BLASTX nr result

ID: Coptis25_contig00023200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023200
         (1008 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271254.1| PREDICTED: uncharacterized protein LOC100251...   151   2e-34
ref|XP_002301635.1| predicted protein [Populus trichocarpa] gi|2...   139   1e-30
ref|XP_002531024.1| conserved hypothetical protein [Ricinus comm...   128   2e-27
ref|XP_002321117.1| predicted protein [Populus trichocarpa] gi|2...   126   9e-27
ref|XP_002442048.1| hypothetical protein SORBIDRAFT_08g008250 [S...   113   8e-23

>ref|XP_002271254.1| PREDICTED: uncharacterized protein LOC100251518 [Vitis vinifera]
           gi|297745164|emb|CBI39156.3| unnamed protein product
           [Vitis vinifera]
          Length = 220

 Score =  151 bits (382), Expect = 2e-34
 Identities = 97/226 (42%), Positives = 129/226 (57%), Gaps = 11/226 (4%)
 Frame = +3

Query: 42  MMDFLQQKQDLFNRQEEHAKEVKNSQQFGSVDVHPELSLGPS-RHGLLLPETTNXXXXXX 218
           M +F+QQ+ D  + +EE++++   SQQF  +   PELSL PS RHG+   ++TN      
Sbjct: 2   MKEFMQQEID--HMKEENSEK---SQQFWRIMEFPELSLAPSPRHGV--DKSTNSSSSES 54

Query: 219 XTKASRKRKCCWDHI--NSESRIQTSIELQVEDSLPLDWEQCLDLKSGRLYYLNRNTMKK 392
                 K++   DH+   S+  IQTS++LQ++D LPLDWEQCLDL+SGR+YYLNR T++K
Sbjct: 55  EANYPSKKRKFSDHLFNRSDPMIQTSVDLQLKDPLPLDWEQCLDLESGRMYYLNRKTLRK 114

Query: 393 SWKWP--NQDQKLDLELNI-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 551
           SW  P  +  QKLDLELNI                                         
Sbjct: 115 SWNCPKDHNQQKLDLELNISTLSNCPEKCSSFDSQRLQDHSKKHQHCSSSSNMVALACLN 174

Query: 552 CHLLVMLCRSSPSCPNCKYVHSLLAQESLVSQ-NPVKPFNTLSLLN 686
           CHLLV+L +SSPSCPNCKYVHSL  Q+   S+  P+K  +TLSLLN
Sbjct: 175 CHLLVILSKSSPSCPNCKYVHSLPTQQIPTSKAPPIKSLDTLSLLN 220


>ref|XP_002301635.1| predicted protein [Populus trichocarpa] gi|222843361|gb|EEE80908.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score =  139 bits (350), Expect = 1e-30
 Identities = 83/187 (44%), Positives = 105/187 (56%), Gaps = 7/187 (3%)
 Frame = +3

Query: 147 ELSLGPSRHGLLLPETTNXXXXXXXTKASRKRKCCWDHI--NSESRIQTSIELQVEDSLP 320
           ELSL P++   +L ++TN          SRKRK   D     + S IQ S++L V+D LP
Sbjct: 5   ELSLAPTQ--FVLEKSTNSSSSESENNPSRKRKFSSDQYLPKNGSPIQASVDLHVKDPLP 62

Query: 321 LDWEQCLDLKSGRLYYLNRNTMKKSWKWPNQDQKLDLELN----IXXXXXXXXXXXXXXX 488
           LDWEQCLDL+SGR+YYLNR T++KSW WP ++QKLDLELN    +               
Sbjct: 63  LDWEQCLDLESGRMYYLNRKTLRKSWNWP-RNQKLDLELNMSSTVVSNCLDQCSSSNNSL 121

Query: 489 XXXXXXXXXXXXXXXXXXXXXCHLLVMLCRSSPSCPNCKYVHSL-LAQESLVSQNPVKPF 665
                                CHLLV+L +SSPSCPNCKYVHSL + Q  L   +P +  
Sbjct: 122 EASNKIHAPSNSNMVALACLNCHLLVILSKSSPSCPNCKYVHSLPILQSPLPKVSPSRSL 181

Query: 666 NTLSLLN 686
           +TLSLLN
Sbjct: 182 STLSLLN 188


>ref|XP_002531024.1| conserved hypothetical protein [Ricinus communis]
           gi|223529399|gb|EEF31362.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 211

 Score =  128 bits (322), Expect = 2e-27
 Identities = 78/168 (46%), Positives = 89/168 (52%), Gaps = 17/168 (10%)
 Frame = +3

