BLASTX nr result

ID: Coptis25_contig00023054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023054
         (1069 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297859.1| predicted protein [Populus trichocarpa] gi|2...   379   e-103
ref|XP_002273468.1| PREDICTED: glycerophosphodiester phosphodies...   379   e-103
emb|CBI21310.3| unnamed protein product [Vitis vinifera]              379   e-103
ref|XP_002328930.1| predicted protein [Populus trichocarpa] gi|2...   375   e-101
ref|XP_002512887.1| glycerophosphodiester phosphodiesterase, put...   374   e-101

>ref|XP_002297859.1| predicted protein [Populus trichocarpa] gi|222845117|gb|EEE82664.1|
            predicted protein [Populus trichocarpa]
          Length = 388

 Score =  379 bits (974), Expect = e-103
 Identities = 195/286 (68%), Positives = 225/286 (78%), Gaps = 1/286 (0%)
 Frame = -1

Query: 1069 FVEFDVQVTRDDCPVIFHDNFIYREENGIVVEKRVTELTLAEFLCYGG-GESSNAGESLL 893
            F+EFDVQVT+DDCPVIFHDNFI  E  G ++EKRVT+LTL EF  YG   E  + G+SL 
Sbjct: 93   FIEFDVQVTKDDCPVIFHDNFILTEHKGELIEKRVTDLTLDEFRSYGPQDEGGSEGKSLF 152

Query: 892  RKTKDGRIFNWKVESDDCSCTLKEAFKNVDSSLGFNIELKFDDYIVYQEKELINILGVIL 713
            +KTKDGRIF WKVE D   CTL+E F+ VD ++GFN+ELKFDD I+Y+E+EL +IL VIL
Sbjct: 153  KKTKDGRIFEWKVEEDAPFCTLQEVFQRVDDTMGFNVELKFDDNIIYKEEELKHILQVIL 212

Query: 712  QVVFEYAKGRPVIFSSFQPDATRLIRKLQNTYPVFFLTNGGSEIHIDVRRNSLDEAIQLC 533
            QVVFE+AK RPV+FSSFQPDA  L+RKLQ+TYPVFFLTNGGSEI+ DVRRNSLDEAI++C
Sbjct: 213  QVVFEHAKERPVMFSSFQPDAALLMRKLQSTYPVFFLTNGGSEIYTDVRRNSLDEAIKVC 272

Query: 532  MENGLQGIVSEVKAVFRQPGAITRIKESNLSLFTYGQLNNVPEAVHMQHLMGIDGVIVDL 353
             E GLQGIVSEVKAVFR PGA+TRIKES LSL TYGQLNNVPE VHMQHLMGI+GVIVDL
Sbjct: 273  TEGGLQGIVSEVKAVFRNPGAVTRIKESKLSLITYGQLNNVPEVVHMQHLMGIEGVIVDL 332

Query: 352  VREITEAVYDFVNKTXXXXXXXXXXXXEVQMLRTERPNFSQHELSF 215
            V EITEAV  FV+                  ++T +P FS  ELSF
Sbjct: 333  VHEITEAVSHFVDSAKHGEESGLFAEEGKIQVKT-KPRFSSEELSF 377


>ref|XP_002273468.1| PREDICTED: glycerophosphodiester phosphodiesterase GDE1 [Vitis
            vinifera] gi|147820259|emb|CAN71478.1| hypothetical
            protein VITISV_038621 [Vitis vinifera]
          Length = 382

 Score =  379 bits (973), Expect = e-103
 Identities = 189/286 (66%), Positives = 231/286 (80%), Gaps = 1/286 (0%)
 Frame = -1

Query: 1069 FVEFDVQVTRDDCPVIFHDNFIYREENGIVVEKRVTELTLAEFLCYGGG-ESSNAGESLL 893
            FVEFDVQVT+DD PVIFHDNFI+ E+NG+V EKRVTEL L++FL YG   E    G+S+L
Sbjct: 87   FVEFDVQVTKDDIPVIFHDNFIFSEDNGVVYEKRVTELLLSDFLRYGPQREPGKVGKSML 146

Query: 892  RKTKDGRIFNWKVESDDCSCTLKEAFKNVDSSLGFNIELKFDDYIVYQEKELINILGVIL 713
            RKTKDGRI NW VE+DDC CTLKEAF+ V+ SLGFNIELKFDD IVY+++ L ++L  ++
Sbjct: 147  RKTKDGRIVNWNVEADDCLCTLKEAFEKVEPSLGFNIELKFDDNIVYEQEYLTHVLQAMV 206

