BLASTX nr result

ID: Coptis25_contig00023177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023177
         (1371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512665.1| conserved hypothetical protein [Ricinus comm...   354   3e-95
ref|XP_002299351.1| predicted protein [Populus trichocarpa] gi|2...   349   1e-93
ref|XP_002269943.2| PREDICTED: uncharacterized protein LOC100267...   338   1e-90
ref|XP_003556587.1| PREDICTED: uncharacterized protein LOC100779...   327   4e-87
emb|CBI15754.3| unnamed protein product [Vitis vinifera]              325   2e-86

>ref|XP_002512665.1| conserved hypothetical protein [Ricinus communis]
            gi|223548626|gb|EEF50117.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 347

 Score =  354 bits (908), Expect = 3e-95
 Identities = 189/318 (59%), Positives = 217/318 (68%), Gaps = 14/318 (4%)
 Frame = +1

Query: 133  VDGNDDVNKAPRLPRWTRHEILVLIEGKRVAENQVRRVRTGN---GSNQSEPKWVSISSY 303
            +DG DD +K PRLPRWTR EILVLI+GK+VAEN+VRR RT     GS Q EPKW S+SSY
Sbjct: 30   IDGADDGSKTPRLPRWTRQEILVLIQGKKVAENRVRRGRTAGMAFGSGQVEPKWASVSSY 89

Query: 304  CKRHGVSREPVQCRKRWSNLAGDFKKIKEWESGKSDESESFWIMRNDLRRERKLPGFFDR 483
            CKRHGV+R PVQCRKRWSNLAGD+KKIKEWE+   +E+ESFW+MRNDLRRERKLPGFFDR
Sbjct: 90   CKRHGVNRGPVQCRKRWSNLAGDYKKIKEWENHIREETESFWVMRNDLRRERKLPGFFDR 149

Query: 484  EIYDVLNNGTVTGTELXXXXXXXXXXXXXXXXXXXFDSGRTAAAEDGLFSXXXXXXXXXX 663
            E++D+L+                            FDSGRTAAAEDGLFS          
Sbjct: 150  EVFDILDGAGGVSAAPATPGLALALAPATEDSEAVFDSGRTAAAEDGLFSDFEQEDAGGS 209

Query: 664  XXXDCPK---------TSTIPAPFPISERRFQPMYKAFFYGGKTNVNQPASNPEKGSPSH 816
               +  K         T  I AP PISE+++QP  +     G TN  QP SNPE GS  H
Sbjct: 210  PEKEAVKEAPPIKAAATGGIAAPVPISEKQYQPAVRTDQSQGATNEKQPPSNPEMGSGLH 269

Query: 817  EGRKRKRLSSDDGGE--TTLQEQLVKVLERNNKMLTAQLEAQNNNCHLDRDQRKDQADSL 990
            E RKRKR  + DG E  TTLQ QL+ VLERN +MLTAQLEAQN N  LDR+QRKDQA+SL
Sbjct: 270  ESRKRKRFGTTDGDEETTTLQNQLIGVLERNGEMLTAQLEAQNTNFQLDREQRKDQANSL 329

Query: 991  IAVLNKLADALVKIADKM 1044
            +AVLNKLADAL KIADK+
Sbjct: 330  VAVLNKLADALGKIADKL 347


>ref|XP_002299351.1| predicted protein [Populus trichocarpa] gi|222846609|gb|EEE84156.1|
            predicted protein [Populus trichocarpa]
          Length = 346

 Score =  349 bits (895), Expect = 1e-93
 Identities = 194/326 (59%), Positives = 221/326 (67%), Gaps = 19/326 (5%)
 Frame = +1

Query: 124  TNGVD-----GNDDVNKAPRLPRWTRHEILVLIEGKRVAENQVRRVRT---GNGSNQSEP 279
            TNGVD     G DD NKAPRLPRWTR EILVLI+GKRVAEN+VRR R    G GS Q EP
Sbjct: 21   TNGVDTNIRDGGDDGNKAPRLPRWTRQEILVLIQGKRVAENRVRRGRASGMGIGSGQIEP 80

Query: 280  KWVSISSYCKRHGVSREPVQCRKRWSNLAGDFKKIKEWESGKSDESESFWIMRNDLRRER 459
            KW S+SSYCKRHGV+R PVQCRKRWSNLAGDFKKIKEWE+   +E+ESFW+MRNDLRRER
Sbjct: 81   KWASVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWETSIREETESFWVMRNDLRRER 140

