BLASTX nr result
ID: Coptis25_contig00023159
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00023159 (319 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|2... 58 7e-07 ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine... 57 2e-06 >ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|222860074|gb|EEE97621.1| predicted protein [Populus trichocarpa] Length = 1017 Score = 58.2 bits (139), Expect = 7e-07 Identities = 40/106 (37%), Positives = 51/106 (48%), Gaps = 2/106 (1%) Frame = +1 Query: 1 PKCNIKKSKRTKISL--TLKVTXXXXXXXXXXXXXXXXXXXTKRPKGKTPKEQLPGDLRR 174 PKCN KKSK+ KI L L +T ++ K ++ + L L + Sbjct: 638 PKCNFKKSKKWKIPLWLILLLTIACGFLGVAVVSFVLLYLSRRKRKEQSSELSLKEPLPK 697 Query: 175 VSYNDLRKATDGFSSGNLIXXXXXXXXXXXXLQQDEASVAVKVLNL 312 VSY L KAT+GFSS NLI L QD+ VA+KVLNL Sbjct: 698 VSYEMLLKATNGFSSDNLIGEGGFGSVYRGILDQDDTVVAIKVLNL 743 >ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like, partial [Vitis vinifera] Length = 965 Score = 56.6 bits (135), Expect = 2e-06 Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 2/107 (1%) Frame = +1 Query: 1 PKCNIKKSKRTKISLTLKV--TXXXXXXXXXXXXXXXXXXXTKRPKGKTPKEQLPGDLRR 174 PKCN+++ K+ +SL LK+ ++ KG+ L + Sbjct: 566 PKCNLQEPKKRGLSLALKIIIATVSGLLAITCVLSFLIFLWLRKKKGEPASSSSEKSLLK 625 Query: 175 VSYNDLRKATDGFSSGNLIXXXXXXXXXXXXLQQDEASVAVKVLNLV 315 VSY L +ATDGFSS NLI L D ++AVKVLNL+ Sbjct: 626 VSYQSLLRATDGFSSSNLIGVGSFGSVYKGILDHDGTAIAVKVLNLL 672