BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023139
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283452.1| PREDICTED: 39S ribosomal protein L47, mitoch...   148   4e-34
ref|XP_002320251.1| predicted protein [Populus trichocarpa] gi|1...   146   2e-33
ref|XP_002889667.1| ribosomal protein L29 family protein [Arabid...   145   3e-33
ref|NP_172261.1| ribosomal protein L29 family protein [Arabidops...   145   3e-33
ref|XP_004138121.1| PREDICTED: 39S ribosomal protein L47, mitoch...   145   4e-33

>ref|XP_002283452.1| PREDICTED: 39S ribosomal protein L47, mitochondrial isoform 1
           [Vitis vinifera] gi|225457112|ref|XP_002283459.1|
           PREDICTED: 39S ribosomal protein L47, mitochondrial
           isoform 2 [Vitis vinifera] gi|297733826|emb|CBI15073.3|
           unnamed protein product [Vitis vinifera]
          Length = 140

 Score =  148 bits (374), Expect = 4e-34
 Identities = 68/77 (88%), Positives = 73/77 (94%)
 Frame = +1

Query: 172 YNPLEAFFEADRSQEEEKPVVYGRGWKASELRLKSWDDLQKLWYVLLKEKNMLMTQRQML 351
           YNPLE FFEADRS +E+KPVVYGRGWKASELRLKSWDDL KLWY+LLKEKNMLMTQRQML
Sbjct: 31  YNPLEEFFEADRSPDEDKPVVYGRGWKASELRLKSWDDLHKLWYILLKEKNMLMTQRQML 90

Query: 352 NTQNLRFPNPERIPKVQ 402
            +QNLRFPNPERIPKV+
Sbjct: 91  QSQNLRFPNPERIPKVR 107


>ref|XP_002320251.1| predicted protein [Populus trichocarpa] gi|118483659|gb|ABK93723.1|
           unknown [Populus trichocarpa]
           gi|222861024|gb|EEE98566.1| predicted protein [Populus
           trichocarpa]
          Length = 142

 Score =  146 bits (368), Expect = 2e-33
 Identities = 66/77 (85%), Positives = 73/77 (94%)
 Frame = +1

Query: 172 YNPLEAFFEADRSQEEEKPVVYGRGWKASELRLKSWDDLQKLWYVLLKEKNMLMTQRQML 351
           +NPLE FFEADRSQ+E+KP+VYGR WKASELRLKSWDDLQKLWYVLLKEKNMLMTQRQML
Sbjct: 33  HNPLEEFFEADRSQDEDKPIVYGRSWKASELRLKSWDDLQKLWYVLLKEKNMLMTQRQML 92

Query: 352 NTQNLRFPNPERIPKVQ 402
           + QN RFPNPER+PKV+
Sbjct: 93  HAQNFRFPNPERLPKVR 109


>ref|XP_002889667.1| ribosomal protein L29 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297335509|gb|EFH65926.1| ribosomal protein
           L29 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 143

 Score =  145 bits (366), Expect = 3e-33
 Identities = 67/76 (88%), Positives = 72/76 (94%)
 Frame = +1

Query: 175 NPLEAFFEADRSQEEEKPVVYGRGWKASELRLKSWDDLQKLWYVLLKEKNMLMTQRQMLN 354
           NPLE FFE DRSQ+E+KPVVYGRGWKASELRLKSWDDLQKLWYVLLKEKNMLMTQRQML 
Sbjct: 35  NPLEEFFEFDRSQDEDKPVVYGRGWKASELRLKSWDDLQKLWYVLLKEKNMLMTQRQMLQ 94

Query: 355 TQNLRFPNPERIPKVQ 402
            QN++FPNPERIPKV+
Sbjct: 95  AQNMQFPNPERIPKVR 110


>ref|NP_172261.1| ribosomal protein L29 family protein [Arabidopsis thaliana]
           gi|14030695|gb|AAK53022.1|AF375438_1 At1g07830/F24B9_7
           [Arabidopsis thaliana] gi|19548071|gb|AAL87399.1|
           At1g07830/F24B9_7 [Arabidopsis thaliana]
           gi|332190068|gb|AEE28189.1| ribosomal protein L29 family
           protein [Arabidopsis thaliana]
          Length = 144

 Score =  145 bits (366), Expect = 3e-33
 Identities = 67/76 (88%), Positives = 72/76 (94%)
 Frame = +1

Query: 175 NPLEAFFEADRSQEEEKPVVYGRGWKASELRLKSWDDLQKLWYVLLKEKNMLMTQRQMLN 354
           NPLE FFE DRSQ+E+KPVVYGRGWKASELRLKSWDDLQKLWYVLLKEKNMLMTQRQML 
Sbjct: 36  NPLEEFFEFDRSQDEDKPVVYGRGWKASELRLKSWDDLQKLWYVLLKEKNMLMTQRQMLQ 95

Query: 355 TQNLRFPNPERIPKVQ 402
            QN++FPNPERIPKV+
Sbjct: 96  AQNMQFPNPERIPKVR 111


>ref|XP_004138121.1| PREDICTED: 39S ribosomal protein L47, mitochondrial-like [Cucumis
           sativus] gi|449528917|ref|XP_004171448.1| PREDICTED: 39S
           ribosomal protein L47, mitochondrial-like [Cucumis
           sativus]
          Length = 143

 Score =  145 bits (365), Expect = 4e-33
 Identities = 74/110 (67%), Positives = 78/110 (70%), Gaps = 2/110 (1%)
 Frame = +1

Query: 79  MFLVNVFKRTLFXXXXXXXXXXXXXXXXXXM--YNPLEAFFEADRSQEEEKPVVYGRGWK 252
           MFL  VF RT                       YNPLE FFEADRS ++ KPVVYGR WK
Sbjct: 1   MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWK 60

Query: 253 ASELRLKSWDDLQKLWYVLLKEKNMLMTQRQMLNTQNLRFPNPERIPKVQ 402
           ASELRLKSWDDL KLWYVLLKEKNMLMTQRQMLN QNL+FPNPERIPKV+
Sbjct: 61  ASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKFPNPERIPKVR 110