BLASTX nr result

ID: Coptis25_contig00023087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023087
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75214.1| hypothetical protein VITISV_003515 [Vitis vinifera]   129   4e-28
ref|XP_002276503.2| PREDICTED: uncharacterized protein LOC100253...   123   3e-26
emb|CBI26728.3| unnamed protein product [Vitis vinifera]              115   8e-24
ref|XP_002529040.1| Chromosome-associated kinesin KIF4A, putativ...    99   7e-19
ref|XP_003553019.1| PREDICTED: uncharacterized protein LOC100784...    96   6e-18

>emb|CAN75214.1| hypothetical protein VITISV_003515 [Vitis vinifera]
          Length = 1219

 Score =  129 bits (325), Expect = 4e-28
 Identities = 89/241 (36%), Positives = 124/241 (51%), Gaps = 24/241 (9%)
 Frame = -3

Query: 660  IQLDNLRSSGEENFQDAYEETECFQESSFEENSDPIMTNNPSCS---------------- 529
            +QLDNL SS E+  +D+ ++ +     S EENS+  + + P  S                
Sbjct: 503  LQLDNLHSSCEDQSKDSSDDRDSIHFCSLEENSEMDLMSEPDISCQEEGETGEINLEIPQ 562

Query: 528  -------IATCSDIDTDIPIACRKTSSNLDPTIRSSLSLMSCQLPSVLQEPTFSESPKI- 373
                   +AT  D   D+P      S  ++P  RSSLS+ SC+    LQ+PT SESP+I 
Sbjct: 563  KELPHNNMATTMDNPMDVP------SRTMNPASRSSLSISSCRQSPFLQDPTLSESPRIG 616

Query: 372  EKMQKKVKSSSLNVAGAERYVTATSNFSPEVLRQSVKVSDQXXXXXXXXXXXXSPTESLA 193
              ++K +  SS ++A ++   + +   + +VL QSVK SDQ             PTESLA
Sbjct: 617  NSLRKSIIFSSSSLA-SQNNASNSFKLNSDVLHQSVKQSDQIRSSLQSSKVIPGPTESLA 675

Query: 192  ASLHRGLQIIDDHQRXXXXXXXXXXXSFEHLAIKPGQAVNQTDASVQTLSPKQTLIDAPA 13
            ASL RGLQIID HQR           SFEHLA+KP   V + DASVQ    ++  +DAP+
Sbjct: 676  ASLQRGLQIIDYHQRNSASNKSSVAFSFEHLALKPCPEVEKVDASVQKFPEEKPSLDAPS 735

Query: 12   T 10
            T
Sbjct: 736  T 736


>ref|XP_002276503.2| PREDICTED: uncharacterized protein LOC100253712 [Vitis vinifera]
          Length = 1212

 Score =  123 bits (309), Expect = 3e-26
 Identities = 86/240 (35%), Positives = 122/240 (50%), Gaps = 24/240 (10%)
 Frame = -3

Query: 660  IQLDNLRSSGEENFQDAYEETECFQESSFEENSDPIMTNNPSCS---------------- 529
            +QLDNL SS E+  +D+ ++ +     S EENS+  + + P  S                
Sbjct: 521  LQLDNLHSSCEDQSKDSSDDRDSIHFCSLEENSEMDLMSEPDISCQEEGETGEINLEIPQ 580

Query: 528  -------IATCSDIDTDIPIACRKTSSNLDPTIRSSLSLMSCQLPSVLQEPTFSESPKI- 373
                   +AT  D   D+P      S  ++P  RSSLS+ SC+    LQ+PT SESP+I 
Sbjct: 581  KELPHNNMATTMDNPMDVP------SRTMNPASRSSLSISSCRQSPFLQDPTLSESPRIG 634

Query: 372  EKMQKKVKSSSLNVAGAERYVTATSNFSPEVLRQSVKVSDQXXXXXXXXXXXXSPTESLA 193
              ++K +  SS ++A ++   + +   + +VL QS+K SDQ              TESLA
Sbjct: 635  NSLRKSIIFSSSSLA-SQNNASNSFKLNSDVLHQSLKQSDQIRSSLQSSKVIPGTTESLA 693

Query: 192  ASLHRGLQIIDDHQRXXXXXXXXXXXSFEHLAIKPGQAVNQTDASVQTLSPKQTLIDAPA 13
            ASL RGLQIID HQR           SFEHLA+KP   V + DASVQ    ++  +DAP+
Sbjct: 694  ASLQRGLQIIDYHQRNSASNKSSVAFSFEHLALKPCPEVEKVDASVQKFPEEKPSLDAPS 753


>emb|CBI26728.3| unnamed protein product [Vitis vinifera]
          Length = 1174

 Score =  115 bits (288), Expect = 8e-24
 Identities = 81/218 (37%), Positives = 114/218 (52%), Gaps = 2/218 (0%)
 Frame = -3

Query: 660  IQLDNLRSSGEENFQDAYEETECFQESSFEE-NSDPIMTNNPSCSIATCSDIDTDIPIAC 484
            +QLDNL  + E +      +  C +E    E N +      P  ++AT  D   D+P   
Sbjct: 521  LQLDNLHKNSEMDLMSE-PDISCQEEGETGEINLEIPQKELPHNNMATTMDNPMDVP--- 576

