BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023110
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30945.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20
emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]   103   1e-20
ref|XP_003593855.1| Pentatricopeptide repeat-containing protein ...   102   4e-20
ref|XP_002531431.1| pentatricopeptide repeat-containing protein,...   100   2e-19

>emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/87 (57%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
 Frame = +1

Query: 217 VLDSFDA--KTSKGNELKVVSREEIRHPLVREVCRLIQFRPSWNPKLEYELKHLLRALKP 390
           VL+SF    + ++G        +E RHPLVRE+CRLI+ R +WNPKLE EL+HLLR+LKP
Sbjct: 136 VLNSFTGGYRQTEGIRRFEGGEDESRHPLVREICRLIELRSAWNPKLEGELRHLLRSLKP 195

Query: 391 QEVCGVLRSQADIRIALSFFYWAYRQW 471
           ++VC VL+ Q D R+AL FFYWA RQW
Sbjct: 196 RQVCAVLQLQTDERVALRFFYWADRQW 222


>ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/87 (57%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
 Frame = +1

Query: 217 VLDSFDA--KTSKGNELKVVSREEIRHPLVREVCRLIQFRPSWNPKLEYELKHLLRALKP 390
           VL+SF    + ++G        +E RHPLVRE+CRLI+ R +WNPKLE EL+HLLR+LKP
Sbjct: 42  VLNSFTGGYRQTEGIRRFEGGEDESRHPLVREICRLIELRSAWNPKLEGELRHLLRSLKP 101

Query: 391 QEVCGVLRSQADIRIALSFFYWAYRQW 471
           ++VC VL+ Q D R+AL FFYWA RQW
Sbjct: 102 RQVCAVLQLQTDERVALRFFYWADRQW 128


>emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/87 (57%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
 Frame = +1

Query: 217 VLDSFDA--KTSKGNELKVVSREEIRHPLVREVCRLIQFRPSWNPKLEYELKHLLRALKP 390
           VL+SF    + ++G        +E RHPLVRE+CRLI+ R +WNPKLE EL+HLLR+LKP
Sbjct: 42  VLNSFTGGYRQTEGIRRFEGGEDESRHPLVREICRLIELRSAWNPKLEGELRHLLRSLKP 101

Query: 391 QEVCGVLRSQADIRIALSFFYWAYRQW 471
           ++VC VL+ Q D R+AL FFYWA RQW
Sbjct: 102 RQVCAVLQLQTDERVALRFFYWADRQW 128


>ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355482903|gb|AES64106.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/90 (54%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
 Frame = +1

Query: 214 QVLDSFDAKTSKGNELKV----VSREEIRHPLVREVCRLIQFRPSWNPKLEYELKHLLRA 381
           + + SFD   S      +    +   E RHP+VREVCRLI  R +WNPK E  L+HLLR+
Sbjct: 102 EFISSFDGNGSNKQRENIARFEIDESEFRHPIVREVCRLISLRSNWNPKFEENLRHLLRS 161

Query: 382 LKPQEVCGVLRSQADIRIALSFFYWAYRQW 471
           L P+ VC VLRSQ D RIAL FFYWA RQW
Sbjct: 162 LNPRLVCAVLRSQDDERIALDFFYWADRQW 191


>ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528950|gb|EEF30943.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 737

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 45/68 (66%), Positives = 55/68 (80%)
 Frame = +1

Query: 268 VSREEIRHPLVREVCRLIQFRPSWNPKLEYELKHLLRALKPQEVCGVLRSQADIRIALSF 447
           +  EE RHPLVREVCRLI+ R +WN KLE +L+ LLR+LKP++VC VL+ Q+D RIAL F
Sbjct: 63  IEEEEFRHPLVREVCRLIERRSAWNAKLEGDLRRLLRSLKPRQVCAVLQLQSDERIALDF 122

Query: 448 FYWAYRQW 471
           FYWA RQW
Sbjct: 123 FYWAGRQW 130