Query: 712  QVVFEYAKGRPVIFSSFQPDATRLIRKLQNTYPVFFLTNGGSEIHIDVRRNSLDEAIQLC 533
            +VVF+YAK RP+IFS+FQPDA +L+RKLQ++YPVFFLTNGG+E++ DVRRNSL+EA++LC
Sbjct: 207  EVVFQYAKDRPIIFSTFQPDAAQLVRKLQSSYPVFFLTNGGTEVYYDVRRNSLEEAVKLC 266

Query: 532  MENGLQGIVSEVKAVFRQPGAITRIKESNLSLFTYGQLNNVPEAVHMQHLMGIDGVIVDL 353
            +E GLQGIVS+VKAVFR P A+T+IKES LSL TYGQLNNV EAV+MQHLMG++GVIVDL
Sbjct: 267  LEGGLQGIVSQVKAVFRNPAAVTKIKESKLSLLTYGQLNNVAEAVYMQHLMGVEGVIVDL 326

Query: 352  VREITEAVYDFVNKTXXXXXXXXXXXXEVQMLRTERPNFSQHELSF 215
            V+EITEAV D + K               QM    +P FSQ ELSF
Sbjct: 327  VKEITEAVSDLM-KPSKEGDEESLPEGVGQMQVKSKPQFSQRELSF 371


>emb|CBI21310.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score =  379 bits (972), Expect = e-103
 Identities = 188/286 (65%), Positives = 231/286 (80%), Gaps = 1/286 (0%)
 Frame = -1

Query: 1069 FVEFDVQVTRDDCPVIFHDNFIYREENGIVVEKRVTELTLAEFLCYGGG-ESSNAGESLL 893
            FVEFDVQVT+DD PVIFHDNFI+ E+NG+V EKRVTEL L++FL YG   E    G+S+L
Sbjct: 87   FVEFDVQVTKDDIPVIFHDNFIFSEDNGVVYEKRVTELLLSDFLRYGPQREPGKVGKSML 146

Query: 892  RKTKDGRIFNWKVESDDCSCTLKEAFKNVDSSLGFNIELKFDDYIVYQEKELINILGVIL 713
            RKTKDGRI NW VE+DDC CTLKEAF+ V+ SLGFNIELKFDD IVY+++ L ++L  ++
Sbjct: 147  RKTKDGRIVNWNVEADDCLCTLKEAFEKVEPSLGFNIELKFDDNIVYEQEYLTHVLQAMV 206

Query: 712  QVVFEYAKGRPVIFSSFQPDATRLIRKLQNTYPVFFLTNGGSEIHIDVRRNSLDEAIQLC 533
            +VVF+YAK RP+IFS+FQPDA +L+RKLQ++YPVFFLTNGG+E++ DVRRNSL+EA++LC
Sbjct: 207  EVVFQYAKDRPIIFSTFQPDAAQLVRKLQSSYPVFFLTNGGTEVYYDVRRNSLEEAVKLC 266

Query: 532  MENGLQGIVSEVKAVFRQPGAITRIKESNLSLFTYGQLNNVPEAVHMQHLMGIDGVIVDL 353
            +E GLQGIVS+VKAVFR P A+T+IKES LSL TYGQLNNV EAV+MQHLMG++GVIVDL
Sbjct: 267  LEGGLQGIVSQVKAVFRNPAAVTKIKESKLSLLTYGQLNNVAEAVYMQHLMGVEGVIVDL 326

Query: 352  VREITEAVYDFVNKTXXXXXXXXXXXXEVQMLRTERPNFSQHELSF 215
            V+EITEAV D +  +              QM    +P FSQ ELSF
Sbjct: 327  VKEITEAVSDLMKPSKEG-----------QMQVKSKPQFSQRELSF 361


>ref|XP_002328930.1| predicted protein [Populus trichocarpa] gi|222839360|gb|EEE77697.1|
            predicted protein [Populus trichocarpa]
          Length = 382

 Score =  375 bits (963), Expect = e-101
 Identities = 187/285 (65%), Positives = 226/285 (79%)
 Frame = -1

Query: 1069 FVEFDVQVTRDDCPVIFHDNFIYREENGIVVEKRVTELTLAEFLCYGGGESSNAGESLLR 890
            F+EFDVQVT+DDCPVIFHDNFI  E+NG + EKRVTEL L+EFLC+G  +   AG+SLLR
Sbjct: 88   FIEFDVQVTKDDCPVIFHDNFILSEDNGTIFEKRVTELCLSEFLCFGPQKEGRAGKSLLR 147

