BLASTX nr result

ID: Coptis25_contig00023104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023104
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267645.1| PREDICTED: zinc finger protein ZAT5 [Vitis v...   223   2e-56
emb|CAN59833.1| hypothetical protein VITISV_017619 [Vitis vinifera]   215   4e-54
ref|XP_002274374.1| PREDICTED: zinc finger protein ZAT5 [Vitis v...   214   8e-54
emb|CBI17130.3| unnamed protein product [Vitis vinifera]              199   2e-49
ref|XP_002313544.1| predicted protein [Populus trichocarpa] gi|2...   191   7e-47

>ref|XP_002267645.1| PREDICTED: zinc finger protein ZAT5 [Vitis vinifera]
           gi|147788170|emb|CAN64839.1| hypothetical protein
           VITISV_030377 [Vitis vinifera]
          Length = 276

 Score =  223 bits (568), Expect = 2e-56
 Identities = 117/174 (67%), Positives = 140/174 (80%), Gaps = 3/174 (1%)
 Frame = -2

Query: 563 TTSKA-GFYVYQCKTCNRCFSSFQALGGHRASHKKPKAMVGEKKTLMLLEDD-TQFNNNI 390
           T+SKA GFYVYQCKTC RCF SFQALGGHRASHK+PKA+  EK+T  L+ED+  QFN+N 
Sbjct: 106 TSSKATGFYVYQCKTCYRCFPSFQALGGHRASHKRPKAVTEEKRTWALMEDEYDQFNHNS 165

Query: 389 SSINLQMGNRTSSHTTNKSKVHECSICGSEFSSGQALGGHMRRHRTPTTANMTNSIAMDT 210
           ++++LQ+ NR   ++ NKSKVHECSICG+EFSSGQALGGHMRRHRT T    T  + M T
Sbjct: 166 TALSLQIPNR-GLYSNNKSKVHECSICGAEFSSGQALGGHMRRHRTFTGPPPT--MPMAT 222

Query: 209 IMTESQDTKKPRNALSLDLNLPAPEED-RESKFSFASKQHSLLFSASSLVDCHF 51
              ESQ+ KKPRN L LDLNLPAPE+D RESKF FA+K+ +L+FSAS LVDCH+
Sbjct: 223 SSPESQEAKKPRNILQLDLNLPAPEDDHRESKFPFATKEQALVFSASPLVDCHY 276


>emb|CAN59833.1| hypothetical protein VITISV_017619 [Vitis vinifera]
          Length = 308

 Score =  215 bits (548), Expect = 4e-54
 Identities = 110/183 (60%), Positives = 132/183 (72%), Gaps = 10/183 (5%)
 Frame = -2

Query: 569 TTTTSKAGFYVYQCKTCNRCFSSFQALGGHRASHKKPKAMVGEKK---TLMLLEDDT--- 408
           TTT  KAGFYVY+CKTCNR F SFQALGGHRASHKKPKA+V EKK        +DD    
Sbjct: 126 TTTAGKAGFYVYECKTCNRTFPSFQALGGHRASHKKPKAVVEEKKGPAATAXWDDDYYEE 185

Query: 407 -QFNNNISSINLQMGNRTSSHTTNKSKVHECSICGSEFSSGQALGGHMRRHRTPTTANMT 231
            QFN     ++LQ+GN  + H++NKSKVHECSICGSEFSSGQALGGHMRRHR+ T+  +T
Sbjct: 186 GQFNKISPPLSLQIGNNKALHSSNKSKVHECSICGSEFSSGQALGGHMRRHRSNTSTRIT 245

Query: 230 NSIAMDTIMTESQDTKKPRNALSLDLNLPAPEED---RESKFSFASKQHSLLFSASSLVD 60
            S+    + +     K+PRN L LDLNLPAPE++   R+SKF F S Q  L+FSA +LVD
Sbjct: 246 MSMDAGKMXSHDHHKKEPRNVLPLDLNLPAPEDELHHRDSKFQFTSNQQHLVFSAPALVD 305

Query: 59  CHF 51
           CH+
Sbjct: 306 CHY 308


>ref|XP_002274374.1| PREDICTED: zinc finger protein ZAT5 [Vitis vinifera]
          Length = 296

 Score =  214 bits (545), Expect = 8e-54
 Identities = 110/183 (60%), Positives = 132/183 (72%), Gaps = 10/183 (5%)
 Frame = -2

