGTYFTTKVKEGKIVGIHGRKGLFLDA 383

Query: 564 IGVHMV 581
            GVH++
Sbjct: 384 FGVHVL 389


>ref|XP_003552950.1| PREDICTED: agglutinin-like [Glycine max]
          Length = 604

 Score =  120 bits (302), Expect = 3e-25
 Identities = 67/132 (50%), Positives = 88/132 (66%), Gaps = 1/132 (0%)
 Frame = +3

Query: 204 VFSTIRQIQVVRGRRMILSIQTEYSAKNGDSIWSTRHGYTGADTVDTIQLDYPKEFLKRV 383
           V+ST+RQ+ +V G   I SIQ EY  K G SIWS ++G +G   +D I+LDYP EFL  +
Sbjct: 40  VYSTVRQLVIVHGEG-IDSIQIEYD-KQGSSIWSLKYGGSGGYKIDKIKLDYPDEFLTSI 97

Query: 384 TGFYQFEFGDNGMVLVQSLCFFTNKKRYGPFGVERGTYFT-SGKDGKVVGFHGRCGAYLD 560
            G+Y       G + ++SL F +NKK YGPFGVE+GTYF+     GK+VGFHGR G +LD
Sbjct: 98  DGYYG-SLSQWGPIFIRSLSFESNKKLYGPFGVEQGTYFSLPMTGGKIVGFHGRYGWHLD 156

Query: 561 AIGVHMVY*LQP 596
           AIGV++    QP
Sbjct: 157 AIGVNLKSSQQP 168



 Score =  115 bits (289), Expect = 8e-24
 Identities = 60/126 (47%), Positives = 81/126 (64%), Gaps = 1/126 (0%)
 Frame = +3

Query: 204 VFSTIRQIQVVRGRRMILSIQTEYSAKNGDSIWSTRHGYTGADTVDTIQLDYPKEFLKRV 383
           VFS I+QI + +    I SIQ EY  +   S+WS +HG  G +T+  I+L+YP E L  +
Sbjct: 461 VFSGIKQIYLTKAPEGICSIQIEYD-RYKQSVWSVKHGGNGGNTMHRIKLEYPNEVLTCI 519

Query: 384 TGFYQFEFGDNGMVLVQSLCFFTNKKRYGPFGVERGTYFTS-GKDGKVVGFHGRCGAYLD 560
           +G+Y     D   ++++SL F T++ +YGPFG E G YFTS   +GKVVG HGR   YLD
Sbjct: 520 SGYYGSVTADEQPIIIKSLTFHTSRGQYGPFGDEVGKYFTSTTTEGKVVGLHGRSSMYLD 579

Query: 561 AIGVHM 578
           AIGVHM
Sbjct: 580 AIGVHM 585



 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 49/126 (38%), Positives = 76/126 (60%), Gaps = 1/126 (0%)
 Frame = +3

Query: 207 FSTIRQIQVVRGRRMILSIQTEYSAKNGDSIWSTRHGYTGADTVDTIQLDYPKEFLKRVT 386
           ++ +RQI + R   ++  I+  Y   +G+ +W  +HG  G    + I  D+P E L  ++
Sbjct: 268 YTGVRQIDLSRNVGIVW-IRALYDL-DGEPVWGYKHGGAGGFKHEKIIFDFPYEVLTHIS 325

Query: 387 GFYQFEFGDNGMVLVQSLCFFTNKKRYGPFGVERGTYFTSG-KDGKVVGFHGRCGAYLDA 563
           G+Y       G  +++SL F T K+ YGPFG E GTYFT+  ++GKVVG HGR G +LD+
Sbjct: 326 GYYG-SLMYMGPAVIRSLTFHTTKRSYGPFGDEYGTYFTTKLREGKVVGIHGRSGLFLDS 384

Query: 564 IGVHMV 581
           +GVH +
Sbjct: 385 LGVHAI 390


>gb|ABC70328.1| agglutinin isoform [Castanea crenata]
          Length = 310

 Score =  120 bits (300), Expect = 4e-25
 Identities = 60/128 (46%), Positives = 83/128 (64%), Gaps = 1/128 (0%)
 Frame = +3

Query: 204 VFSTIRQIQVVRGRRMILSIQTEYSAKNGDSIWSTRHGYTGADTVDTIQLDYPKEFLKRV 383
           VF  IR++ +  G  +I +I+  Y +K+G+ + S +HG  G + +D I+L+  KEFL R+
Sbjct: 182 VFPAIRELHLYVGDSVIHAIRVSYQSKDGEPLLSPKHGGEGGEPIDPIKLEVSKEFLIRI 241

