BLASTX nr result

ID: Coptis25_contig00023031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023031
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166157.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...   126   2e-27
ref|XP_004143190.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...   126   2e-27
ref|XP_002277197.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...   124   6e-27
ref|XP_003536951.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...   117   1e-24
ref|NP_001235622.1| uncharacterized protein LOC100306478 [Glycin...   117   1e-24

>ref|XP_004166157.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase,
           mitochondrial-like [Cucumis sativus]
          Length = 132

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/105 (59%), Positives = 76/105 (72%)
 Frame = +3

Query: 60  SRSRFKLKPTLLFSSFFSTQPLDXXXXXXXXXXXXTGLGMVTPLGCGVETTWKRLIEGSC 239
           SR RF    +   SSF +T+ LD            TGLGMVTPLGCGV++TWKRLI+G C
Sbjct: 13  SRYRFVRHVSSSSSSFSATEALDPPPVVQARRVVVTGLGMVTPLGCGVKSTWKRLIDGEC 72

Query: 240 GIREITIDDLKMNGFDRDTQIYTFDQLTSKVAAVVPCGTNAGEFN 374
           GIR+++ +DL+MN FD +TQ+ T+DQLTSKVAAVVPCGT  GEFN
Sbjct: 73  GIRKLSQEDLQMNAFDSETQLLTYDQLTSKVAAVVPCGTEPGEFN 117


>ref|XP_004143190.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase,
           mitochondrial-like [Cucumis sativus]
          Length = 477

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/105 (59%), Positives = 76/105 (72%)
 Frame = +3

Query: 60  SRSRFKLKPTLLFSSFFSTQPLDXXXXXXXXXXXXTGLGMVTPLGCGVETTWKRLIEGSC 239
           SR RF    +   SSF +T+ LD            TGLGMVTPLGCGV++TWKRLI+G C
Sbjct: 13  SRYRFVRHVSSSSSSFSATEALDPPPVVQARRVVVTGLGMVTPLGCGVKSTWKRLIDGEC 72

Query: 240 GIREITIDDLKMNGFDRDTQIYTFDQLTSKVAAVVPCGTNAGEFN 374
           GIR+++ +DL+MN FD +TQ+ T+DQLTSKVAAVVPCGT  GEFN
Sbjct: 73  GIRKLSQEDLQMNAFDSETQLLTYDQLTSKVAAVVPCGTEPGEFN 117


>ref|XP_002277197.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial
           [Vitis vinifera] gi|297739239|emb|CBI28890.3| unnamed
           protein product [Vitis vinifera]
          Length = 463

 Score =  124 bits (312), Expect = 6e-27
 Identities = 55/70 (78%), Positives = 65/70 (92%)
 Frame = +3

Query: 165 TGLGMVTPLGCGVETTWKRLIEGSCGIREITIDDLKMNGFDRDTQIYTFDQLTSKVAAVV 344
           TGLGMVTPLGCGVETTWKRLIEG C IR I+ +DLKMNGFD++TQ++T+DQLTSKVAA+V
Sbjct: 34  TGLGMVTPLGCGVETTWKRLIEGKCAIRAISPEDLKMNGFDKETQLHTYDQLTSKVAAIV 93

Query: 345 PCGTNAGEFN 374
           PCGTN G+F+
Sbjct: 94  PCGTNPGDFS 103


>ref|XP_003536951.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase,
           mitochondrial-like [Glycine max]
          Length = 467

 Score =  117 bits (293), Expect = 1e-24
 Identities = 55/97 (56%), Positives = 72/97 (74%), Gaps = 3/97 (3%)
 Frame = +3

Query: 93  LFSSFF---STQPLDXXXXXXXXXXXXTGLGMVTPLGCGVETTWKRLIEGSCGIREITID 263
           LF+SF+   S+                TGLGMVTPLGCGV+TTWKRL++G CG+R ++++
Sbjct: 9   LFNSFYRTISSSTFPPPPVVSSRRVVVTGLGMVTPLGCGVDTTWKRLVDGECGVRALSLE 68

Query: 264 DLKMNGFDRDTQIYTFDQLTSKVAAVVPCGTNAGEFN 374
           DLKMN FD++TQ+ TFDQLTSKVAA+VP GT+ GEF+
Sbjct: 69  DLKMNSFDKETQLSTFDQLTSKVAALVPTGTHLGEFD 105


>ref|NP_001235622.1| uncharacterized protein LOC100306478 [Glycine max]
           gi|255628671|gb|ACU14680.1| unknown [Glycine max]
          Length = 124

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/97 (58%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
 Frame = +3

Query: 93  LFSSFF---STQPLDXXXXXXXXXXXXTGLGMVTPLGCGVETTWKRLIEGSCGIREITID 263
           LF+SF+   S+                TGLGMVTPLGCGV+TTWKRL+ G CG+  ++++
Sbjct: 9   LFNSFYRTISSSSFPPPPVVSSRIVVVTGLGMVTPLGCGVDTTWKRLVGGECGVGALSLE 68

Query: 264 DLKMNGFDRDTQIYTFDQLTSKVAAVVPCGTNAGEFN 374
           DLKMN FDR+TQ+ TFDQLTSKVAAVVP GTN GEF+
Sbjct: 69  DLKMNAFDRETQLSTFDQLTSKVAAVVPTGTNPGEFD 105


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