BLASTX nr result

ID: Coptis25_contig00023136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023136
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283347.1| PREDICTED: transcription factor MYB44 [Vitis...   162   3e-38
emb|CAN75196.1| hypothetical protein VITISV_014739 [Vitis vinifera]   162   3e-38
gb|AAY28930.1| sucrose responsive element binding protein [Vitis...   162   3e-38
ref|XP_002310702.1| predicted protein [Populus trichocarpa] gi|2...   161   4e-38
ref|XP_002524926.1| r2r3-myb transcription factor, putative [Ric...   160   1e-37

>ref|XP_002283347.1| PREDICTED: transcription factor MYB44 [Vitis vinifera]
          Length = 312

 Score =  162 bits (409), Expect = 3e-38
 Identities = 90/142 (63%), Positives = 98/142 (69%)
 Frame = +2

Query: 2   VISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTSEEDETIMRAHSKFGNKWATIARLLSXX 181
           +ISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTSEED+TIMRAH++FGNKWAT        
Sbjct: 37  LISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTSEEDDTIMRAHARFGNKWAT-------- 88

Query: 182 XXXXXXXXXXXXXXXXXXXTIARLLSGRTDNAIKNHWNSTLKRKCCSMIEDGNSNDGFGG 361
                               IARLLSGRTDNAIKNHWNSTLKRKC ++ EDG+    FGG
Sbjct: 89  --------------------IARLLSGRTDNAIKNHWNSTLKRKCSAITEDGS----FGG 124

Query: 362 FEQDRRRQPSLKRSASAGASIP 427
              D    P LKRS SAGA+ P
Sbjct: 125 ---DYPPHP-LKRSVSAGAAAP 142


>emb|CAN75196.1| hypothetical protein VITISV_014739 [Vitis vinifera]
          Length = 301

 Score =  162 bits (409), Expect = 3e-38
 Identities = 90/142 (63%), Positives = 98/142 (69%)
 Frame = +2

Query: 2   VISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTSEEDETIMRAHSKFGNKWATIARLLSXX 181
           +ISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTSEED+TIMRAH++FGNKWAT        
Sbjct: 37  LISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTSEEDDTIMRAHARFGNKWAT-------- 88

Query: 182 XXXXXXXXXXXXXXXXXXXTIARLLSGRTDNAIKNHWNSTLKRKCCSMIEDGNSNDGFGG 361
                               IARLLSGRTDNAIKNHWNSTLKRKC ++ EDG+    FGG
Sbjct: 89  --------------------IARLLSGRTDNAIKNHWNSTLKRKCSAITEDGS----FGG 124

Query: 362 FEQDRRRQPSLKRSASAGASIP 427
              D    P LKRS SAGA+ P
Sbjct: 125 ---DYPPHP-LKRSVSAGAAAP 142


>gb|AAY28930.1| sucrose responsive element binding protein [Vitis vinifera]
          Length = 312

 Score =  162 bits (409), Expect = 3e-38
 Identities = 90/142 (63%), Positives = 98/142 (69%)
 Frame = +2

Query: 2   VISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTSEEDETIMRAHSKFGNKWATIARLLSXX 181
           +ISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTSEED+TIMRAH++FGNKWAT        
Sbjct: 37  LISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTSEEDDTIMRAHARFGNKWAT-------- 88

Query: 182 XXXXXXXXXXXXXXXXXXXTIARLLSGRTDNAIKNHWNSTLKRKCCSMIEDGNSNDGFGG 361
                               IARLLSGRTDNAIKNHWNSTLKRKC ++ EDG+    FGG
Sbjct: 89  --------------------IARLLSGRTDNAIKNHWNSTLKRKCSAITEDGS----FGG 124

Query: 362 FEQDRRRQPSLKRSASAGASIP 427
              D    P LKRS SAGA+ P
Sbjct: 125 ---DYPPHP-LKRSVSAGAAAP 142


>ref|XP_002310702.1| predicted protein [Populus trichocarpa] gi|222853605|gb|EEE91152.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score =  161 bits (408), Expect = 4e-38
 Identities = 86/144 (59%), Positives = 97/144 (67%), Gaps = 2/144 (1%)
 Frame = +2

Query: 2   VISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTSEEDETIMRAHSKFGNKWATIARLLSXX 181
           +ISKSIPGRSGKSCRLRWCNQLSPQVEHR FT +ED+TI+RAH++FGNKWAT        
Sbjct: 37  LISKSIPGRSGKSCRLRWCNQLSPQVEHRPFTPDEDDTIIRAHARFGNKWAT-------- 88

Query: 182 XXXXXXXXXXXXXXXXXXXTIARLLSGRTDNAIKNHWNSTLKRKCCSMIEDGN--SNDGF 355
                               IARLL GRTDNAIKNHWNSTLKRKC SM EDGN  + +G+
Sbjct: 89  --------------------IARLLYGRTDNAIKNHWNSTLKRKCSSMAEDGNFCNREGY 128

Query: 356 GGFEQDRRRQPSLKRSASAGASIP 427
            G       QP LKRS SAG+ +P
Sbjct: 129 DGNLDGDNTQP-LKRSVSAGSGVP 151


>ref|XP_002524926.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223535761|gb|EEF37423.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 339

 Score =  160 bits (405), Expect = 1e-37
 Identities = 89/147 (60%), Positives = 99/147 (67%), Gaps = 5/147 (3%)
 Frame = +2

Query: 2   VISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTSEEDETIMRAHSKFGNKWATIARLLSXX 181
           +ISKSIPGRSGKSCRLRWCNQLSPQVEHRAFT EEDETI+RAH++FGNKWAT        
Sbjct: 37  LISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDETIIRAHARFGNKWAT-------- 88

Query: 182 XXXXXXXXXXXXXXXXXXXTIARLLSGRTDNAIKNHWNSTLKRKCCSMIE--DGN---SN 346
                               IARLL+GRTDNAIKNHWNSTLKRKCCS+ E  DGN   SN
Sbjct: 89  --------------------IARLLNGRTDNAIKNHWNSTLKRKCCSLDEGYDGNLCCSN 128

Query: 347 DGFGGFEQDRRRQPSLKRSASAGASIP 427
           +     +     QP LKRS SAG+ +P
Sbjct: 129 NNNNNNDSLINTQP-LKRSVSAGSGVP 154


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