BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023101
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    88   6e-16
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    87   1e-15
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    84   1e-14

>ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|222848975|gb|EEE86522.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/107 (41%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
 Frame = +3

Query: 75  YKTVGFKVLKLDFGAPNKWVEIQSLGNRSLFVGQNXXXXXXXXXXXGCKPNCIYFTDHFW 254
           Y+T+ F + ++DF     WV + SL ++++FVG N           GC+ N +YFTD +W
Sbjct: 357 YRTLLFGLFRMDFDKET-WVSMTSLDDQAVFVGGNHSASVLTCDLPGCEKNSVYFTDDYW 415

Query: 255 SYFKEQG-FGGHDYGIFNLEEASIEKLLYPTDTLMIMPPPIWFAPNP 392
               E   +GGHD G+FNL++ S+ K  Y  D L I PPP WF PNP
Sbjct: 416 ERMNEDYLYGGHDMGVFNLKDKSV-KHFYQLDALKIQPPPCWFLPNP 461


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 50/108 (46%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
 Frame = +3

Query: 75  YKTVGFKVLKLDFGAPNKWVEIQSLGNRSLFVGQNXXXXXXXXXXXGCKPNCIYFTDHFW 254
           Y+T  F+V +LD  AP +W  + SLG+R+LF+G+N           GCK NCIY+TD + 
Sbjct: 285 YRTTRFQVCRLDLKAP-RWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDY- 342

Query: 255 SYFKEQGFGG-HDYGIFNLEEASIEKLLYPTDTLMI-MPPPIWFAPNP 392
           S     G GG  D GIFNLE+ SIE L  P     I  PPP+W  PNP
Sbjct: 343 SEDNYDGIGGEQDLGIFNLEDGSIEPL--PCSHFRIRWPPPLWVTPNP 388


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 50/108 (46%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
 Frame = +3

Query: 75  YKTVGFKVLKLDFGAPNKWVEIQSLGNRSLFVGQNXXXXXXXXXXXGCKPNCIYFTDHFW 254
           Y+T  F+V +LD  AP +W  + SLG+R+LF+G+N           GCK NCIY+TD + 
Sbjct: 285 YRTTRFQVCRLDSKAP-RWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDY- 342

Query: 255 SYFKEQGFGG-HDYGIFNLEEASIEKLLYPTDTLMI-MPPPIWFAPNP 392
           S     G GG  D GIFNLE+ SIE L  P     I  PPP+W  PNP
Sbjct: 343 SEDNYDGIGGEQDLGIFNLEDGSIEPL--PCSHFRIRWPPPLWVTPNP 388


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/109 (40%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
 Frame = +3

Query: 75  YKTVGFKVLKLDFGAPNKWVEIQSLGNRSLFVGQNXXXXXXXXXXXGCKPNCIYFTDHFW 254
           YKT  F+V KLD   P +W  + SLG+  LF+G+N           GC  +CIY+TD + 
Sbjct: 285 YKTARFEVFKLDLNGP-RWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYS 343

Query: 255 SYFKEQGFGGHDYGIFNLEEASIEKL-LYPTDTL--MIMPPPIWFAPNP 392
           +   +   G HD GIF L + SIE L  YP ++   +  PPP+W +PNP
Sbjct: 344 ANNYDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWISPNP 392


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 41/109 (37%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
 Frame = +3

Query: 75  YKTVGFKVLKLDFGAPNKWVEIQSLGNRSLFVGQNXXXXXXXXXXXGCKPNCIYFTDHFW 254
           Y+T+ F+V +LD+  P +W+ + +LG+++LF+G+N           GC  NCIY+TD + 
Sbjct: 290 YRTIRFEVFRLDWNGP-QWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYL 348

Query: 255 SYFKEQGFGGHDYGIFNLEEASIEKL-LYPTD--TLMIMPPPIWFAPNP 392
               +  FG HD GIF L + +IE L  YP +  + +   PP+W +PNP
Sbjct: 349 DANYDGHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSPNP 397