BLASTX nr result

ID: Coptis25_contig00023042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023042
         (1249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280827.1| PREDICTED: UPF0160 protein MYG1, mitochondri...   577   e-162
emb|CBI34574.3| unnamed protein product [Vitis vinifera]              576   e-162
ref|XP_002518897.1| Protein MYG1, putative [Ricinus communis] gi...   564   e-158
ref|XP_004143846.1| PREDICTED: UPF0160 protein-like [Cucumis sat...   550   e-154
emb|CAN62285.1| hypothetical protein VITISV_034702 [Vitis vinifera]   550   e-154

>ref|XP_002280827.1| PREDICTED: UPF0160 protein MYG1, mitochondrial-like [Vitis vinifera]
          Length = 361

 Score =  577 bits (1486), Expect = e-162
 Identities = 278/342 (81%), Positives = 311/342 (90%)
 Frame = +2

Query: 164  LMATTNLPAAGFFTSTETKKRVGTHNGSFHCDEALGCFMIRLTHKFLGADIVRTRDPKVL 343
            LMA + + A   F++    KRVGTHNGSFHCDEALGCFMIRLT KF  A IVRTRD KVL
Sbjct: 23   LMAHSRVSA---FSTAPGLKRVGTHNGSFHCDEALGCFMIRLTDKFRDAQIVRTRDQKVL 79

Query: 344  ETLDAVLDVGGVYDPTTDRYDHHQKGFDQVFGHGFTTKLSSAGLVYKHYGMEIIAKELQL 523
            + LDAVLDVGGVYDP+ DRYDHHQKGF +VFGHGF+TKLSSAGLVYKH+GMEIIAKELQL
Sbjct: 80   DGLDAVLDVGGVYDPSRDRYDHHQKGFGEVFGHGFSTKLSSAGLVYKHFGMEIIAKELQL 139

Query: 524  DQGHPNVLRLFLAVYKSFMEAIDAIDNGVNQYDTDLPPRYVNNTNLSSRVGKLNLDWMEP 703
            DQGHP+VLRLFLAVYKSFMEA+DA+DNG+NQYDTD P RYVNNT+LSSRVGKLNLDWM+P
Sbjct: 140  DQGHPDVLRLFLAVYKSFMEAVDAVDNGINQYDTDQPLRYVNNTHLSSRVGKLNLDWMDP 199

Query: 704  DQSSDKENEAFQRAMALAGGEFLESVRFYARSWLPARSIVMECLAARGDVDASGEIMTLN 883
            DQSS+KENEAF+RAM L+G EFL++VRF+A+SWLPARSIVMECLAAR D+D SGEIM LN
Sbjct: 200  DQSSEKENEAFERAMNLSGSEFLDNVRFHAKSWLPARSIVMECLAARMDIDPSGEIMVLN 259

Query: 884  KFCPWKLHLFELEEEMKIDPSIKYVLYEDDRSKNWRVQAVAVSPDKFESRKPLPAQWRGL 1063
            +FCPWKLHLFELEEEMKIDP IKYVLY+DDRSK+WRVQAVAV+PDKFESRKPLP+QWRGL
Sbjct: 260  RFCPWKLHLFELEEEMKIDPPIKYVLYQDDRSKHWRVQAVAVAPDKFESRKPLPSQWRGL 319

Query: 1064 RDEELSKESGIAGCVFVHMSGFIGGNATYEGALAMARAGLQL 1189
            RD+ELS+E+GI GCVFVHMSGFIGGN  YEGALAMA+  L+L
Sbjct: 320  RDDELSREAGIPGCVFVHMSGFIGGNQNYEGALAMAKDALKL 361


>emb|CBI34574.3| unnamed protein product [Vitis vinifera]
          Length = 338

 Score =  576 bits (1484), Expect = e-162
 Identities = 274/330 (83%), Positives = 305/330 (92%)
 Frame = +2

Query: 200  FTSTETKKRVGTHNGSFHCDEALGCFMIRLTHKFLGADIVRTRDPKVLETLDAVLDVGGV 379
            F++    KRVGTHNGSFHCDEALGCFMIRLT KF  A IVRTRD KVL+ LDAVLDVGGV
Sbjct: 9    FSTAPGLKRVGTHNGSFHCDEALGCFMIRLTDKFRDAQIVRTRDQKVLDGLDAVLDVGGV 68

Query: 380  YDPTTDRYDHHQKGFDQVFGHGFTTKLSSAGLVYKHYGMEIIAKELQLDQGHPNVLRLFL 559
            YDP+ DRYDHHQKGF +VFGHGF+TKLSSAGLVYKH+GMEIIAKELQLDQGHP+VLRLFL
Sbjct: 69   YDPSRDRYDHHQKGFGEVFGHGFSTKLSSAGLVYKHFGMEIIAKELQLDQGHPDVLRLFL 128

Query: 560  AVYKSFMEAIDAIDNGVNQYDTDLPPRYVNNTNLSSRVGKLNLDWMEPDQSSDKENEAFQ 739
            AVYKSFMEA+DA+DNG+NQYDTD P RYVNNT+LSSRVGKLNLDWM+PDQSS+KENEAF+
Sbjct: 129  AVYKSFMEAVDAVDNGINQYDTDQPLRYVNNTHLSSRVGKLNLDWMDPDQSSEKENEAFE 188