Query: 460  KLPGFFDREIYDVLN--NGTVTGTELXXXXXXXXXXXXXXXXXXXFDSGRTAAAEDGLFS 633
            KLPGFFDRE+YD+L+   GTV G  L                   FDSGR+AAAEDGLFS
Sbjct: 141  KLPGFFDREVYDILDGGGGTVPGLALALAPSSTAAEAEAVAEEVVFDSGRSAAAEDGLFS 200

Query: 634  XXXXXXXXXXXXXDCPK--------TSTIPAPFPISERRFQPMYKAFFYGGKTNVNQPAS 789
                            +        T+ +  P PISE+++QP  +A       N  +PA+
Sbjct: 201  DFEQEEGGGSPEAVVKEVQPIKMAVTAGVANPTPISEKQYQPAPRASQAQVPPNDKRPAT 260

Query: 790  NPEKGSPSHEGRKRKRLSSDDGGET-TLQEQLVKVLERNNKMLTAQLEAQNNNCHLDRDQ 966
            NPE GS SHE RKRKR   D   ET +LQ  L+ VLERN KMLTAQLEAQN N  LDR+Q
Sbjct: 261  NPEMGSASHEERKRKRFVIDGDEETISLQSHLIDVLERNGKMLTAQLEAQNTNFQLDREQ 320

Query: 967  RKDQADSLIAVLNKLADALVKIADKM 1044
            RKD AD L+AVLNKLA+AL KIADK+
Sbjct: 321  RKDHADGLVAVLNKLANALGKIADKL 346


>ref|XP_002269943.2| PREDICTED: uncharacterized protein LOC100267783 [Vitis vinifera]
          Length = 340

 Score =  338 bits (868), Expect = 1e-90
 Identities = 186/324 (57%), Positives = 224/324 (69%), Gaps = 15/324 (4%)
 Frame = +1

Query: 118  AVTNGVDG-NDDVNKAPRLPRWTRHEILVLIEGKRVAENQVRRVRTGN---GSNQSEPKW 285
            AV NGV+   DD ++APRLPRWTR EILVLI+GK+VAE++VRR RTG    GS Q EPKW
Sbjct: 19   AVPNGVNAAGDDGSRAPRLPRWTRQEILVLIQGKKVAESRVRRGRTGGLAFGSAQIEPKW 78

Query: 286  VSISSYCKRHGVSREPVQCRKRWSNLAGDFKKIKEWESGKSDESESFWIMRNDLRRERKL 465
             S+SSYCKRHGV+R PVQCRKRWSNLAGD+KKIKEWES   DESESFW+MRND+RRE++L
Sbjct: 79   ASVSSYCKRHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIRDESESFWVMRNDVRREKRL 138

Query: 466  PGFFDREIYDVLN---------NGTVTGTELXXXXXXXXXXXXXXXXXXXFDSGRTAAAE 618
            PGFFDRE+YD+L+         +G   G  L                   FDSGR+AAAE
Sbjct: 139  PGFFDREVYDMLDGVGAAPPGPSGLALG--LAPAPEGEGMVAPEEEAEAVFDSGRSAAAE 196

Query: 619  DGLFSXXXXXXXXXXXXXDCPKT-STIPAPFPISERRFQPMYKAFFYGGKTNVNQPASNP 795
            DGLFS                +  +T+ AP PISE+++QP  +     G  +   PASNP
Sbjct: 197  DGLFSDFEQSGGSPEKEPPAKEVPATVAAPVPISEKQYQPFPREGSSQGPASKRHPASNP 256

Query: 796  EKGSPSHEGRKRKRLSSDDGGETT-LQEQLVKVLERNNKMLTAQLEAQNNNCHLDRDQRK 972
            E  S S EGRKRKR + D   ETT LQ+QL++VLERN +ML+ QLEAQN N  LDR+QRK
Sbjct: 257  EMASTSQEGRKRKRFTVDGDEETTRLQDQLIEVLERNGRMLSDQLEAQNTNFQLDREQRK 316

Query: 973  DQADSLIAVLNKLADALVKIADKM 1044
            DQAD L+AVL+KLADAL +IADK+
Sbjct: 317  DQADCLVAVLSKLADALGRIADKL 340


>ref|XP_003556587.1| PREDICTED: uncharacterized protein LOC100779050 [Glycine max]
          Length = 319

 Score =  327 bits (838), Expect = 4e-87
 Identities = 180/316 (56%), Positives = 215/316 (68%), Gaps = 9/316 (2%)
 Frame = +1

Query: 124  TNGVDGNDDVNKAPRLPRWTRHEILVLIEGKRVAENQVRRVRTGN---GSNQSEPKWVSI 294
            TNGVDG D+  KAPRLPRWTR EILVLI+GKR AEN+ RR RT     GS Q EPKW S+
Sbjct: 13   TNGVDGGDEGGKAPRLPRWTRQEILVLIQGKRDAENKFRRGRTAGLAFGSGQVEPKWASV 72

