BLASTX nr result

ID: Coptis25_contig00023074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023074
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002442280.1| hypothetical protein SORBIDRAFT_08g017406 [S...    70   2e-10
gb|AAD22703.1| putative TNP2-like transposon protein [Arabidopsi...    70   2e-10
gb|AAD38214.1|AF147265_1 similar to Arabidopsis thaliana putativ...    69   4e-10
ref|XP_002449314.1| hypothetical protein SORBIDRAFT_05g007803 [S...    69   5e-10
ref|XP_002455458.1| hypothetical protein SORBIDRAFT_03g011155 [S...    68   9e-10

>ref|XP_002442280.1| hypothetical protein SORBIDRAFT_08g017406 [Sorghum bicolor]
           gi|241942973|gb|EES16118.1| hypothetical protein
           SORBIDRAFT_08g017406 [Sorghum bicolor]
          Length = 723

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/61 (54%), Positives = 43/61 (70%)
 Frame = +1

Query: 67  FLKQSIFSKLLPYWEELPVPRNIDVMHTKKNVCEILIALMLDTKKTKDDFNARKDLKLLG 246
           F KQSIF + LPYW +L VP  ID MH +KNV E LIA ++DT K+KD   AR+D++ L 
Sbjct: 475 FKKQSIFFQYLPYWPQLEVPHAIDSMHVQKNVFESLIATLMDTPKSKDGLKARRDMEQLK 534

Query: 247 I 249
           +
Sbjct: 535 V 535


>gb|AAD22703.1| putative TNP2-like transposon protein [Arabidopsis thaliana]
          Length = 619

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/71 (47%), Positives = 48/71 (67%)
 Frame = +1

Query: 73  KQSIFSKLLPYWEELPVPRNIDVMHTKKNVCEILIALMLDTKKTKDDFNARKDLKLLGIK 252
           K+SIF  L PYWE+LPV  N+DVMHT+KNV   +++ +L   K+KD  NARKDL+ LG++
Sbjct: 399 KRSIFFTL-PYWEDLPVRHNLDVMHTEKNVAHSIVSTLLHCGKSKDGLNARKDLQHLGLR 457

Query: 253 KKYWVTDNNRK 285
                T   ++
Sbjct: 458 HALHPTTQGKR 468


>gb|AAD38214.1|AF147265_1 similar to Arabidopsis thaliana putative En/Spm transposon protein
           (GB:AC005396) [Arabidopsis thaliana]
           gi|7267373|emb|CAB77934.1| putative transposon protein
           [Arabidopsis thaliana]
          Length = 569

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/61 (55%), Positives = 46/61 (75%)
 Frame = +1

Query: 73  KQSIFSKLLPYWEELPVPRNIDVMHTKKNVCEILIALMLDTKKTKDDFNARKDLKLLGIK 252
           K+SIF KL PYW+EL V  N+DVMH ++NV   +I+ +L   K+KD  NARKDL++LGI+
Sbjct: 476 KKSIFFKL-PYWQELLVRHNLDVMHVERNVAASIISTLLHCWKSKDGLNARKDLEVLGIR 534

Query: 253 K 255
           K
Sbjct: 535 K 535


>ref|XP_002449314.1| hypothetical protein SORBIDRAFT_05g007803 [Sorghum bicolor]
           gi|241935157|gb|EES08302.1| hypothetical protein
           SORBIDRAFT_05g007803 [Sorghum bicolor]
          Length = 686

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/61 (54%), Positives = 42/61 (68%)
 Frame = +1

Query: 67  FLKQSIFSKLLPYWEELPVPRNIDVMHTKKNVCEILIALMLDTKKTKDDFNARKDLKLLG 246
           F KQSIF + LPYW +L VP  ID MH +KNV E LIA ++DT K+KD   AR+D + L 
Sbjct: 524 FKKQSIFFQYLPYWPQLEVPHAIDSMHVQKNVFESLIATLMDTPKSKDGLKARRDKEQLK 583

Query: 247 I 249
           +
Sbjct: 584 V 584


>ref|XP_002455458.1| hypothetical protein SORBIDRAFT_03g011155 [Sorghum bicolor]
           gi|241927433|gb|EES00578.1| hypothetical protein
           SORBIDRAFT_03g011155 [Sorghum bicolor]
          Length = 835

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/61 (52%), Positives = 42/61 (68%)
 Frame = +1

Query: 67  FLKQSIFSKLLPYWEELPVPRNIDVMHTKKNVCEILIALMLDTKKTKDDFNARKDLKLLG 246
           F KQSIF + LPYW +L VP  ID MH +KNV E LIA ++DT K+ D   AR+D++ L 
Sbjct: 411 FKKQSIFFQYLPYWPQLEVPHAIDSMHVQKNVFESLIATLMDTPKSMDGLKARRDMEQLK 470

Query: 247 I 249
           +
Sbjct: 471 V 471


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