Query: 740  RAMALAGGEFLESVRFYARSWLPARSIVMECLAARGDVDASGEIMTLNKFCPWKLHLFEL 919
            RAM L+G EFL++VRF+A+SWLPARSIVMECLAAR D+D SGEIM LN+FCPWKLHLFEL
Sbjct: 189  RAMNLSGSEFLDNVRFHAKSWLPARSIVMECLAARMDIDPSGEIMVLNRFCPWKLHLFEL 248

Query: 920  EEEMKIDPSIKYVLYEDDRSKNWRVQAVAVSPDKFESRKPLPAQWRGLRDEELSKESGIA 1099
            EEEMKIDP IKYVLY+DDRSK+WRVQAVAV+PDKFESRKPLP+QWRGLRD+ELS+E+GI 
Sbjct: 249  EEEMKIDPPIKYVLYQDDRSKHWRVQAVAVAPDKFESRKPLPSQWRGLRDDELSREAGIP 308

Query: 1100 GCVFVHMSGFIGGNATYEGALAMARAGLQL 1189
            GCVFVHMSGFIGGN  YEGALAMA+  L+L
Sbjct: 309  GCVFVHMSGFIGGNQNYEGALAMAKDALKL 338


>ref|XP_002518897.1| Protein MYG1, putative [Ricinus communis] gi|223541884|gb|EEF43430.1|
            Protein MYG1, putative [Ricinus communis]
          Length = 373

 Score =  564 bits (1453), Expect = e-158
 Identities = 266/323 (82%), Positives = 299/323 (92%)
 Frame = +2

Query: 221  KRVGTHNGSFHCDEALGCFMIRLTHKFLGADIVRTRDPKVLETLDAVLDVGGVYDPTTDR 400
            KRVGTHNGSFHCDEALGCFMIRLT+KF  A+IVR+RD +VLE+LDAVLDVGGVYDP  DR
Sbjct: 51   KRVGTHNGSFHCDEALGCFMIRLTNKFSNAEIVRSRDLQVLESLDAVLDVGGVYDPVHDR 110

Query: 401  YDHHQKGFDQVFGHGFTTKLSSAGLVYKHYGMEIIAKELQLDQGHPNVLRLFLAVYKSFM 580
            YDHHQKGF++VFGHGFTTKLSSAGLVYKH+G EIIAKELQLD+GHPNV RLFLA+YKSFM
Sbjct: 111  YDHHQKGFEEVFGHGFTTKLSSAGLVYKHFGKEIIAKELQLDEGHPNVHRLFLAIYKSFM 170

Query: 581  EAIDAIDNGVNQYDTDLPPRYVNNTNLSSRVGKLNLDWMEPDQSSDKENEAFQRAMALAG 760
            EAIDA+DNG+NQYDTD PPRYVNNT+LSSRVG+LNLDW+EPDQS +KENE FQRAM LAG
Sbjct: 171  EAIDAVDNGINQYDTDKPPRYVNNTHLSSRVGRLNLDWIEPDQSPEKENEVFQRAMTLAG 230

Query: 761  GEFLESVRFYARSWLPARSIVMECLAARGDVDASGEIMTLNKFCPWKLHLFELEEEMKID 940
             EFL+S+ ++A+SWLPARSIVMECL AR DVD SGEIM L  FCPWKLHLFE+EEE+KI+
Sbjct: 231  SEFLDSLHYHAKSWLPARSIVMECLEARSDVDPSGEIMVLATFCPWKLHLFEIEEELKIE 290

Query: 941  PSIKYVLYEDDRSKNWRVQAVAVSPDKFESRKPLPAQWRGLRDEELSKESGIAGCVFVHM 1120
            PSIKYVLY+DDRSK+WRVQAVAV+PD+FESR+ LPAQWRGLRD+ELS+ESGI  CVFVHM
Sbjct: 291  PSIKYVLYQDDRSKHWRVQAVAVAPDRFESRRALPAQWRGLRDDELSRESGIPACVFVHM 350

Query: 1121 SGFIGGNATYEGALAMARAGLQL 1189
            SGFIGGN +YEGALAMARA L+L
Sbjct: 351  SGFIGGNKSYEGALAMARAALKL 373


>ref|XP_004143846.1| PREDICTED: UPF0160 protein-like [Cucumis sativus]
            gi|449509379|ref|XP_004163571.1| PREDICTED: UPF0160
            protein-like [Cucumis sativus]
          Length = 345

 Score =  550 bits (1416), Expect = e-154
 Identities = 260/323 (80%), Positives = 296/323 (91%)
 Frame = +2

Query: 221  KRVGTHNGSFHCDEALGCFMIRLTHKFLGADIVRTRDPKVLETLDAVLDVGGVYDPTTDR 400
            KRVGTH+GSFHCDEALGCFMIRLT KF  A IVRTRDP+VL+ LDAVLDVGGVYDP+ DR
Sbjct: 23   KRVGTHHGSFHCDEALGCFMIRLTDKFSNAQIVRTRDPQVLQGLDAVLDVGGVYDPSHDR 82

