BLASTX nr result

ID: Coptis25_contig00023060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023060
         (1755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280167.1| PREDICTED: origin recognition complex subuni...   426   e-147
emb|CBI26946.3| unnamed protein product [Vitis vinifera]              412   e-143
ref|XP_004158973.1| PREDICTED: origin recognition complex subuni...   401   e-139
ref|XP_002312422.1| predicted protein [Populus trichocarpa] gi|2...   399   e-137
ref|XP_002526317.1| origin recognition complex subunit, putative...   402   e-133

>ref|XP_002280167.1| PREDICTED: origin recognition complex subunit 4-like [Vitis vinifera]
          Length = 418

 Score =  426 bits (1095), Expect(2) = e-147
 Identities = 212/281 (75%), Positives = 242/281 (86%)
 Frame = -3

Query: 1459 EYGLAHKTVVFVLDEFDLFTRGKQRLLYSLLDAMQSVTSQAVVIGVSCRLDADQLLEKRV 1280
            E GLAHKT++FVLDEFD FT+GKQRLLYSLLDAMQSVTSQAVVIGVSCRLDADQLLEKRV
Sbjct: 136  ECGLAHKTIIFVLDEFDFFTQGKQRLLYSLLDAMQSVTSQAVVIGVSCRLDADQLLEKRV 195

Query: 1279 RSRFSHRKLLFLPPSKEDMQRLIKHVLALPEDSTFPHGYAVTFNAKFHSICGDERFVEIL 1100
            RSRFSHRK+LFLPPSKED+QR   H+ +LP D++ P+ YAV FN K H I  DERF EI+
Sbjct: 196  RSRFSHRKVLFLPPSKEDLQRYFLHIFSLPVDTSLPNDYAVEFNMKLHHILADERFKEII 255

Query: 1099 DTLSDADSSVHHLLNFLFLGVCNMNLEYGFLSVENFKTALLSIQRPYKLEILQGCSVLEL 920
            +TL ++DS+V HLL FLF  VC+M+LE GFLS++NF+TA+ SIQR  K+E LQ CS+LEL
Sbjct: 256  NTLLNSDSTVKHLLRFLFYAVCHMDLESGFLSLDNFRTAMSSIQRQPKMEYLQDCSILEL 315

Query: 919  YILACMKRLEDKEQNSYNFNSVMIEYKDIHDSYRISDYYARNVFLRAFEHLLQRELISFT 740
            YIL CMKRLE KEQNSYNFNSVM EYK IHD+Y+ SDYYARNV LRAFEHL+QRELI F 
Sbjct: 316  YILVCMKRLEVKEQNSYNFNSVMKEYKGIHDAYQTSDYYARNVCLRAFEHLVQRELICFM 375

Query: 739  DNRGQNQSIEFRPVKLLISSQELHQGLKSYRSCPALLQKLM 617
            DNRG NQSIEFR VKLLISS EL+QGLKSYRSCP +L+KL+
Sbjct: 376  DNRGNNQSIEFRAVKLLISSHELYQGLKSYRSCPVILRKLV 416



 Score =  124 bits (310), Expect(2) = e-147
 Identities = 59/82 (71%), Positives = 73/82 (89%)
 Frame = -2

Query: 1706 KLKFIVSNSVTEGCNNSVLLLGPRGCGQIEVLDLVLGDLKAEYPDIISVVRLDGVLHYDD 1527
            KLKFI+S+SVTE CNNS+LLLGPRG G+  VL+LV+ DL AE+ D+ISV+RL+G+LH DD
Sbjct: 39   KLKFIISSSVTEACNNSILLLGPRGSGKTAVLELVIRDLLAEHADMISVIRLNGLLHSDD 98

Query: 1526 NCSLKEIARQLCSENQLLFSKM 1461
            NC++KEIARQLC E+QLLFSKM
Sbjct: 99   NCAVKEIARQLCVEHQLLFSKM 120


>emb|CBI26946.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score =  412 bits (1059), Expect(2) = e-143
 Identities = 210/282 (74%), Positives = 239/282 (84%), Gaps = 8/282 (2%)
 Frame = -3

