BLASTX nr result

ID: Coptis25_contig00023182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023182
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267871.2| PREDICTED: translational activator GCN1 isof...   103   2e-20
emb|CBI28651.3| unnamed protein product [Vitis vinifera]              103   2e-20
ref|XP_004155110.1| PREDICTED: LOW QUALITY PROTEIN: translationa...   101   6e-20
ref|XP_004152809.1| PREDICTED: translational activator GCN1-like...    99   4e-19
gb|AAD38254.1|AC006193_10 similar to translational activator [Ar...    99   4e-19

>ref|XP_002267871.2| PREDICTED: translational activator GCN1 isoform 1 [Vitis vinifera]
          Length = 2613

 Score =  103 bits (256), Expect = 2e-20
 Identities = 59/96 (61%), Positives = 70/96 (72%)
 Frame = -2

Query: 293 EVLKRVDELVTTSSTKLRIKLFRDDILSSLLQNNSEMSVDLASQLVDIIFKTLLVYDDGA 114
           E L  +   V+T STK R+++FRD+I   L   NSEMS +LAS LVDIIF TL +YDD  
Sbjct: 6   ESLAAIAGSVSTVSTKKRVRIFRDEIPPIL--TNSEMSAELASLLVDIIFNTLYIYDDHG 63

Query: 113 SRKVVDNVIVKALDQMNFMKSFAATLVQAMEKQLKF 6
           SRK VD+VI KAL ++ FMKSFAATLVQ MEKQ KF
Sbjct: 64  SRKAVDDVISKALGEVIFMKSFAATLVQFMEKQSKF 99


>emb|CBI28651.3| unnamed protein product [Vitis vinifera]
          Length = 2636

 Score =  103 bits (256), Expect = 2e-20
 Identities = 59/96 (61%), Positives = 70/96 (72%)
 Frame = -2

Query: 293 EVLKRVDELVTTSSTKLRIKLFRDDILSSLLQNNSEMSVDLASQLVDIIFKTLLVYDDGA 114
           E L  +   V+T STK R+++FRD+I   L   NSEMS +LAS LVDIIF TL +YDD  
Sbjct: 6   ESLAAIAGSVSTVSTKKRVRIFRDEIPPIL--TNSEMSAELASLLVDIIFNTLYIYDDHG 63

Query: 113 SRKVVDNVIVKALDQMNFMKSFAATLVQAMEKQLKF 6
           SRK VD+VI KAL ++ FMKSFAATLVQ MEKQ KF
Sbjct: 64  SRKAVDDVISKALGEVIFMKSFAATLVQFMEKQSKF 99


>ref|XP_004155110.1| PREDICTED: LOW QUALITY PROTEIN: translational activator GCN1-like
           [Cucumis sativus]
          Length = 2611

 Score =  101 bits (252), Expect = 6e-20
 Identities = 54/97 (55%), Positives = 71/97 (73%)
 Frame = -2

Query: 293 EVLKRVDELVTTSSTKLRIKLFRDDILSSLLQNNSEMSVDLASQLVDIIFKTLLVYDDGA 114
           ++L  +  LV+T STK RI++FR+ I +  +  NSE   + A QLVDIIF TL +YDD  
Sbjct: 6   DLLNSISGLVSTPSTKKRIRIFRNQIPA--IFKNSEAYEEFALQLVDIIFSTLFIYDDRG 63

Query: 113 SRKVVDNVIVKALDQMNFMKSFAATLVQAMEKQLKFN 3
           SR+ VDNVI+KAL ++ FMKSFAA LVQ+MEKQ KF+
Sbjct: 64  SREAVDNVIIKALSEITFMKSFAAALVQSMEKQSKFH 100


>ref|XP_004152809.1| PREDICTED: translational activator GCN1-like [Cucumis sativus]
          Length = 2611

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 53/97 (54%), Positives = 70/97 (72%)
 Frame = -2

Query: 293 EVLKRVDELVTTSSTKLRIKLFRDDILSSLLQNNSEMSVDLASQLVDIIFKTLLVYDDGA 114
           ++L  +  LV+T STK RI++F + I +  +  NSE   + A QLVDIIF TL +YDD  
Sbjct: 6   DLLNSISGLVSTPSTKKRIRIFLNQIPA--IFKNSEAYEEFALQLVDIIFSTLFIYDDRG 63

Query: 113 SRKVVDNVIVKALDQMNFMKSFAATLVQAMEKQLKFN 3
           SR+ VDNVI+KAL ++ FMKSFAA LVQ+MEKQ KF+
Sbjct: 64  SREAVDNVIIKALSEITFMKSFAAALVQSMEKQSKFH 100


>gb|AAD38254.1|AC006193_10 similar to translational activator [Arabidopsis thaliana]
          Length = 2698

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 53/96 (55%), Positives = 70/96 (72%)
 Frame = -2

Query: 293 EVLKRVDELVTTSSTKLRIKLFRDDILSSLLQNNSEMSVDLASQLVDIIFKTLLVYDDGA 114
           E L  +   V+TSST +R+++FR DI   L   NS+M+ D+A  +VD+IF+TL +YDD A
Sbjct: 211 ESLLSISGSVSTSSTLIRLRIFRHDIPEIL--QNSDMTSDIAPVIVDMIFQTLAIYDDRA 268

Query: 113 SRKVVDNVIVKALDQMNFMKSFAATLVQAMEKQLKF 6
           SRK VD++IVK L  + FMK+FAA LVQ MEKQLKF
Sbjct: 269 SRKAVDDLIVKGLGNVTFMKTFAAMLVQVMEKQLKF 304


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