Query: 234 RKRKCCWDH------INSESRIQTSIELQVEDSLPLDWEQCLDLKSGRLYYLNRNTMKKS 395
           +KRK   DH        +   IQ S +L V+D LPLDWEQCLDL+SGR+YYLNR T++KS
Sbjct: 45  KKRKFLSDHHLLRTATTTGPPIQASFDLHVKDPLPLDWEQCLDLESGRMYYLNRKTLRKS 104

Query: 396 WKWPNQDQKLDLELNI---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 548
           W WP +DQKLDLELNI                                            
Sbjct: 105 WNWP-KDQKLDLELNISPLTDCTPDHHQQCNNNGSNSVLLEDSRNNFSSPSSNMVALACL 163

Query: 549 XCHLLVMLCRSSPSCPNCKYVHSL--LAQESLVSQNPVKPFNTLSLLN 686
            CHLLV+L RSSPSCPNCKYVHSL    Q  L   +P K  NTLSLLN
Sbjct: 164 NCHLLVILSRSSPSCPNCKYVHSLPITHQVLLPKISPTKSLNTLSLLN 211


>ref|XP_002321117.1| predicted protein [Populus trichocarpa] gi|222861890|gb|EEE99432.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  126 bits (316), Expect = 9e-27
 Identities = 79/188 (42%), Positives = 100/188 (53%), Gaps = 8/188 (4%)
 Frame = +3

Query: 147 ELSLGPSRHGLLLPETTNXXXXXXXTKASRKRKCCWDH---INSESRIQTSIELQVEDSL 317
           ELSL P++  L     ++       T  SRKRK   D    + +   IQ S++L V+D L
Sbjct: 5   ELSLAPAQFVLEKSRNSSSSSESENTP-SRKRKFFSDQYQLLKNGPPIQASVDLHVKDPL 63

Query: 318 PLDWEQCLDLKSGRLYYLNRNTMKKSWKWPNQDQKLDLELN----IXXXXXXXXXXXXXX 485
           PLDWEQCLDL+SGR+YYLNR T++KSW WP + QKLDLELN    I              
Sbjct: 64  PLDWEQCLDLESGRMYYLNRKTLRKSWNWPKK-QKLDLELNMSSTIPNCPDECSSSNSSL 122

Query: 486 XXXXXXXXXXXXXXXXXXXXXXCHLLVMLCRSSPSCPNCKYVHSLLAQESLVSQ-NPVKP 662
                                 CHLLV+  +SSPSCPNCKYVHS    +S   + +P + 
Sbjct: 123 EDSNNKNHASSNSNMVALACLNCHLLVIFSKSSPSCPNCKYVHSFPTLQSPQRKVSPTRS 182

Query: 663 FNTLSLLN 686
            +TLSLLN
Sbjct: 183 LSTLSLLN 190


>ref|XP_002442048.1| hypothetical protein SORBIDRAFT_08g008250 [Sorghum bicolor]
           gi|241942741|gb|EES15886.1| hypothetical protein
           SORBIDRAFT_08g008250 [Sorghum bicolor]
          Length = 231

 Score =  113 bits (282), Expect = 8e-23
 Identities = 78/225 (34%), Positives = 110/225 (48%), Gaps = 24/225 (10%)
 Frame = +3

Query: 84  QEEHAKEVKNSQQFGSVDVHPELSLGP------SRHGLLLPETTNXXXXXXXTKASRKRK 245
           Q+E A+ +   ++   +++ PELSLGP      +  GL   ++++        K  +   
Sbjct: 13  QQEAARSLSLQRR---MELQPELSLGPVWPGFATGGGLAAAKSSSSESDGSSRKKRKHYT 69

Query: 246 CCWDHINSESRIQTSIELQVEDSLPLDWEQCLDLKSGRLYYLNRNTMKKSWKWPNQDQKL 425
             W+  + +     S+ELQ+ D LPLDWEQCLDL+SGR+YYLNR T+KKSW  P ++Q +
Sbjct: 70  ASWEEPHQQP--PASLELQLNDPLPLDWEQCLDLQSGRMYYLNRKTLKKSWVRP-REQSV 126

Query: 426 DLELNI-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCHLLVML 572
           +L+LNI                                               CHLLVML
Sbjct: 127 NLDLNISTTAAVDSCAVADGAAAAAPDEDDEPRKPTGRALFSGGNMVAVPCANCHLLVML 186

Query: 573 CRSSPSCPNCKYVHSL--LAQESLVSQN-----PVKPFNTLSLLN 686
           C+SSPSCPNCK+V  L   A  + V  +      VKP  TLSLL+
Sbjct: 187 CKSSPSCPNCKFVQPLAPAAPPAAVMAHRRLDAAVKPLETLSLLH 231


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