Query: 889  KTKDGRIFNWKVESDDCSCTLKEAFKNVDSSLGFNIELKFDDYIVYQEKELINILGVILQ 710
            KTK+G+I  W VE DD  CTL++AF+ V+SSLGFNIELKFDD+IVYQ+  LI +L  ILQ
Sbjct: 148  KTKEGKILEWNVEKDDSLCTLQDAFQQVESSLGFNIELKFDDHIVYQQDYLIRVLQAILQ 207

Query: 709  VVFEYAKGRPVIFSSFQPDATRLIRKLQNTYPVFFLTNGGSEIHIDVRRNSLDEAIQLCM 530
            VVF++ K RPVIFSSFQPDA  L+RKLQ+T+PV+FLTNGG+EI  D RRNSL+EAI++C+
Sbjct: 208  VVFDHGKDRPVIFSSFQPDAALLVRKLQSTFPVYFLTNGGTEIFYDARRNSLEEAIKVCL 267

Query: 529  ENGLQGIVSEVKAVFRQPGAITRIKESNLSLFTYGQLNNVPEAVHMQHLMGIDGVIVDLV 350
            E GLQGIVSEVK VFR PGA+ +IK++ LSL TYG+LNNV EAV+MQHLMGIDGVIVDLV
Sbjct: 268  EGGLQGIVSEVKGVFRNPGAVNKIKDAKLSLLTYGKLNNVSEAVYMQHLMGIDGVIVDLV 327

Query: 349  REITEAVYDFVNKTXXXXXXXXXXXXEVQMLRTERPNFSQHELSF 215
            +EITEAV D + K             + +M    +P FSQ ELSF
Sbjct: 328  QEITEAVSDLI-KPSKMGEAESLAEGDGEMEVKSKPQFSQMELSF 371


>ref|XP_002512887.1| glycerophosphodiester phosphodiesterase, putative [Ricinus communis]
            gi|223547898|gb|EEF49390.1| glycerophosphodiester
            phosphodiesterase, putative [Ricinus communis]
          Length = 383

 Score =  374 bits (959), Expect = e-101
 Identities = 186/286 (65%), Positives = 220/286 (76%), Gaps = 1/286 (0%)
 Frame = -1

Query: 1069 FVEFDVQVTRDDCPVIFHDNFIYREENGIVVEKRVTELTLAEFLCYGGG-ESSNAGESLL 893
            F+EFDVQVT+D CP+IFHDNFI  E+NG + EKRVTEL L+EFLCYG   E+   G+SLL
Sbjct: 87   FIEFDVQVTKDGCPIIFHDNFILSEDNGTIFEKRVTELCLSEFLCYGPQKEAGQMGKSLL 146

Query: 892  RKTKDGRIFNWKVESDDCSCTLKEAFKNVDSSLGFNIELKFDDYIVYQEKELINILGVIL 713
            RKTKDG+I NW VE DDC CTLK+AF+ VD SLGFN+ELKFDD+IVYQ+  L  +L  IL
Sbjct: 147  RKTKDGKIVNWNVEKDDCVCTLKDAFQQVDPSLGFNVELKFDDHIVYQQDYLNYVLQAIL 206

Query: 712  QVVFEYAKGRPVIFSSFQPDATRLIRKLQNTYPVFFLTNGGSEIHIDVRRNSLDEAIQLC 533
            QVVFEY   RP+IFSSFQPDA  L+R+LQ TYPV+FLTNGG+EI  D RRNSL+EAI++C
Sbjct: 207  QVVFEYGLDRPIIFSSFQPDAALLVRQLQCTYPVYFLTNGGTEIFYDTRRNSLEEAIKVC 266

Query: 532  MENGLQGIVSEVKAVFRQPGAITRIKESNLSLFTYGQLNNVPEAVHMQHLMGIDGVIVDL 353
            +E GL GIVSEVK +FR PGA+ +IKE+ LSL TYG+LNNV EAV+MQHLMGIDGVIVDL
Sbjct: 267  LEGGLHGIVSEVKGIFRNPGAVAKIKEAKLSLLTYGKLNNVSEAVYMQHLMGIDGVIVDL 326

Query: 352  VREITEAVYDFVNKTXXXXXXXXXXXXEVQMLRTERPNFSQHELSF 215
            V+EITEAV D +               + +M     P FSQ ELSF
Sbjct: 327  VKEITEAVSDMIKPAKVDDEESNLAEKDSEMEMKSIPQFSQKELSF 372


Top