BLASTX nr result

ID: Coptis25_contig00023040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023040
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166148.1| PREDICTED: uncharacterized protein LOC101229...   246   2e-63
ref|XP_004149818.1| PREDICTED: uncharacterized protein LOC101221...   246   2e-63
emb|CAN77499.1| hypothetical protein VITISV_002404 [Vitis vinifera]   239   2e-61
ref|XP_003635227.1| PREDICTED: uncharacterized protein LOC100852...   238   3e-61
ref|XP_002315250.1| predicted protein [Populus trichocarpa] gi|2...   233   1e-59

>ref|XP_004166148.1| PREDICTED: uncharacterized protein LOC101229995 [Cucumis sativus]
          Length = 329

 Score =  246 bits (627), Expect = 2e-63
 Identities = 122/167 (73%), Positives = 138/167 (82%), Gaps = 2/167 (1%)
 Frame = +1

Query: 1   GIINNNNLPFLTGLGGSTNTLVQXXXXXXXXXXXXL--PSVNGAQLPGGTTVQKLMFGTM 174
           G+INNNNLPFL GLGG+ + L+Q            L  PSVN  QLP G +VQ+L+FGTM
Sbjct: 159 GLINNNNLPFLIGLGGAASPLLQNSNGGGNNFNGQLGFPSVNAGQLPSGVSVQQLLFGTM 218

Query: 175 TVIDDELTEGHELGSGLVGKAQGFYVVSSEDGSSQTMAFTAMFESGSYVDSISFFGVHLT 354
           TVIDDELTEGHELGSGL+GKAQGFYVVSSEDG+SQTMAFT MFESG YVDS+SFFGVH T
Sbjct: 219 TVIDDELTEGHELGSGLIGKAQGFYVVSSEDGNSQTMAFTTMFESGHYVDSLSFFGVHRT 278

Query: 355 AVSESQIGIMGGTGKYVNAKGFATVKTIPSTNQHDTDGVETLLEFTV 495
           AVSES + IMGGTGKYVNA+G+A VKT+P  NQH+TDGVETLL+FTV
Sbjct: 279 AVSESHLAIMGGTGKYVNARGYANVKTLPGINQHETDGVETLLQFTV 325


>ref|XP_004149818.1| PREDICTED: uncharacterized protein LOC101221251 [Cucumis sativus]
          Length = 329

 Score =  246 bits (627), Expect = 2e-63
 Identities = 122/167 (73%), Positives = 138/167 (82%), Gaps = 2/167 (1%)
 Frame = +1

Query: 1   GIINNNNLPFLTGLGGSTNTLVQXXXXXXXXXXXXL--PSVNGAQLPGGTTVQKLMFGTM 174
           G+INNNNLPFL GLGG+ + L+Q            L  PSVN  QLP G +VQ+L+FGTM
Sbjct: 159 GLINNNNLPFLIGLGGAASPLLQNSNGGGNNFNGQLGFPSVNAGQLPSGVSVQQLLFGTM 218

Query: 175 TVIDDELTEGHELGSGLVGKAQGFYVVSSEDGSSQTMAFTAMFESGSYVDSISFFGVHLT 354
           TVIDDELTEGHELGSGL+GKAQGFYVVSSEDG+SQTMAFT MFESG YVDS+SFFGVH T
Sbjct: 219 TVIDDELTEGHELGSGLIGKAQGFYVVSSEDGNSQTMAFTTMFESGHYVDSLSFFGVHRT 278

Query: 355 AVSESQIGIMGGTGKYVNAKGFATVKTIPSTNQHDTDGVETLLEFTV 495
           AVSES + IMGGTGKYVNA+G+A VKT+P  NQH+TDGVETLL+FTV
Sbjct: 279 AVSESHLAIMGGTGKYVNARGYANVKTLPGINQHETDGVETLLQFTV 325


>emb|CAN77499.1| hypothetical protein VITISV_002404 [Vitis vinifera]
          Length = 1393

 Score =  239 bits (610), Expect = 2e-61
 Identities = 123/166 (74%), Positives = 135/166 (81%), Gaps = 1/166 (0%)
 Frame = +1