Query: 401  YDHHQKGFDQVFGHGFTTKLSSAGLVYKHYGMEIIAKELQLDQGHPNVLRLFLAVYKSFM 580
            YDHHQKGF++VFGHGF+TKLSSAGLVYKH+G EIIAKELQ+D+GHP+V RLFLAVYKSFM
Sbjct: 83   YDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKEIIAKELQVDEGHPDVHRLFLAVYKSFM 142

Query: 581  EAIDAIDNGVNQYDTDLPPRYVNNTNLSSRVGKLNLDWMEPDQSSDKENEAFQRAMALAG 760
            EAIDA+DNG+NQYDTD PP+YVNNT+LSSRVG+LNLDW++PDQS + EN+AF++AMALAG
Sbjct: 143  EAIDAVDNGINQYDTDKPPKYVNNTHLSSRVGRLNLDWIDPDQSPENENKAFEKAMALAG 202

Query: 761  GEFLESVRFYARSWLPARSIVMECLAARGDVDASGEIMTLNKFCPWKLHLFELEEEMKID 940
             EFL+SVRF+A+SWLPARSIVM  LAAR  +D SGEIM +  FCPWKLHLFELE E+KI+
Sbjct: 203  NEFLDSVRFHAKSWLPARSIVMGSLAARHTIDPSGEIMVMTTFCPWKLHLFELEAELKIE 262

Query: 941  PSIKYVLYEDDRSKNWRVQAVAVSPDKFESRKPLPAQWRGLRDEELSKESGIAGCVFVHM 1120
             SIKYVLY+DDRSK+WRVQAVAVSPD+FESR+PLPAQWRGLRDEELSKESGI GCVFVHM
Sbjct: 263  NSIKYVLYQDDRSKHWRVQAVAVSPDRFESRRPLPAQWRGLRDEELSKESGIPGCVFVHM 322

Query: 1121 SGFIGGNATYEGALAMARAGLQL 1189
            SGFIGGN TY+GAL MA+  L+L
Sbjct: 323  SGFIGGNQTYDGALTMAKNALKL 345


>emb|CAN62285.1| hypothetical protein VITISV_034702 [Vitis vinifera]
          Length = 325

 Score =  550 bits (1416), Expect = e-154
 Identities = 266/323 (82%), Positives = 291/323 (90%)
 Frame = +2

Query: 221  KRVGTHNGSFHCDEALGCFMIRLTHKFLGADIVRTRDPKVLETLDAVLDVGGVYDPTTDR 400
            KRVGTHNGSFHCDEALGCFMIRLT KF  A IVRTRD KVL+ LDAVLDVGGVYDP+ DR
Sbjct: 6    KRVGTHNGSFHCDEALGCFMIRLTDKFRDAQIVRTRDQKVLDGLDAVLDVGGVYDPSRDR 65

Query: 401  YDHHQKGFDQVFGHGFTTKLSSAGLVYKHYGMEIIAKELQLDQGHPNVLRLFLAVYKSFM 580
            YDHHQKGF +VFGHGF+TKLSSAGLVYKH+GMEIIAKELQLDQGHP+VLRLFLAVYKSFM
Sbjct: 66   YDHHQKGFGEVFGHGFSTKLSSAGLVYKHFGMEIIAKELQLDQGHPDVLRLFLAVYKSFM 125

Query: 581  EAIDAIDNGVNQYDTDLPPRYVNNTNLSSRVGKLNLDWMEPDQSSDKENEAFQRAMALAG 760
            EA+DA+DNG+NQYDTD P RYVNNT+LSSRVGKLNLDWM+PDQSS+KENEAF+RAM L+G
Sbjct: 126  EAVDAVDNGINQYDTDQPXRYVNNTHLSSRVGKLNLDWMDPDQSSEKENEAFERAMNLSG 185

Query: 761  GEFLESVRFYARSWLPARSIVMECLAARGDVDASGEIMTLNKFCPWKLHLFELEEEMKID 940
             E      F     LPARSIVMECLAAR D+D SGEIM LN+FCPWKLHLFELEEEMKID
Sbjct: 186  SEMFV---FMQSHGLPARSIVMECLAARMDIDPSGEIMVLNRFCPWKLHLFELEEEMKID 242

Query: 941  PSIKYVLYEDDRSKNWRVQAVAVSPDKFESRKPLPAQWRGLRDEELSKESGIAGCVFVHM 1120
            P IKYVLY+DDRSK+WRVQAVAV+PDKFESRKPLP+QWRGLRD+ELS+E+GI GCVFVHM
Sbjct: 243  PPIKYVLYQDDRSKHWRVQAVAVAPDKFESRKPLPSQWRGLRDDELSREAGIPGCVFVHM 302

Query: 1121 SGFIGGNATYEGALAMARAGLQL 1189
            SGFIGGN  YEGALAMA+  L+L
Sbjct: 303  SGFIGGNQNYEGALAMAKDALKL 325


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