Query: 1459 EYGLAHKTVVFVLDEFDLFTR-------GKQRLLYSLLDAMQSVTSQAVVIGVSCRLDAD 1301
            E GLAHKT++FVLDEFD FT+       GKQRLLYSLLDAMQSVTSQAVVIGVSCRLDAD
Sbjct: 136  ECGLAHKTIIFVLDEFDFFTQARLPLSHGKQRLLYSLLDAMQSVTSQAVVIGVSCRLDAD 195

Query: 1300 QLLEKRVRSRFSHRKLLFLPPSKEDMQRLIKHVLALPEDSTFPHGYAVTFNAKFHSICGD 1121
            QLLEKRVRSRFSHRK+LFLPPSKED+QRL++H+ +LP D++ P+ YAV FN K H I  D
Sbjct: 196  QLLEKRVRSRFSHRKVLFLPPSKEDLQRLLEHIFSLPVDTSLPNDYAVEFNMKLHHILAD 255

Query: 1120 ERFVEILDTLSDADSSVHHLLNFLFLGVCNMNLEYGFLSVENFKTALLSIQRPYKLEILQ 941
            ERF EI++TL ++DS+V HLL FLF  VC+M+LE GFLS++NF+TA+ SIQR  K+E LQ
Sbjct: 256  ERFKEIINTLLNSDSTVKHLLRFLFYAVCHMDLESGFLSLDNFRTAMSSIQRQPKMEYLQ 315

Query: 940  G-CSVLELYILACMKRLEDKEQNSYNFNSVMIEYKDIHDSYRISDYYARNVFLRAFEHLL 764
              CS+LELYIL CMKRLE KEQNSYNFNSVM EYK IHD+Y+ SDYYARNV LRAFEHL+
Sbjct: 316  ADCSILELYILVCMKRLEVKEQNSYNFNSVMKEYKGIHDAYQTSDYYARNVCLRAFEHLV 375

Query: 763  QRELISFTDNRGQNQSIEFRPVKLLISSQELHQGLKSYRSCP 638
            QRELI F DNRG NQSIEFR VKLLISS EL+QGLKSYRSCP
Sbjct: 376  QRELICFMDNRGNNQSIEFRAVKLLISSHELYQGLKSYRSCP 417



 Score =  124 bits (310), Expect(2) = e-143
 Identities = 59/82 (71%), Positives = 73/82 (89%)
 Frame = -2

Query: 1706 KLKFIVSNSVTEGCNNSVLLLGPRGCGQIEVLDLVLGDLKAEYPDIISVVRLDGVLHYDD 1527
            KLKFI+S+SVTE CNNS+LLLGPRG G+  VL+LV+ DL AE+ D+ISV+RL+G+LH DD
Sbjct: 39   KLKFIISSSVTEACNNSILLLGPRGSGKTAVLELVIRDLLAEHADMISVIRLNGLLHSDD 98

Query: 1526 NCSLKEIARQLCSENQLLFSKM 1461
            NC++KEIARQLC E+QLLFSKM
Sbjct: 99   NCAVKEIARQLCVEHQLLFSKM 120


>ref|XP_004158973.1| PREDICTED: origin recognition complex subunit 4-like [Cucumis
            sativus]
          Length = 418

 Score =  401 bits (1031), Expect(2) = e-139
 Identities = 195/281 (69%), Positives = 234/281 (83%)
 Frame = -3

Query: 1459 EYGLAHKTVVFVLDEFDLFTRGKQRLLYSLLDAMQSVTSQAVVIGVSCRLDADQLLEKRV 1280
            E GLAHKT+VFVLDEFDLF +GKQRLLYSLLDAMQSV+SQA+VIG+SCRLDADQLLEKRV
Sbjct: 137  ECGLAHKTIVFVLDEFDLFAQGKQRLLYSLLDAMQSVSSQAIVIGISCRLDADQLLEKRV 196

Query: 1279 RSRFSHRKLLFLPPSKEDMQRLIKHVLALPEDSTFPHGYAVTFNAKFHSICGDERFVEIL 1100
            RSRFSHRKLLFLPP KE+++RL++H+L+LP DS  PH Y + FNAK H++  +ERF +++
Sbjct: 197  RSRFSHRKLLFLPPCKENVERLLEHILSLPIDSDLPHDYIIKFNAKLHNMLANERFKKVI 256

