BLASTX nr result

ID: Coptis25_contig00023073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023073
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140790.1| PREDICTED: uncharacterized protein LOC101219...   137   1e-30
ref|XP_002510838.1| conserved hypothetical protein [Ricinus comm...   135   4e-30
ref|XP_002322447.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
gb|AFK46048.1| unknown [Lotus japonicus]                              128   4e-28
ref|XP_003548220.1| PREDICTED: uncharacterized protein LOC100817...   128   4e-28

>ref|XP_004140790.1| PREDICTED: uncharacterized protein LOC101219803 [Cucumis sativus]
           gi|449530412|ref|XP_004172189.1| PREDICTED:
           uncharacterized LOC101219803 [Cucumis sativus]
          Length = 288

 Score =  137 bits (344), Expect = 1e-30
 Identities = 80/121 (66%), Positives = 89/121 (73%), Gaps = 5/121 (4%)
 Frame = +3

Query: 99  ISPLHFPSQFRANTSNKITRTKRKKL--SISVSLNDVKEQ-DQQLNLSVLRFTLGIRGLD 269
           IS +  PS     TS    R K K    +IS  L+D K   +QQLNLSVLRFTLGI GLD
Sbjct: 2   ISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLD 61

Query: 270 ESNLPRWIGYTFGSLLFLNHFIGSYSP--TTPAQLRSEAMGLSLAAFSIAIPYLGKFLKG 443
           ES LPRWIGY FGSLL LNHF+GS S   TTPAQLR+EA+G+SLAAFSIA+PYLGKFLKG
Sbjct: 62  ESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPYLGKFLKG 121

Query: 444 A 446
           A
Sbjct: 122 A 122


>ref|XP_002510838.1| conserved hypothetical protein [Ricinus communis]
           gi|223549953|gb|EEF51440.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 308

 Score =  135 bits (339), Expect = 4e-30
 Identities = 76/123 (61%), Positives = 89/123 (72%), Gaps = 3/123 (2%)
 Frame = +3

Query: 99  ISPLHFPSQFRANTSNKITRTKRKKLSISVSLNDV---KEQDQQLNLSVLRFTLGIRGLD 269
           I+PL    +FRAN S      K K  SI V +++    K+Q Q LNLSVLRFT GI GLD
Sbjct: 6   INPLITHPKFRANNS-----VKSKNASIIVRIDNSQRKKDQQQDLNLSVLRFTFGIPGLD 60

Query: 270 ESNLPRWIGYTFGSLLFLNHFIGSYSPTTPAQLRSEAMGLSLAAFSIAIPYLGKFLKGAP 449
           ES LPRWIGY FGSLL LNHF+GS S T+  Q+R+EA+GLSLAAFSIA+PY G+FLKGA 
Sbjct: 61  ESYLPRWIGYGFGSLLVLNHFLGSNSVTSLPQMRTEALGLSLAAFSIALPYFGRFLKGAT 120

Query: 450 LVD 458
            VD
Sbjct: 121 PVD 123


>ref|XP_002322447.1| predicted protein [Populus trichocarpa] gi|222869443|gb|EEF06574.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score =  129 bits (323), Expect = 3e-28
 Identities = 71/114 (62%), Positives = 82/114 (71%), Gaps = 2/114 (1%)
 Frame = +3

Query: 123 QFRANTSNKITRTKRKKLSISVSLNDVKEQ--DQQLNLSVLRFTLGIRGLDESNLPRWIG 296
           QFRA  +       RK ++I  S ++ + Q   QQLNLSVLRFT GI GLDES LPRWIG
Sbjct: 1   QFRAKKT-------RKSIAIHASSDNPQSQRQQQQLNLSVLRFTFGIPGLDESYLPRWIG 53

Query: 297 YTFGSLLFLNHFIGSYSPTTPAQLRSEAMGLSLAAFSIAIPYLGKFLKGAPLVD 458
           Y FGSLL LNHF+GS   TT AQLR+E +GLSLAAFS A+PY G+FLKGA  VD
Sbjct: 54  YGFGSLLILNHFLGSNPDTTQAQLRTEVLGLSLAAFSAALPYFGRFLKGATPVD 107


>gb|AFK46048.1| unknown [Lotus japonicus]
          Length = 222

 Score =  128 bits (322), Expect = 4e-28
 Identities = 78/131 (59%), Positives = 87/131 (66%), Gaps = 3/131 (2%)
 Frame = +3

Query: 75  MNTLISNWISPLHFPSQ--FRANTSNKITRTKRKKLSISVSLNDVKEQDQQLNLSVLRFT 248
           MN L S    P   PS+  +   +S K T T R  L      N    Q QQLNLSVLRFT
Sbjct: 1   MNCLSSICFKPC-VPSKVLYPRTSSTKFTTTVRASLQDPQPPNT--SQQQQLNLSVLRFT 57

Query: 249 LGIRGLDESNLPRWIGYTFGSLLFLNHFIGSYSPT-TPAQLRSEAMGLSLAAFSIAIPYL 425
           LGI G DES LPRWIGY FGSLL LNHF+GS S T TPAQL +E +G+SLA+FSI +PYL
Sbjct: 58  LGIPGFDESYLPRWIGYGFGSLLLLNHFLGSDSATVTPAQLSTEVLGMSLASFSIVLPYL 117

Query: 426 GKFLKGAPLVD 458
           GKFLKGA  VD
Sbjct: 118 GKFLKGAQPVD 128


>ref|XP_003548220.1| PREDICTED: uncharacterized protein LOC100817953 [Glycine max]
          Length = 287

 Score =  128 bits (322), Expect = 4e-28
 Identities = 72/110 (65%), Positives = 83/110 (75%), Gaps = 9/110 (8%)
 Frame = +3

Query: 156 RTKRKKLSISV---SLNDVKEQDQQ-----LNLSVLRFTLGIRGLDESNLPRWIGYTFGS 311
           RT  +K  +++   SL D ++Q QQ     LNLSVLRFTLGI GLDES LPRWIGY FGS
Sbjct: 18  RTSFRKFPLTIPRFSLQDSQQQQQQQQQQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGS 77

Query: 312 LLFLNHFIGSYSPT-TPAQLRSEAMGLSLAAFSIAIPYLGKFLKGAPLVD 458
           LL LNHF+GS S T TPAQL +E +GLSLA+FSI +PYLGKFLKGA  VD
Sbjct: 78  LLLLNHFLGSDSATVTPAQLSTEVLGLSLASFSIVLPYLGKFLKGAQPVD 127


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