BLASTX nr result

ID: Coptis25_contig00023055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023055
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301410.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_002263519.1| PREDICTED: uncharacterized membrane protein ...   114   8e-24
emb|CAN71954.1| hypothetical protein VITISV_024312 [Vitis vinifera]   114   8e-24
ref|XP_002876638.1| hypothetical protein ARALYDRAFT_907735 [Arab...   111   7e-23
emb|CAB71107.1| putative protein [Arabidopsis thaliana]               110   1e-22

>ref|XP_002301410.1| predicted protein [Populus trichocarpa] gi|222843136|gb|EEE80683.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score =  114 bits (286), Expect = 6e-24
 Identities = 54/60 (90%), Positives = 57/60 (95%)
 Frame = +3

Query: 3   RRHAGMQAEVLNMIIADLFQGHPISQRKLKELLGHTPSQVLAGAVLGILVACICCQGSLV 182
           RRHAGMQAEVLNMI+ DLFQGHPISQRKLKELLGH PSQVLAGA+LGILVAC+CCQG LV
Sbjct: 114 RRHAGMQAEVLNMIVEDLFQGHPISQRKLKELLGHNPSQVLAGALLGILVACVCCQGCLV 173


>ref|XP_002263519.1| PREDICTED: uncharacterized membrane protein yuiD [Vitis vinifera]
           gi|297745470|emb|CBI40550.3| unnamed protein product
           [Vitis vinifera]
          Length = 252

 Score =  114 bits (285), Expect = 8e-24
 Identities = 53/60 (88%), Positives = 58/60 (96%)
 Frame = +3

Query: 3   RRHAGMQAEVLNMIIADLFQGHPISQRKLKELLGHTPSQVLAGAVLGILVACICCQGSLV 182
           RRHAGMQAEVLNMI+ DLF+GHPISQRKLKE+LGHTPSQVLAGAVLGI++ACICCQG LV
Sbjct: 191 RRHAGMQAEVLNMIVEDLFKGHPISQRKLKEILGHTPSQVLAGAVLGIVIACICCQGCLV 250


>emb|CAN71954.1| hypothetical protein VITISV_024312 [Vitis vinifera]
          Length = 185

 Score =  114 bits (285), Expect = 8e-24
 Identities = 53/60 (88%), Positives = 58/60 (96%)
 Frame = +3

Query: 3   RRHAGMQAEVLNMIIADLFQGHPISQRKLKELLGHTPSQVLAGAVLGILVACICCQGSLV 182
           RRHAGMQAEVLNMI+ DLF+GHPISQRKLKE+LGHTPSQVLAGAVLGI++ACICCQG LV
Sbjct: 124 RRHAGMQAEVLNMIVEDLFKGHPISQRKLKEILGHTPSQVLAGAVLGIVIACICCQGCLV 183


>ref|XP_002876638.1| hypothetical protein ARALYDRAFT_907735 [Arabidopsis lyrata subsp.
           lyrata] gi|297322476|gb|EFH52897.1| hypothetical protein
           ARALYDRAFT_907735 [Arabidopsis lyrata subsp. lyrata]
          Length = 285

 Score =  111 bits (277), Expect = 7e-23
 Identities = 51/62 (82%), Positives = 58/62 (93%)
 Frame = +3

Query: 3   RRHAGMQAEVLNMIIADLFQGHPISQRKLKELLGHTPSQVLAGAVLGILVACICCQGSLV 182
           RRHAGMQAEVLN+II DLF+GHPISQRKLKELLGHTPSQVLAGA++G+++AC CCQG LV
Sbjct: 224 RRHAGMQAEVLNLIIRDLFEGHPISQRKLKELLGHTPSQVLAGALVGVVIACFCCQGYLV 283

Query: 183 PA 188
            A
Sbjct: 284 SA 285


>emb|CAB71107.1| putative protein [Arabidopsis thaliana]
          Length = 197

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/60 (85%), Positives = 57/60 (95%)
 Frame = +3

Query: 3   RRHAGMQAEVLNMIIADLFQGHPISQRKLKELLGHTPSQVLAGAVLGILVACICCQGSLV 182
           RRHAGMQAEVLN+II DLF+GHPISQRKLKELLGHTPSQVLAGA++GI++AC CCQG LV
Sbjct: 136 RRHAGMQAEVLNLIIRDLFEGHPISQRKLKELLGHTPSQVLAGALVGIVIACFCCQGYLV 195


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