Query: 1099 DTLSDADSSVHHLLNFLFLGVCNMNLEYGFLSVENFKTALLSIQRPYKLEILQGCSVLEL 920
             T  D+DS+V   + +LF  +  +NL+ G L+VENF+ AL   QR  K E ++ CS+LEL
Sbjct: 257  STYLDSDSTVKQFVRYLFCAISKLNLKSGLLTVENFEHALSDTQRQPKQEYIKDCSILEL 316

Query: 919  YILACMKRLEDKEQNSYNFNSVMIEYKDIHDSYRISDYYARNVFLRAFEHLLQRELISFT 740
            YIL CMKRLE KEQNSYNFNSVM EYK IHDS+R SDYY+R+V LRAFEHLLQRELI F 
Sbjct: 317  YILVCMKRLEVKEQNSYNFNSVMKEYKSIHDSFRTSDYYSRSVCLRAFEHLLQRELICFA 376

Query: 739  DNRGQNQSIEFRPVKLLISSQELHQGLKSYRSCPALLQKLM 617
            DNRG NQSIEFRP KLLI++ ELH GLK+YRSCP++LQKLM
Sbjct: 377  DNRGHNQSIEFRPAKLLITAHELHHGLKAYRSCPSILQKLM 417



 Score =  123 bits (308), Expect(2) = e-139
 Identities = 60/82 (73%), Positives = 71/82 (86%)
 Frame = -2

Query: 1706 KLKFIVSNSVTEGCNNSVLLLGPRGCGQIEVLDLVLGDLKAEYPDIISVVRLDGVLHYDD 1527
            KLKFI+S+SVTE CNNS+LLLGPRG G++ VL+LVL DL  EYPD+I+V+RL G+LH DD
Sbjct: 40   KLKFIISSSVTEACNNSILLLGPRGSGKMAVLELVLQDLLLEYPDMITVIRLSGLLHCDD 99

Query: 1526 NCSLKEIARQLCSENQLLFSKM 1461
            N + KEIARQLCSE QLLFSKM
Sbjct: 100  NGAFKEIARQLCSEYQLLFSKM 121


>ref|XP_002312422.1| predicted protein [Populus trichocarpa] gi|222852242|gb|EEE89789.1|
            predicted protein [Populus trichocarpa]
          Length = 431

 Score =  399 bits (1024), Expect(2) = e-137
 Identities = 199/274 (72%), Positives = 229/274 (83%)
 Frame = -3

Query: 1459 EYGLAHKTVVFVLDEFDLFTRGKQRLLYSLLDAMQSVTSQAVVIGVSCRLDADQLLEKRV 1280
            E GLAHKTV+F LDEFDLF +GKQRLLYSLLDAMQSVTSQAVV+GVSCRLDADQLLEKRV
Sbjct: 135  ECGLAHKTVIFALDEFDLFAQGKQRLLYSLLDAMQSVTSQAVVVGVSCRLDADQLLEKRV 194

Query: 1279 RSRFSHRKLLFLPPSKEDMQRLIKHVLALPEDSTFPHGYAVTFNAKFHSICGDERFVEIL 1100
            RSRFSHRKLLFLPPSKED+QRL++H+L+LP DS+  H YA  FN K  SI  DERF EI+
Sbjct: 195  RSRFSHRKLLFLPPSKEDVQRLLEHILSLPMDSSLAHDYAAEFNEKLQSILADERFKEII 254

Query: 1099 DTLSDADSSVHHLLNFLFLGVCNMNLEYGFLSVENFKTALLSIQRPYKLEILQGCSVLEL 920
                +++S+ +HLL FLF+ + NM L+ GFLS+ENFK AL SIQR  K E ++ CS+LEL
Sbjct: 255  SNYLNSNSTTNHLLRFLFIAISNMELKSGFLSLENFKAALSSIQRQPKQECIKDCSILEL 314

Query: 919  YILACMKRLEDKEQNSYNFNSVMIEYKDIHDSYRISDYYARNVFLRAFEHLLQRELISFT 740
            YIL CMKRLE +EQNSYNF+SVM EYK IHDS+  SDYYA+NV LRAFEHLLQRELI FT
Sbjct: 315  YILVCMKRLEIREQNSYNFSSVMKEYKSIHDSFPTSDYYAQNVCLRAFEHLLQRELICFT 374

Query: 739  DNRGQNQSIEFRPVKLLISSQELHQGLKSYRSCP 638
            DNRG +QSIEFR VKL++S  EL +GLKSYRSCP
Sbjct: 375  DNRGHSQSIEFRQVKLVVSYAELQEGLKSYRSCP 408