Query: 384 TGFYQFEFGDNGMVLVQSLCFFTNKKRYGPFGVERGTYFTSG-KDGKVVGFHGRCGAYLD 560
            GFY    G      ++S+ F+TNK +YGP+G E G  FTS    G+VVGFHGR GAYLD
Sbjct: 242 AGFYGPVEGSGSFKALRSITFYTNKAKYGPYGDEIGQAFTSSVAPGRVVGFHGRSGAYLD 301

Query: 561 AIGVHMVY 584
           AIGVHM Y
Sbjct: 302 AIGVHMEY 309



 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
 Frame = +3

Query: 303 STRHGYTGAD-TVDTIQLDYPKEFLKRVTGFYQFEFGDNGMVLVQSLCFFTNK-KRYGPF 476
           S + G TG     D I L++P+E+L  ++G     +     ++++S+ F TNK   YGP+
Sbjct: 55  SRKFGGTGEGWKTDKISLNWPEEYLTSISGTVADLWQH---IIIRSISFKTNKGTEYGPY 111

Query: 477 GVERGTYFT-SGKDGKVVGFHGRCGAYLDAIGVHM 578
           GV  G  F+ S + G +VGFHGR G  LDAIG ++
Sbjct: 112 GVVTGQPFSYSTEGGVIVGFHGRSGTLLDAIGAYV 146


>ref|XP_003539332.1| PREDICTED: myrosinase-binding protein-like At1g52040-like [Glycine
           max]
          Length = 594

 Score =  120 bits (300), Expect = 4e-25
 Identities = 64/126 (50%), Positives = 87/126 (69%), Gaps = 1/126 (0%)
 Frame = +3

Query: 204 VFSTIRQIQVVRGRRMILSIQTEYSAKNGDSIWSTRHGYTGADTVDTIQLDYPKEFLKRV 383
           V+ST+RQ+ +V G   I SIQ EY  K G SIWS ++G +G   +D I+LDYP+EFL  V
Sbjct: 30  VYSTVRQLVIVHGEG-IDSIQIEYD-KQGSSIWSLKYGGSGGYKIDKIKLDYPEEFLTSV 87

Query: 384 TGFYQFEFGDNGMVLVQSLCFFTNKKRYGPFGVERGTYFT-SGKDGKVVGFHGRCGAYLD 560
            G+Y       G + ++SL F +NKK YGPFGVE+GTYF+     GK++GFHGR G +LD
Sbjct: 88  DGYYG-SLNQWGPIFIRSLSFESNKKLYGPFGVEQGTYFSLPMTGGKIIGFHGRYGWHLD 146

Query: 561 AIGVHM 578
           AIG+++
Sbjct: 147 AIGINV 152



 Score =  115 bits (289), Expect = 8e-24
 Identities = 60/126 (47%), Positives = 81/126 (64%), Gaps = 1/126 (0%)
 Frame = +3

Query: 204 VFSTIRQIQVVRGRRMILSIQTEYSAKNGDSIWSTRHGYTGADTVDTIQLDYPKEFLKRV 383
           VFS I+QI + +    I SIQ EY  +   S+WS +HG  G +T+  I+L+YP E L  +
Sbjct: 451 VFSGIKQIYMTKAPEGICSIQIEYD-RYKQSVWSVKHGGNGGNTMHRIKLEYPNEVLSCI 509

Query: 384 TGFYQFEFGDNGMVLVQSLCFFTNKKRYGPFGVERGTYFTS-GKDGKVVGFHGRCGAYLD 560
           +G+Y     D   ++++SL F T++ +YGPFG E G YFTS   +GKVVG HGR   YLD
Sbjct: 510 SGYYGSITADEQPIIIKSLTFHTSRGQYGPFGDEVGKYFTSTTTEGKVVGLHGRSSMYLD 569

Query: 561 AIGVHM 578
           AIGVHM
Sbjct: 570 AIGVHM 575



 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 49/126 (38%), Positives = 76/126 (60%), Gaps = 1/126 (0%)
 Frame = +3

Query: 207 FSTIRQIQVVRGRRMILSIQTEYSAKNGDSIWSTRHGYTGADTVDTIQLDYPKEFLKRVT 386
           ++ +RQI + R   ++  I+  Y   +G+ +W  +HG  G    + I  D+P E L  ++
Sbjct: 258 YTGVRQIDMSRNVGIVW-IRALYDL-DGEPVWGYKHGGAGGFKHEKIIFDFPYEVLTHIS 315

Query: 387 GFYQFEFGDNGMVLVQSLCFFTNKKRYGPFGVERGTYFTSG-KDGKVVGFHGRCGAYLDA 563
           G+Y       G  +++SL F T K+ YGPFG E GTYFT+  ++GKVVG HGR G +LD+
Sbjct: 316 GYYG-SLMYMGPAVIRSLTFHTTKRPYGPFGDEYGTYFTTKLREGKVVGIHGRSGLFLDS 374

Query: 564 IGVHMV 581
           +GVH +
Sbjct: 375 LGVHAI 380


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