Query: 1    GIINNNNLPFLTGLGGSTNTLVQXXXXXXXXXXXXLPSVNGAQLPGGTTVQKLMFGTMTV 180
            G+INNNN+PFLTGL G T T++             LP  NG Q   G+++QKLMFGTMTV
Sbjct: 1224 GLINNNNIPFLTGLSGITPTVIPNNGNNLFNGGNGLPVGNGGQYLAGSSLQKLMFGTMTV 1283

Query: 181  IDDELTEGHELGSGLVGKAQGFYVVSSEDGSSQTMAFTAMFESGSYVDSISFFGVHLTAV 360
            IDDELTEGHELGSG VGKAQGFYV SSEDG+SQTMAFTAMF+SGSY DS+SFFGVH TAV
Sbjct: 1284 IDDELTEGHELGSGSVGKAQGFYVASSEDGTSQTMAFTAMFQSGSYADSLSFFGVHRTAV 1343

Query: 361  SESQIGIMGGTGKYVNAKGFATVKTIPSTNQH-DTDGVETLLEFTV 495
            SESQ+ IMGGTGKYVNAKGFATVKTIP T+Q   TDGVETLLEFTV
Sbjct: 1344 SESQLAIMGGTGKYVNAKGFATVKTIPPTHQQATTDGVETLLEFTV 1389


>ref|XP_003635227.1| PREDICTED: uncharacterized protein LOC100852526 [Vitis vinifera]
          Length = 358

 Score =  238 bits (608), Expect = 3e-61
 Identities = 122/166 (73%), Positives = 135/166 (81%), Gaps = 1/166 (0%)
 Frame = +1

Query: 1   GIINNNNLPFLTGLGGSTNTLVQXXXXXXXXXXXXLPSVNGAQLPGGTTVQKLMFGTMTV 180
           G+INNNN+PFLTGL G T T++             LP  NG Q   G+++QKLMFGTMTV
Sbjct: 189 GLINNNNIPFLTGLSGITPTVIPNNGNNLFNGGNGLPVGNGGQYLAGSSLQKLMFGTMTV 248

Query: 181 IDDELTEGHELGSGLVGKAQGFYVVSSEDGSSQTMAFTAMFESGSYVDSISFFGVHLTAV 360
           IDDE+TEGHELGSG VGKAQGFYV SSEDG+SQTMAFTAMF+SGSY DS+SFFGVH TAV
Sbjct: 249 IDDEITEGHELGSGSVGKAQGFYVASSEDGTSQTMAFTAMFQSGSYADSLSFFGVHRTAV 308

Query: 361 SESQIGIMGGTGKYVNAKGFATVKTIPSTNQH-DTDGVETLLEFTV 495
           SESQ+ IMGGTGKYVNAKGFATVKTIP T+Q   TDGVETLLEFTV
Sbjct: 309 SESQLAIMGGTGKYVNAKGFATVKTIPPTHQQATTDGVETLLEFTV 354


>ref|XP_002315250.1| predicted protein [Populus trichocarpa] gi|222864290|gb|EEF01421.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score =  233 bits (594), Expect = 1e-59
 Identities = 116/165 (70%), Positives = 131/165 (79%)
 Frame = +1

Query: 1   GIINNNNLPFLTGLGGSTNTLVQXXXXXXXXXXXXLPSVNGAQLPGGTTVQKLMFGTMTV 180
           G+INNNNLPFLTGLGG+T  ++Q            LP   G  LP G+  Q+LMFGT+TV
Sbjct: 52  GLINNNNLPFLTGLGGTTQPVLQNNGNNFNNAFN-LPQSTGGNLPSGSAFQQLMFGTITV 110

Query: 181 IDDELTEGHELGSGLVGKAQGFYVVSSEDGSSQTMAFTAMFESGSYVDSISFFGVHLTAV 360
           IDDE+TEGH+LGSG +GKAQGFYV SS DG+SQTMAFTAMF+SG Y DS+SFFGVH T V
Sbjct: 111 IDDEITEGHDLGSGFIGKAQGFYVASSVDGTSQTMAFTAMFQSGLYADSLSFFGVHRTGV 170

Query: 361 SESQIGIMGGTGKYVNAKGFATVKTIPSTNQHDTDGVETLLEFTV 495
           SESQ+ IMGGTGKYVNA+GFA VKTIPS NQH TDGVETLLEF V
Sbjct: 171 SESQLAIMGGTGKYVNAQGFAIVKTIPSNNQHATDGVETLLEFAV 215


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