BLASTX nr result

ID: Coptis25_contig00023159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023159
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine...    57   2e-06

>ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|222860074|gb|EEE97621.1|
           predicted protein [Populus trichocarpa]
          Length = 1017

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 40/106 (37%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
 Frame = +1

Query: 1   PKCNIKKSKRTKISL--TLKVTXXXXXXXXXXXXXXXXXXXTKRPKGKTPKEQLPGDLRR 174
           PKCN KKSK+ KI L   L +T                    ++ K ++ +  L   L +
Sbjct: 638 PKCNFKKSKKWKIPLWLILLLTIACGFLGVAVVSFVLLYLSRRKRKEQSSELSLKEPLPK 697

Query: 175 VSYNDLRKATDGFSSGNLIXXXXXXXXXXXXLQQDEASVAVKVLNL 312
           VSY  L KAT+GFSS NLI            L QD+  VA+KVLNL
Sbjct: 698 VSYEMLLKATNGFSSDNLIGEGGFGSVYRGILDQDDTVVAIKVLNL 743


>ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like, partial [Vitis vinifera]
          Length = 965

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
 Frame = +1

Query: 1   PKCNIKKSKRTKISLTLKV--TXXXXXXXXXXXXXXXXXXXTKRPKGKTPKEQLPGDLRR 174
           PKCN+++ K+  +SL LK+                       ++ KG+         L +
Sbjct: 566 PKCNLQEPKKRGLSLALKIIIATVSGLLAITCVLSFLIFLWLRKKKGEPASSSSEKSLLK 625

Query: 175 VSYNDLRKATDGFSSGNLIXXXXXXXXXXXXLQQDEASVAVKVLNLV 315
           VSY  L +ATDGFSS NLI            L  D  ++AVKVLNL+
Sbjct: 626 VSYQSLLRATDGFSSSNLIGVGSFGSVYKGILDHDGTAIAVKVLNLL 672


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