BLASTX nr result

ID: Coptis25_contig00023173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023173
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285461.1| PREDICTED: uncharacterized protein LOC100257...    74   4e-23
ref|XP_002510050.1| conserved hypothetical protein [Ricinus comm...    79   7e-23
ref|XP_002302388.1| predicted protein [Populus trichocarpa] gi|2...    75   2e-22
ref|NP_564492.1| uncharacterized protein [Arabidopsis thaliana] ...    74   3e-21
ref|XP_002893999.1| predicted protein [Arabidopsis lyrata subsp....    73   4e-21

>ref|XP_002285461.1| PREDICTED: uncharacterized protein LOC100257450 [Vitis vinifera]
           gi|302142160|emb|CBI19363.3| unnamed protein product
           [Vitis vinifera]
          Length = 260

 Score = 73.9 bits (180), Expect(2) = 4e-23
 Identities = 34/44 (77%), Positives = 37/44 (84%)
 Frame = -1

Query: 386 AAKSWGVGIPLGLIIRGATSGHIPPVKFVLVTMGATAVLLIGWR 255
           AAKSW +GIPLGLIIR ATSGHIP   F+LVTMG+T  LLIGWR
Sbjct: 180 AAKSWALGIPLGLIIRAATSGHIPSSNFILVTMGSTGFLLIGWR 223



 Score = 58.9 bits (141), Expect(2) = 4e-23
 Identities = 27/36 (75%), Positives = 29/36 (80%)
 Frame = -3

Query: 153 LLFTALLKDKGKKNDTYKSGSPFELFELLTSLVRRW 46
           LLF+    DK KKND Y+ GSPFELFELLTSLVRRW
Sbjct: 225 LLFSIFPNDKSKKNDVYRRGSPFELFELLTSLVRRW 260


>ref|XP_002510050.1| conserved hypothetical protein [Ricinus communis]
           gi|223550751|gb|EEF52237.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 276

 Score = 78.6 bits (192), Expect(2) = 7e-23
 Identities = 36/44 (81%), Positives = 38/44 (86%)
 Frame = -1

Query: 386 AAKSWGVGIPLGLIIRGATSGHIPPVKFVLVTMGATAVLLIGWR 255
           A KSW VGIPLGLIIR  TSGHIPP  FVLVTMG+TAVLL+GWR
Sbjct: 196 AVKSWAVGIPLGLIIRAVTSGHIPPYTFVLVTMGSTAVLLVGWR 239



 Score = 53.5 bits (127), Expect(2) = 7e-23
 Identities = 25/36 (69%), Positives = 29/36 (80%)
 Frame = -3

Query: 153 LLFTALLKDKGKKNDTYKSGSPFELFELLTSLVRRW 46
           LL + L  ++ KKND Y+ GSPFELFELLTSLVRRW
Sbjct: 241 LLSSILPTNESKKNDVYRRGSPFELFELLTSLVRRW 276


>ref|XP_002302388.1| predicted protein [Populus trichocarpa] gi|222844114|gb|EEE81661.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score = 75.1 bits (183), Expect(2) = 2e-22
 Identities = 34/44 (77%), Positives = 37/44 (84%)
 Frame = -1

Query: 386 AAKSWGVGIPLGLIIRGATSGHIPPVKFVLVTMGATAVLLIGWR 255
           AAKSW  GIPLGLIIR A+SGH+PP  F LVTMG+T VLLIGWR
Sbjct: 182 AAKSWATGIPLGLIIRAASSGHVPPSTFTLVTMGSTGVLLIGWR 225



 Score = 55.8 bits (133), Expect(2) = 2e-22
 Identities = 26/36 (72%), Positives = 28/36 (77%)
 Frame = -3

Query: 153 LLFTALLKDKGKKNDTYKSGSPFELFELLTSLVRRW 46
           LL   L  D+ KKND Y+ GSPFELFELLTSLVRRW
Sbjct: 227 LLSRVLSNDESKKNDVYRRGSPFELFELLTSLVRRW 262


>ref|NP_564492.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8656004|gb|AAF78277.1|AC020576_21 Contains similarity
           to hypothetical protein F27F5.3 gi|7767678 from
           Arabidopsis thaliana F27F5 gb|AC007915 and contains a
           terpene synthase PF|01397 domain [Arabidopsis thaliana]
           gi|13878107|gb|AAK44131.1|AF370316_1 unknown protein
           [Arabidopsis thaliana] gi|17104773|gb|AAL34275.1|
           unknown protein [Arabidopsis thaliana]
           gi|332193943|gb|AEE32064.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 258

 Score = 73.6 bits (179), Expect(2) = 3e-21
 Identities = 35/44 (79%), Positives = 38/44 (86%)
 Frame = -1

Query: 386 AAKSWGVGIPLGLIIRGATSGHIPPVKFVLVTMGATAVLLIGWR 255
           AAKSW VG PLG+IIR A+SGHIP   FVLVTMG+TAVLLIGWR
Sbjct: 178 AAKSWIVGTPLGIIIRSASSGHIPAYSFVLVTMGSTAVLLIGWR 221



 Score = 53.1 bits (126), Expect(2) = 3e-21
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = -3

Query: 153 LLFTALLKDKGKKNDTYKSGSPFELFELLTSLVRRW 46
           LLF+ L  +  KK+DTY+ GS FELFELLTSL+RRW
Sbjct: 223 LLFSVLPTESKKKDDTYRKGSAFELFELLTSLIRRW 258


>ref|XP_002893999.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297339841|gb|EFH70258.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 259

 Score = 73.2 bits (178), Expect(2) = 4e-21
 Identities = 35/44 (79%), Positives = 38/44 (86%)
 Frame = -1

Query: 386 AAKSWGVGIPLGLIIRGATSGHIPPVKFVLVTMGATAVLLIGWR 255
           AAKSW VG PLG+IIR A+SGHIP   FVLVTMG+TAVLLIGWR
Sbjct: 179 AAKSWIVGAPLGIIIRSASSGHIPASSFVLVTMGSTAVLLIGWR 222



 Score = 53.1 bits (126), Expect(2) = 4e-21
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = -3

Query: 153 LLFTALLKDKGKKNDTYKSGSPFELFELLTSLVRRW 46
           LLF+ L  +  KK+DTY+ GS FELFELLTSL+RRW
Sbjct: 224 LLFSVLPTESKKKDDTYRKGSAFELFELLTSLIRRW 259


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