Query: 569 TTTTSKAGFYVYQCKTCNRCFSSFQALGGHRASHKKPKAMVGEKK---TLMLLEDDT--- 408
           TTT  KAGFYVY+CKTCNR F SFQALGGHRASHKKPKA+V EKK        +DD    
Sbjct: 114 TTTAGKAGFYVYECKTCNRTFPSFQALGGHRASHKKPKAVVEEKKGPAATASWDDDYYEE 173

Query: 407 -QFNNNISSINLQMGNRTSSHTTNKSKVHECSICGSEFSSGQALGGHMRRHRTPTTANMT 231
            QFN     ++LQ+GN  + H++NKSKVHECSICGSEFSSGQALGGHMRRHR+ T+  +T
Sbjct: 174 GQFNKISPPLSLQIGNNKALHSSNKSKVHECSICGSEFSSGQALGGHMRRHRSNTSTRIT 233

Query: 230 NSIAMDTIMTESQDTKKPRNALSLDLNLPAPEED---RESKFSFASKQHSLLFSASSLVD 60
            S+    + +     K+PRN L LDLNLPAPE++   R+SKF F S Q  L+FSA +LVD
Sbjct: 234 MSMDAGKMDSHDHHKKEPRNVLPLDLNLPAPEDELHHRDSKFQFTSNQQHLVFSAPALVD 293

Query: 59  CHF 51
           CH+
Sbjct: 294 CHY 296


>emb|CBI17130.3| unnamed protein product [Vitis vinifera]
          Length = 228

 Score =  199 bits (507), Expect = 2e-49
 Identities = 101/176 (57%), Positives = 122/176 (69%), Gaps = 3/176 (1%)
 Frame = -2

Query: 569 TTTTSKAGFYVYQCKTCNRCFSSFQALGGHRASHKKPKAMVGEKKTLMLLEDDTQFNNNI 390
           TTT  KAGFYVY+CKTCNR F SFQALGGHRASHKKPKA+                    
Sbjct: 72  TTTAGKAGFYVYECKTCNRTFPSFQALGGHRASHKKPKAIS------------------- 112

Query: 389 SSINLQMGNRTSSHTTNKSKVHECSICGSEFSSGQALGGHMRRHRTPTTANMTNSIAMDT 210
             ++LQ+GN  + H++NKSKVHECSICGSEFSSGQALGGHMRRHR+ T+  +T S+    
Sbjct: 113 PPLSLQIGNNKALHSSNKSKVHECSICGSEFSSGQALGGHMRRHRSNTSTRITMSMDAGK 172

Query: 209 IMTESQDTKKPRNALSLDLNLPAPEED---RESKFSFASKQHSLLFSASSLVDCHF 51
           + +     K+PRN L LDLNLPAPE++   R+SKF F S Q  L+FSA +LVDCH+
Sbjct: 173 MDSHDHHKKEPRNVLPLDLNLPAPEDELHHRDSKFQFTSNQQHLVFSAPALVDCHY 228


>ref|XP_002313544.1| predicted protein [Populus trichocarpa] gi|222849952|gb|EEE87499.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  191 bits (485), Expect = 7e-47
 Identities = 105/193 (54%), Positives = 130/193 (67%), Gaps = 22/193 (11%)
 Frame = -2

Query: 563 TTSKAGFYVYQCKTCNRCFSSFQALGGHRASHKKPKAMVGEKKTLMLLE-----DDTQFN 399
           T +KAGF+VY+CKTCNRCF SFQALGGHRASHK+PKA   E+K  +++      DD Q N
Sbjct: 121 TINKAGFFVYECKTCNRCFPSFQALGGHRASHKRPKATAPEEKKGLVVASMEDLDDRQLN 180

Query: 398 NN--ISSINLQMGNRTS---SHTTNKSKVHECSICGSEFSSGQALGGHMRRHRTPTTANM 234
                  ++LQ+ N  +       NK+K+HECSICGSEF SGQALGGHMRRHR  T AN 
Sbjct: 181 KRSPYPCLSLQIPNNNNVNKGFQANKAKIHECSICGSEFMSGQALGGHMRRHRANTGANQ 240

Query: 233 TNSIAMD--TIMTESQ------DTKKPRNALSLDLNLPAPEED----RESKFSFASKQHS 90
            ++I+ D  +  TES+       T KPRN L+LDLNLPAP ED    RESKF  +S Q  
Sbjct: 241 VSNISTDSSSATTESKIHGDHHHTIKPRNMLALDLNLPAPPEDDHHLRESKFQLSSTQQP 300

Query: 89  LLFSASSLVDCHF 51
           L+FS+ +LVDCH+
Sbjct: 301 LVFSSPALVDCHY 313


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