Query: 295  SSYCKRHGVSREPVQCRKRWSNLAGDFKKIKEWESGKSDESESFWIMRNDLRRERKLPGF 474
            SSYC++HGV+R PVQCRKRWSNLAGD+KKIKEWES   DE+ESFW+MRNDLRRERKL GF
Sbjct: 73   SSYCRKHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIRDETESFWVMRNDLRRERKLAGF 132

Query: 475  FDREIYDVLNNGT------VTGTELXXXXXXXXXXXXXXXXXXXFDSGRTAAAEDGLFSX 636
            FD+E+YD+L++G+      ++ +                     +DS R+A  EDGLFS 
Sbjct: 133  FDKEVYDILDSGSGPTTLALSLSSSPPPTTTITTTTVPDDPPHLYDSNRSAPGEDGLFS- 191

Query: 637  XXXXXXXXXXXXDCPKTSTIPAPFPISERRFQPMYKAFFYGGKTNVNQPASNPEKGSPSH 816
                        + P    IPAP PISE+++    +A    G TN     SNPE GS S 
Sbjct: 192  ----DFEQDEEKNPPSNKDIPAPIPISEKQYLRRCQA---EGVTNEKLSTSNPEMGSTSQ 244

Query: 817  EGRKRKRLSSDDGGETTLQEQLVKVLERNNKMLTAQLEAQNNNCHLDRDQRKDQADSLIA 996
              RKRKRL++ DG E TLQ QL+ VLERN KML+AQLEAQN N  LDR+QRKD A +L+A
Sbjct: 245  GERKRKRLTT-DGEEETLQYQLIDVLERNGKMLSAQLEAQNINFQLDREQRKDHASNLVA 303

Query: 997  VLNKLADALVKIADKM 1044
            VL+KLADAL KIADK+
Sbjct: 304  VLDKLADALGKIADKL 319


>emb|CBI15754.3| unnamed protein product [Vitis vinifera]
          Length = 339

 Score =  325 bits (833), Expect = 2e-86
 Identities = 176/324 (54%), Positives = 211/324 (65%), Gaps = 14/324 (4%)
 Frame = +1

Query: 115  VAVTNGVDGNDDVNKAPRLPRWTRHEILVLIEGKRVAENQVRRVRTGN---GSNQSEPKW 285
            V V+NG+DG DD NK  R PRWTR E  VLI+GK++AEN+VRR R  +   GS+Q EPKW
Sbjct: 17   VGVSNGIDGGDDKNKVARHPRWTRQETFVLIQGKKIAENRVRRGRRSSSAFGSDQVEPKW 76

Query: 286  VSISSYCKRHGVSREPVQCRKRWSNLAGDFKKIKEWESGKSDESESFWIMRNDLRRERKL 465
             S+SSYC+RHGV+R PVQCRKRWSNL GDFKKIK WES   +++ESFW++RNDLRRERKL
Sbjct: 77   DSVSSYCRRHGVNRGPVQCRKRWSNLVGDFKKIKTWESEVREDAESFWVLRNDLRRERKL 136

Query: 466  PGFFDREIYDVLNNGTVTGT--ELXXXXXXXXXXXXXXXXXXXFDSGRTAAAEDGLFS-- 633
            PGFFDRE+YDVL+    + T   L                   FDSGR AAAEDGLFS  
Sbjct: 137  PGFFDREVYDVLDGRAFSATAFPLALVSAMPDGEEEEEEEEAVFDSGRQAAAEDGLFSDS 196

Query: 634  -------XXXXXXXXXXXXXDCPKTSTIPAPFPISERRFQPMYKAFFYGGKTNVNQPASN 792
                                + P T T P P PISER+FQ  Y+     GK    Q  S+
Sbjct: 197  EQLGQEEASGSLEKETTAATESP-TQTTPIPLPISERKFQKFYQGCTSQGKQKGKQHCSD 255

Query: 793  PEKGSPSHEGRKRKRLSSDDGGETTLQEQLVKVLERNNKMLTAQLEAQNNNCHLDRDQRK 972
               G  S E  KR+R+S D   ET ++EQL+KVLERN+K L AQLEAQN N  LDRDQRK
Sbjct: 256  AWTGPMSEERWKRRRVSVDGCAETNMEEQLIKVLERNSKRLNAQLEAQNVNSQLDRDQRK 315

Query: 973  DQADSLIAVLNKLADALVKIADKM 1044
            D A+SL+A L+KL DA+V+IADK+
Sbjct: 316  DHANSLVAALSKLTDAIVRIADKL 339


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