BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023194
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD26953.1| putative non-LTR retrolelement reverse transcript...    97   3e-18
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    94   3e-17
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    93   4e-17
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    93   6e-17

>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 323

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 52/145 (35%), Positives = 76/145 (52%)
 Frame = -3

Query: 660 IWFRNKIPRFSFIAWLALRKGLKTLHKLKEWKVVALDSCVLCNQGTETEEHLFFTCVYGR 481
           +WF+++IP+ +FI W+A  K L T  +L +W +     CVLCN   ET +HLFF C +  
Sbjct: 158 VWFKDRIPKHAFICWVAAWKRLHTRDRLTQWGLNIPTVCVLCNVVDETHDHLFFQCQFSN 217

Query: 480 EIWESLLVRAGYNRGIAPTWQQELEWIQQKSEGKGGFQDVLRLLFTGFIYWTWKERNCRC 301
           EIW   ++RAG        +   L W++  S  K     +++LLF   +Y  W+ERNCR 
Sbjct: 218 EIWSFFMIRAGMTP--PHLFGPILLWLKSASSSK-NLSLIIKLLFQASVYLIWRERNCRI 274

Query: 300 FDHKFAATTTVSNLILKDVQAKIHA 226
                    T    I+K+VQ  I A
Sbjct: 275 HTTHSRTPPT----IIKEVQQLIRA 295


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
 Frame = -3

Query: 669 HNIIWFRNKIPRFSFIAWLALRKGLKTLHKLKEWKVVALDSCVLCNQGTETEEHLFFTCV 490
           H+I+WF+N +PR SF+ W+A+++ L T  KL  + +   + C LC +  E   HLFF C 
Sbjct: 343 HDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECS 402

Query: 489 YGREIWESLLVRAGYNRGIAPTWQQELEWIQQKSEGKGGFQDVLRLLFTGFIYWTWKERN 310
           Y + IW  +  R    R +   W + + W      GK       +L F   +Y  W+ERN
Sbjct: 403 YTKAIWWDVCDRCDIPR-MTKGWDEWIRWATVSWHGKSFVNFSCKLSFAATVYHVWQERN 461

Query: 309 CRCFDHKFAATTTVSNLILKDVQAKIH-AMDVKMEEGP--EKYKFEQLW 172
            R     FA  +   NL+L  ++  I   +D+     P  E  + ++ W
Sbjct: 462 ARI----FAGMSRTPNLVLNQIECIIRDKLDLMRNVVPTNENTRIQRAW 506


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
 Frame = -3

Query: 669  HNIIWFRNKIPRFSFIAWLALRKGLKTLHKLKEWKVVALDSCVLCNQGTETEEHLFFTCV 490
            H+I+WF+N +PR SF+ W+A+++ L T  KL  + +   + C LC +  E   HLFF C 
Sbjct: 1216 HDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLYRFGIHGPNRCSLCLRNNEDHNHLFFECS 1275

Query: 489  YGREIWESLLVRAGYNRGIAPTWQQELEWIQQKSEGKGGFQDVLRLLFTGFIYWTWKERN 310
            Y + IW  +  R    R +   W + + W      GK       +L F   +Y  W+ERN
Sbjct: 1276 YTKAIWWDVCDRCDIPR-MTKGWDEWIRWATVSWHGKSFVNFSRKLSFAATVYHVWQERN 1334

Query: 309  CRCFDHKFAATTTVSNLILKDVQAKIH-AMDVKMEEGP--EKYKFEQLW 172
             R     FA  +   NL+L  ++  I   +D+     P  E  + ++ W
Sbjct: 1335 ARI----FAGMSRTPNLVLNQIECIIRDKLDLMRNVVPTNENTRIQRAW 1379


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 3/169 (1%)
 Frame = -3

Query: 669  HNIIWFRNKIPRFSFIAWLALRKGLKTLHKLKEWKVVALDSCVLCNQGTETEEHLFFTCV 490
            H+I+WF+N +PR SF+ W+ +++ L T  KL  + +   + C LC +  E   HLFF C 
Sbjct: 876  HDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECS 935

Query: 489  YGREIWESLLVRAGYNRGIAPTWQQELEWIQQKSEGKGGFQDVLRLLFTGFIYWTWKERN 310
            Y + IW  +  R    R +   W + + W      GK       +L F   +Y  W+ERN
Sbjct: 936  YTKAIWWDVCDRCDIPR-MTKGWDEWIRWATVSWHGKSFINFSRKLSFAATVYHVWQERN 994

Query: 309  CRCFDHKFAATTTVSNLILKDVQAKIH-AMDVKMEEGP--EKYKFEQLW 172
             R     FA  +  SNL+   ++  I   +D+     P  E  + ++ W
Sbjct: 995  ARI----FAGLSRTSNLVFNQIECIIRDKLDLMRNVVPTNENKRIQRAW 1039


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 3/169 (1%)
 Frame = -3

Query: 669 HNIIWFRNKIPRFSFIAWLALRKGLKTLHKLKEWKVVALDSCVLCNQGTETEEHLFFTCV 490
           H+I+WF+N +PR SF+ W+ +++ L T  KL  + +   + C LC +  E   HLFF C 
Sbjct: 161 HDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECS 220

Query: 489 YGREIWESLLVRAGYNRGIAPTWQQELEWIQQKSEGKGGFQDVLRLLFTGFIYWTWKERN 310
           Y + IW  +  R    R +   W + + W      GK       +L F   +Y  W+ERN
Sbjct: 221 YTKAIWWDVCDRCDIPR-MTKGWDEWIRWATVSWHGKSFVNFSRKLSFAATVYHVWQERN 279

Query: 309 CRCFDHKFAATTTVSNLILKDVQAKIH-AMDVKMEEGP--EKYKFEQLW 172
            R     FA  +  SNL+   ++  I   +D+     P  E  + ++ W
Sbjct: 280 ARI----FAGLSRTSNLVFNQIECIIRDKLDLMRNVVPTNENKRIQRAW 324