 Score =  118 bits (295), Expect(2) = e-137
 Identities = 55/82 (67%), Positives = 69/82 (84%)
 Frame = -2

Query: 1706 KLKFIVSNSVTEGCNNSVLLLGPRGCGQIEVLDLVLGDLKAEYPDIISVVRLDGVLHYDD 1527
            KLKFI+S+S+ E CNNS+LLLGPRG G++ VL+LVL DL  EYPD I+V+RL+G+LH +D
Sbjct: 38   KLKFIISSSIMEACNNSILLLGPRGSGKVAVLELVLSDLLEEYPDTITVIRLNGLLHSED 97

Query: 1526 NCSLKEIARQLCSENQLLFSKM 1461
            N + KEIARQLC E+ LLFSKM
Sbjct: 98   NSAFKEIARQLCMEHHLLFSKM 119


>ref|XP_002526317.1| origin recognition complex subunit, putative [Ricinus communis]
            gi|223534398|gb|EEF36106.1| origin recognition complex
            subunit, putative [Ricinus communis]
          Length = 370

 Score =  402 bits (1034), Expect(2) = e-133
 Identities = 199/281 (70%), Positives = 236/281 (83%)
 Frame = -3

Query: 1459 EYGLAHKTVVFVLDEFDLFTRGKQRLLYSLLDAMQSVTSQAVVIGVSCRLDADQLLEKRV 1280
            E GLAHKT++F+LDEFDLF +GKQRLLYSLLDAMQSVTSQA+VIGVSCRLDADQLLEKRV
Sbjct: 88   ECGLAHKTIIFILDEFDLFAQGKQRLLYSLLDAMQSVTSQAIVIGVSCRLDADQLLEKRV 147

Query: 1279 RSRFSHRKLLFLPPSKEDMQRLIKHVLALPEDSTFPHGYAVTFNAKFHSICGDERFVEIL 1100
            RSRFSHRKLLFLPPS  D++RL++H+L+LP DS+FPH Y   FN K H+I  DERF EI+
Sbjct: 148  RSRFSHRKLLFLPPSMVDVERLLEHLLSLPMDSSFPHDYTTQFNGKLHNILADERFKEIV 207

Query: 1099 DTLSDADSSVHHLLNFLFLGVCNMNLEYGFLSVENFKTALLSIQRPYKLEILQGCSVLEL 920
             T  +++ +V+HLL FLF+ +    L+ GF S+ENFK+AL S++R  K E ++ CS+LEL
Sbjct: 208  ATYLNSNYTVNHLLKFLFVAISKWELKSGFPSLENFKSALSSMRRQPKQECIRDCSILEL 267

Query: 919  YILACMKRLEDKEQNSYNFNSVMIEYKDIHDSYRISDYYARNVFLRAFEHLLQRELISFT 740
            Y+L CMKRLE KEQ+SYNFNSVM EYK IHDS++ SDYYARNV LRAFE LLQRELI F 
Sbjct: 268  YLLVCMKRLEVKEQSSYNFNSVMKEYKSIHDSFQTSDYYARNVCLRAFERLLQRELICFM 327

Query: 739  DNRGQNQSIEFRPVKLLISSQELHQGLKSYRSCPALLQKLM 617
            DNRGQNQS+EFRPVKLLIS  EL +GLKSYRSCP +LQKL+
Sbjct: 328  DNRGQNQSVEFRPVKLLISYAELQEGLKSYRSCPTILQKLI 368



 Score =  100 bits (249), Expect(2) = e-133
 Identities = 47/70 (67%), Positives = 58/70 (82%)
 Frame = -2

Query: 1673 EGCNNSVLLLGPRGCGQIEVLDLVLGDLKAEYPDIISVVRLDGVLHYDDNCSLKEIARQL 1494
            E CNNS+LLLGPRG G+I VL+LVL DL  E+PD IS+V+L+G+LH D+ C+ KEIARQL
Sbjct: 2    EACNNSILLLGPRGSGKIAVLELVLNDLLQEHPDTISIVKLNGLLHSDEICAFKEIARQL 61

Query: 1493 CSENQLLFSK 1464
            C E+ LLFSK
Sbjct: 62   CMEHHLLFSK 71


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