BLASTX nr result

ID: Coptis25_contig00023122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023122
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275474.1| PREDICTED: LETM1 and EF-hand domain-containi...    82   7e-26
ref|XP_002315110.1| predicted protein [Populus trichocarpa] gi|2...    81   7e-26
ref|XP_003635110.1| PREDICTED: LETM1 and EF-hand domain-containi...    83   7e-26
emb|CBI23351.3| unnamed protein product [Vitis vinifera]               83   7e-26
ref|XP_002312206.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-25

>ref|XP_002275474.1| PREDICTED: LETM1 and EF-hand domain-containing protein 1,
           mitochondrial [Vitis vinifera]
           gi|296084337|emb|CBI24725.3| unnamed protein product
           [Vitis vinifera]
          Length = 764

 Score = 82.4 bits (202), Expect(2) = 7e-26
 Identities = 41/84 (48%), Positives = 65/84 (77%)
 Frame = +1

Query: 1   EVVDAVGITSMPPGNSLSDKRRKLEFLQKGEEHIRDEEQKEKEQATLKGSGSREEESGTT 180
           EVVD VGIT++P  +S+S++RRKLE+L+  EE I++EE+KE+E+       ++ +E+  +
Sbjct: 507 EVVDTVGITALPSEDSVSERRRKLEYLEMQEELIKEEEEKEEEEQ------AKIKETVVS 560

Query: 181 QEDVALKEMRMPTAKEAQQHAKEK 252
           QED+ALKEM +PTA+EAQ+ A+ +
Sbjct: 561 QEDLALKEMTIPTAREAQEQARAR 584



 Score = 60.8 bits (146), Expect(2) = 7e-26
 Identities = 30/42 (71%), Positives = 35/42 (83%)
 Frame = +3

Query: 243 KRKTLEQQEQLCELSRVLAVLASTSSVCRESEAFLRLVNKEV 368
           + + +E+QEQLCELSR LAVLAS SSV RE E FLRLVNKE+
Sbjct: 582 RARAVEKQEQLCELSRALAVLASASSVSREREEFLRLVNKEI 623


>ref|XP_002315110.1| predicted protein [Populus trichocarpa] gi|222864150|gb|EEF01281.1|
           predicted protein [Populus trichocarpa]
          Length = 658

 Score = 81.3 bits (199), Expect(2) = 7e-26
 Identities = 42/84 (50%), Positives = 64/84 (76%)
 Frame = +1

Query: 1   EVVDAVGITSMPPGNSLSDKRRKLEFLQKGEEHIRDEEQKEKEQATLKGSGSREEESGTT 180
           EVVD VG+T++P  + +S++RRKLEFL+  EE I++EE++E+E+       +R +ES ++
Sbjct: 404 EVVDTVGVTALPSEDLVSERRRKLEFLEMQEELIKEEEEEEEEEQ------ARMKESVSS 457

Query: 181 QEDVALKEMRMPTAKEAQQHAKEK 252
           Q+DVAL+EM +PTA EAQ+ AK K
Sbjct: 458 QKDVALEEMTIPTAGEAQEQAKAK 481



 Score = 62.0 bits (149), Expect(2) = 7e-26
 Identities = 32/42 (76%), Positives = 34/42 (80%)
 Frame = +3

Query: 243 KRKTLEQQEQLCELSRVLAVLASTSSVCRESEAFLRLVNKEV 368
           K KTLE+ EQLCELSR LAVLAS SSV RE E FLRLV KE+
Sbjct: 479 KAKTLEKHEQLCELSRALAVLASASSVSREREEFLRLVKKEI 520


>ref|XP_003635110.1| PREDICTED: LETM1 and EF-hand domain-containing protein 1,
           mitochondrial-like [Vitis vinifera]
          Length = 504

 Score = 83.2 bits (204), Expect(2) = 7e-26
 Identities = 45/85 (52%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1   EVVDAVGITSMPPGNSLSDKRRKLEFLQKGEEHIRDEEQKEKE-QATLKGSGSREEESGT 177
           EVVD VG+T++P  +S+S++RRKLEFL+  EE I++EE+KE+E QA +K       ES  
Sbjct: 247 EVVDTVGVTTLPSEDSVSERRRKLEFLEMQEELIKEEEEKEEEVQARIK-------ESTV 299

Query: 178 TQEDVALKEMRMPTAKEAQQHAKEK 252
            Q+DVAL+EM +PTA+EAQ+ A+ K
Sbjct: 300 NQKDVALEEMTIPTAREAQEQAEAK 324



 Score = 60.1 bits (144), Expect(2) = 7e-26
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = +3

Query: 249 KTLEQQEQLCELSRVLAVLASTSSVCRESEAFLRLVNKEV 368
           KTLE+Q+Q+CELSR L VLAS SSV  E EAFLRLVNKE+
Sbjct: 324 KTLEKQQQICELSRALVVLASASSVSWEREAFLRLVNKEI 363


>emb|CBI23351.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score = 83.2 bits (204), Expect(2) = 7e-26
 Identities = 45/85 (52%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1   EVVDAVGITSMPPGNSLSDKRRKLEFLQKGEEHIRDEEQKEKE-QATLKGSGSREEESGT 177
           EVVD VG+T++P  +S+S++RRKLEFL+  EE I++EE+KE+E QA +K       ES  
Sbjct: 175 EVVDTVGVTTLPSEDSVSERRRKLEFLEMQEELIKEEEEKEEEVQARIK-------ESTV 227

Query: 178 TQEDVALKEMRMPTAKEAQQHAKEK 252
            Q+DVAL+EM +PTA+EAQ+ A+ K
Sbjct: 228 NQKDVALEEMTIPTAREAQEQAEAK 252



 Score = 60.1 bits (144), Expect(2) = 7e-26
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = +3

Query: 249 KTLEQQEQLCELSRVLAVLASTSSVCRESEAFLRLVNKEV 368
           KTLE+Q+Q+CELSR L VLAS SSV  E EAFLRLVNKE+
Sbjct: 252 KTLEKQQQICELSRALVVLASASSVSWEREAFLRLVNKEI 291


>ref|XP_002312206.1| predicted protein [Populus trichocarpa] gi|222852026|gb|EEE89573.1|
           predicted protein [Populus trichocarpa]
          Length = 687

 Score = 80.1 bits (196), Expect(2) = 2e-25
 Identities = 39/84 (46%), Positives = 66/84 (78%)
 Frame = +1

Query: 1   EVVDAVGITSMPPGNSLSDKRRKLEFLQKGEEHIRDEEQKEKEQATLKGSGSREEESGTT 180
           EVVD VG+T++P  +S+S++RRKLE+L+  EE I++EE++E+E+       ++ +ES ++
Sbjct: 429 EVVDTVGVTALPSEDSVSERRRKLEYLEMQEELIKEEEEEEEEEQ------AKMKESVSS 482

Query: 181 QEDVALKEMRMPTAKEAQQHAKEK 252
           Q+DVAL+EM +PTA++A++ AK K
Sbjct: 483 QKDVALEEMSIPTARDAREQAKAK 506



 Score = 62.0 bits (149), Expect(2) = 2e-25
 Identities = 32/42 (76%), Positives = 34/42 (80%)
 Frame = +3

Query: 243 KRKTLEQQEQLCELSRVLAVLASTSSVCRESEAFLRLVNKEV 368
           K KTLE+ EQLCELSR LAVLAS SSV RE E FLRLV KE+
Sbjct: 504 KAKTLEKHEQLCELSRALAVLASASSVSREREEFLRLVKKEI 545


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