BLASTX nr result

ID: Coptis25_contig00023184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023184
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312645.1| multidrug resistance protein ABC transporter...    92   6e-17
ref|XP_002515003.1| multidrug resistance-associated protein 2, 6...    79   4e-13
ref|XP_002315633.1| multidrug resistance protein ABC transporter...    71   8e-11
dbj|BAB90531.1| putative MRP-like ABC transporter [Oryza sativa ...    70   1e-10
gb|EEE55832.1| hypothetical protein OsJ_04442 [Oryza sativa Japo...    70   1e-10

>ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222852465|gb|EEE90012.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1361

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 48/85 (56%), Positives = 61/85 (71%), Gaps = 5/85 (5%)
 Frame = +2

Query: 2   IVQSGKYKDLIADPYGELVRQMAAHRQSLSQVTPHEDNISFTYGTNSINQTNHTEEKW-- 175
           IVQSGKY+DLIADP GELVRQMAAHR+SL+QV P +++  FT G++ +NQ   TEEK+  
Sbjct: 708 IVQSGKYEDLIADPTGELVRQMAAHRRSLNQVNPPQEDNPFTGGSSQLNQNEVTEEKFEG 767

Query: 176 ---ANLILDNNKEEVTETSRVKWQV 241
               +      +EEV+ET RVKW V
Sbjct: 768 PTGTDRFSRKTQEEVSETGRVKWSV 792


>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223546054|gb|EEF47557.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1464

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 43/85 (50%), Positives = 56/85 (65%), Gaps = 5/85 (5%)
 Frame = +2

Query: 2    IVQSGKYKDLIADPYGELVRQMAAHRQSLSQVTPHEDNISFTYGTNSINQTNHTEEKWA- 178
            IVQSGKY+DLIADP  ELVRQMAAH++SL+QV P  ++ + T     +NQ   TEE+   
Sbjct: 804  IVQSGKYEDLIADPTSELVRQMAAHKKSLNQVNPPPEDNALTSVACQLNQNEVTEEELEE 863

Query: 179  ----NLILDNNKEEVTETSRVKWQV 241
                + + +  +EE TET RVKW V
Sbjct: 864  PISNSRLSEGTQEEETETGRVKWSV 888


>ref|XP_002315633.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222864673|gb|EEF01804.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1044

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 42/85 (49%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
 Frame = +2

Query: 2   IVQSGKYKDLIADPYGELVRQMAAHRQSLSQVTPHEDNISFTYGTNSINQTNHTEEKW-- 175
           IVQSGKY+DLIADP GELVRQM AHR+SL                N +NQ   TEEK+  
Sbjct: 420 IVQSGKYEDLIADPTGELVRQMVAHRRSL----------------NQLNQIEVTEEKFEE 463

Query: 176 ---ANLILDNNKEEVTETSRVKWQV 241
              ++   +  +EEV+ET RVKW V
Sbjct: 464 PSSSDRFSERTQEEVSETGRVKWSV 488


>dbj|BAB90531.1| putative MRP-like ABC transporter [Oryza sativa Japonica Group]
           gi|27368889|emb|CAD59602.1| MRP-like ABC transporter
           [Oryza sativa Japonica Group]
          Length = 1386

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/80 (47%), Positives = 50/80 (62%)
 Frame = +2

Query: 2   IVQSGKYKDLIADPYGELVRQMAAHRQSLSQVTPHEDNISFTYGTNSINQTNHTEEKWAN 181
           IVQSGKY DL+AD  GEL  QMAAH QSLSQVTP + ++     ++   QT  TE +  +
Sbjct: 737 IVQSGKYDDLVADRNGELSMQMAAHNQSLSQVTPAKAHVLTKNKSHKRRQTELTEIELDH 796

Query: 182 LILDNNKEEVTETSRVKWQV 241
            ++    EE  E+ RVKW +
Sbjct: 797 NVIGRECEEERESGRVKWDI 816


>gb|EEE55832.1| hypothetical protein OsJ_04442 [Oryza sativa Japonica Group]
          Length = 1190

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/80 (47%), Positives = 50/80 (62%)
 Frame = +2

Query: 2   IVQSGKYKDLIADPYGELVRQMAAHRQSLSQVTPHEDNISFTYGTNSINQTNHTEEKWAN 181
           IVQSGKY DL+AD  GEL  QMAAH QSLSQVTP + ++     ++   QT  TE +  +
Sbjct: 541 IVQSGKYDDLVADRNGELSMQMAAHNQSLSQVTPAKAHVLTKNKSHKRRQTELTEIELDH 600

Query: 182 LILDNNKEEVTETSRVKWQV 241
            ++    EE  E+ RVKW +
Sbjct: 601 NVIGRECEEERESGRVKWDI 620


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