Query: 483  RKTSSNLDPTIRSSLSLMSCQLPSVLQEPTFSESPKI-EKMQKKVKSSSLNVAGAERYVT 307
               S  ++P  RSSLS+ SC+    LQ+PT SESP+I   ++K +  SS ++A ++   +
Sbjct: 577  ---SRTMNPASRSSLSISSCRQSPFLQDPTLSESPRIGNSLRKSIIFSSSSLA-SQNNAS 632

Query: 306  ATSNFSPEVLRQSVKVSDQXXXXXXXXXXXXSPTESLAASLHRGLQIIDDHQRXXXXXXX 127
             +   + +VL QS+K SDQ              TESLAASL RGLQIID HQR       
Sbjct: 633  NSFKLNSDVLHQSLKQSDQIRSSLQSSKVIPGTTESLAASLQRGLQIIDYHQRNSASNKS 692

Query: 126  XXXXSFEHLAIKPGQAVNQTDASVQTLSPKQTLIDAPA 13
                SFEHLA+KP   V + DASVQ    ++  +DAP+
Sbjct: 693  SVAFSFEHLALKPCPEVEKVDASVQKFPEEKPSLDAPS 730


>ref|XP_002529040.1| Chromosome-associated kinesin KIF4A, putative [Ricinus communis]
            gi|223531520|gb|EEF33351.1| Chromosome-associated kinesin
            KIF4A, putative [Ricinus communis]
          Length = 1183

 Score = 99.0 bits (245), Expect = 7e-19
 Identities = 82/226 (36%), Positives = 107/226 (47%), Gaps = 9/226 (3%)
 Frame = -3

Query: 657  QLDNLRSSGEENFQDAYEETECFQ----ESSFEENSDPIMTNNPSCSIATCSDIDTDIPI 490
            QL  L SS EEN +D  +          + SFE +S      N    I    + D +I +
Sbjct: 518  QLKKLHSSCEENLKDLSDTRNSSHFASVDESFETDSMSEDEVNGPGEIQKEGE-DEEINL 576

Query: 489  ACRKTS-----SNLDPTIRSSLSLMSCQLPSVLQEPTFSESPKIEKMQKKVKSSSLNVAG 325
               K S     S       SSLS+  C+   VLQEPT SESPKI   ++ +  SS   A 
Sbjct: 577  GIHKESEEDLLSTSKADSASSLSISLCRQSPVLQEPTLSESPKIGNTRRSIAISSAFSAS 636

Query: 324  AERYVTATSNFSPEVLRQSVKVSDQXXXXXXXXXXXXSPTESLAASLHRGLQIIDDHQRX 145
             +  V+ ++NF  EV  QS+K S+              PTESLAASL RGLQIID HQ+ 
Sbjct: 637  QDG-VSQSANFKSEVF-QSLKQSEHIRSSLRSSKLFLGPTESLAASLQRGLQIIDHHQQN 694

Query: 144  XXXXXXXXXXSFEHLAIKPGQAVNQTDASVQTLSPKQTLIDAPATY 7
                      SFEHLA+KP   V++  AS+Q L+      D  + Y
Sbjct: 695  SASNRSSVAFSFEHLALKPCAEVDRAYASIQKLAEDAPSSDGSSAY 740


>ref|XP_003553019.1| PREDICTED: uncharacterized protein LOC100784708 [Glycine max]
          Length = 1122

 Score = 95.9 bits (237), Expect = 6e-18
 Identities = 74/221 (33%), Positives = 106/221 (47%), Gaps = 4/221 (1%)
 Frame = -3

Query: 657  QLDNLRSSGEENFQDAYEETECFQESSFEENSDPIMTNNPSCSIATCSDIDTDIPIACRK 478
            Q+D L +S E N +D   + +C Q  S EE  D    +  SC     +D+       C K
Sbjct: 502  QIDELDNSSEGNPKDISVDEDCVQFYSDEEYCD---ADTNSCDEVEKADV------YCGK 552

Query: 477  TSSN----LDPTIRSSLSLMSCQLPSVLQEPTFSESPKIEKMQKKVKSSSLNVAGAERYV 310
            T SN     + + R S+SL SC   + L  P  SESPK  K Q++  + S +  G+   V
Sbjct: 553  TLSNPSVATESSFRDSISLNSCNHSATLAGPQLSESPKFSKTQRRSVAISSSYLGSWNNV 612

Query: 309  TATSNFSPEVLRQSVKVSDQXXXXXXXXXXXXSPTESLAASLHRGLQIIDDHQRXXXXXX 130
              +S FS +VLR+S K  D             S  +SLAASL +GLQIID HQ+      
Sbjct: 613  AESSTFSNKVLRKSFKQGDH-----VQSSLQSSKAKSLAASLQKGLQIIDYHQQNSALNK 667

Query: 129  XXXXXSFEHLAIKPGQAVNQTDASVQTLSPKQTLIDAPATY 7
                 SFEHL + P   +++ D+  QT+  K +  +  A +
Sbjct: 668  SSTSFSFEHLTLTPCLDIDKDDSYDQTIQQKPSSDEVTAAF 708


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