BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023195
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512247.1| 40S ribosomal protein S24, putative [Ricinus...   196   2e-48
ref|XP_003591024.1| 40S ribosomal protein S24 [Medicago truncatu...   196   2e-48
gb|AFK40021.1| unknown [Lotus japonicus] gi|388516189|gb|AFK4615...   195   4e-48
gb|AFK34036.1| unknown [Lotus japonicus]                              195   4e-48
ref|XP_002518257.1| 40S ribosomal protein S24, putative [Ricinus...   195   4e-48

>ref|XP_002512247.1| 40S ribosomal protein S24, putative [Ricinus communis]
           gi|223548208|gb|EEF49699.1| 40S ribosomal protein S24,
           putative [Ricinus communis]
          Length = 137

 Score =  196 bits (497), Expect = 2e-48
 Identities = 101/142 (71%), Positives = 109/142 (76%)
 Frame = +2

Query: 2   TRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLSKIYEVXXXXXXXXXXXXXXXXXX 181
           TRKFMTNRLLSRKQF+IDVLHPGRANVSKAELKEKLS IYE                   
Sbjct: 10  TRKFMTNRLLSRKQFIIDVLHPGRANVSKAELKEKLSSIYE------------------- 50

Query: 182 XXXXXXXXSKIYEVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSIENAKKFEPKYRLIRNG 361
                        VKDPN+IFVFKFRTHFGGGKSTGFGLIYDS+ENAKK+EPKYRLIRNG
Sbjct: 51  -------------VKDPNTIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNG 97

Query: 362 LDTKVEKSRKQLKERKNRAKKI 427
           LDTK+EKSRKQ+KERKNR+KK+
Sbjct: 98  LDTKIEKSRKQMKERKNRSKKV 119


>ref|XP_003591024.1| 40S ribosomal protein S24 [Medicago truncatula]
           gi|217075254|gb|ACJ85987.1| unknown [Medicago
           truncatula] gi|355480072|gb|AES61275.1| 40S ribosomal
           protein S24 [Medicago truncatula]
           gi|388501578|gb|AFK38855.1| unknown [Medicago
           truncatula] gi|388521723|gb|AFK48923.1| unknown
           [Medicago truncatula]
          Length = 137

 Score =  196 bits (497), Expect = 2e-48
 Identities = 101/142 (71%), Positives = 110/142 (77%)
 Frame = +2

Query: 2   TRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLSKIYEVXXXXXXXXXXXXXXXXXX 181
           TRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKL++IY+V                  
Sbjct: 10  TRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDV------------------ 51

Query: 182 XXXXXXXXSKIYEVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSIENAKKFEPKYRLIRNG 361
                         KDPN++FVFKFRTHFGGGKSTGFGLIYDS+ENAKK+EPKYRL+RNG
Sbjct: 52  --------------KDPNTVFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLVRNG 97

Query: 362 LDTKVEKSRKQLKERKNRAKKI 427
           LDTKVEKSRKQ+KERKNRAKKI
Sbjct: 98  LDTKVEKSRKQMKERKNRAKKI 119


>gb|AFK40021.1| unknown [Lotus japonicus] gi|388516189|gb|AFK46156.1| unknown
           [Lotus japonicus]
          Length = 137

 Score =  195 bits (495), Expect = 4e-48
 Identities = 100/142 (70%), Positives = 110/142 (77%)
 Frame = +2

Query: 2   TRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLSKIYEVXXXXXXXXXXXXXXXXXX 181
           TRKFMTNRLLSRKQF++DVLHPGRANVSKAELKEKL+++Y+V                  
Sbjct: 10  TRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDV------------------ 51

Query: 182 XXXXXXXXSKIYEVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSIENAKKFEPKYRLIRNG 361
                         KDPN++FVFKFRTHFGGGKSTGFGLIYDS+ENAKK+EPKYRLIRNG
Sbjct: 52  --------------KDPNTVFVFKFRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNG 97

Query: 362 LDTKVEKSRKQLKERKNRAKKI 427
           LDTKVEKSRKQLKERKNRAKKI
Sbjct: 98  LDTKVEKSRKQLKERKNRAKKI 119


>gb|AFK34036.1| unknown [Lotus japonicus]
          Length = 137

 Score =  195 bits (495), Expect = 4e-48
 Identities = 100/142 (70%), Positives = 110/142 (77%)
 Frame = +2

Query: 2   TRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLSKIYEVXXXXXXXXXXXXXXXXXX 181
           TRKFMTNRLLSRKQF++DVLHPGRANVSKAELKEKL+++Y+V                  
Sbjct: 10  TRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDV------------------ 51

Query: 182 XXXXXXXXSKIYEVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSIENAKKFEPKYRLIRNG 361
                         KDPN++FVFKFRTHFGGGKSTGFGLIYDS+ENAKK+EPKYRLIRNG
Sbjct: 52  --------------KDPNTVFVFKFRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNG 97

Query: 362 LDTKVEKSRKQLKERKNRAKKI 427
           LDTKVEKSRKQLKERKNRAKKI
Sbjct: 98  LDTKVEKSRKQLKERKNRAKKI 119


>ref|XP_002518257.1| 40S ribosomal protein S24, putative [Ricinus communis]
           gi|223542604|gb|EEF44143.1| 40S ribosomal protein S24,
           putative [Ricinus communis]
          Length = 137

 Score =  195 bits (495), Expect = 4e-48
 Identities = 101/142 (71%), Positives = 109/142 (76%)
 Frame = +2

Query: 2   TRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLSKIYEVXXXXXXXXXXXXXXXXXX 181
           TRKFMTNRLLSRKQF+IDVLHPGRANVSKAELKEKL+ IYEV                  
Sbjct: 10  TRKFMTNRLLSRKQFIIDVLHPGRANVSKAELKEKLASIYEV------------------ 51

Query: 182 XXXXXXXXSKIYEVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSIENAKKFEPKYRLIRNG 361
                         KDPN+IFVFKFRTHFGGGKSTGFGLIYDS+ENAKK+EPKYRLIRNG
Sbjct: 52  --------------KDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNG 97

Query: 362 LDTKVEKSRKQLKERKNRAKKI 427
           LDTKVEKSRKQ+KERKNR+KK+
Sbjct: 98  LDTKVEKSRKQMKERKNRSKKV 119