BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023027
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS76653.1| coat protein [Lettuce big-vein associated virus]        68   2e-09
gb|AAS76652.1| coat protein [Lettuce big-vein associated virus]        68   2e-09
gb|AFA36171.1| coat protein [Lettuce big-vein associated virus]        68   2e-09
gb|AAU12861.1| coat protein [Lettuce big-vein associated virus]        67   2e-09
gb|ADA60173.1| coat protein [Lettuce big-vein associated virus]        67   2e-09

>gb|AAS76653.1| coat protein [Lettuce big-vein associated virus]
          Length = 336

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
 Frame = +1

Query: 145 RLMPDSDSLAMLADVEIGILDKTVYESSGTSIEPT-EYGDSYQIAQGYSYLAASMLKMFA 321
           R+ P  D     ADV++  L+    +     +E   +     +I +  +++AAS LKMFA
Sbjct: 50  RIFPAKDKGKDTADVDVKNLEVAGVDYIDAMVETNVKDASDIEIIRAGAFIAASTLKMFA 109

Query: 322 KSAENYEKSW--SHIVHGYRKFYSVNCPISGVRLKTDVIKSIHDHFSSSELMRATLYRFL 495
           KS   + ++W   HI   Y  F     P       T   +++++ +   +L + TL R L
Sbjct: 110 KSFTGWTQAWEHKHIQKRYADFCKTEYPFKEFTTNTKCAETMYEAYQGQKLYQGTLGRIL 169

Query: 496 YNANWDGDDGSLQRYLYDIHLSHTGMHVVAIAYKICIVMNCTPATLLTVM-YANRF 660
           Y A  D  D      L+D HL++TGMH++       + +  T A LL+ + Y   F
Sbjct: 170 Y-ALGDVTDPRQTEMLFDQHLANTGMHIIPQFTNAQLSIGATAAGLLSALNYGQNF 224


>gb|AAS76652.1| coat protein [Lettuce big-vein associated virus]
          Length = 336

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
 Frame = +1

Query: 145 RLMPDSDSLAMLADVEIGILDKTVYESSGTSIEPT-EYGDSYQIAQGYSYLAASMLKMFA 321
           R+ P  D     ADV++  L+    +     +E   +     +I +  +++AAS LKMFA
Sbjct: 50  RIFPAKDKGKDTADVDVKNLEVAGVDYIDAMVETNVKDASDIEIIRAGAFIAASTLKMFA 109

Query: 322 KSAENYEKSW--SHIVHGYRKFYSVNCPISGVRLKTDVIKSIHDHFSSSELMRATLYRFL 495
           KS   + ++W   HI   Y  F     P       T   +++++ +   +L + TL R L
Sbjct: 110 KSFTGWTQAWEHKHIQKRYADFCKTEYPFKEFTTNTKCAETMYEAYQGQKLYQGTLGRIL 169

Query: 496 YNANWDGDDGSLQRYLYDIHLSHTGMHVVAIAYKICIVMNCTPATLLTVM-YANRF 660
           Y A  D  D      L+D HL++TGMH++       + +  T A LL+ + Y   F
Sbjct: 170 Y-ALGDVTDPRQTEMLFDQHLANTGMHIIPQFTNAQLSIGATTAGLLSALNYGQNF 224


>gb|AFA36171.1| coat protein [Lettuce big-vein associated virus]
          Length = 397

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
 Frame = +1

Query: 145 RLMPDSDSLAMLADVEIGILDKTVYESSGTSIEPT-EYGDSYQIAQGYSYLAASMLKMFA 321
           R+ P  D     ADV++  L+    +     +E   +     +I +  +++AAS LKMFA
Sbjct: 88  RIFPAKDKGKDTADVDVKNLEVAGVDYIDAMVETNVKDASDIEIIRAGAFIAASTLKMFA 147

Query: 322 KSAENYEKSW--SHIVHGYRKFYSVNCPISGVRLKTDVIKSIHDHFSSSELMRATLYRFL 495
           KS   + ++W   HI   Y  F     P       T   +++++ +   +L + TL R L
Sbjct: 148 KSFTGWTQAWEHKHIQKRYADFCKTEYPFKEFTTNTKCAETMYEAYQGQKLYQGTLGRIL 207

Query: 496 YNANWDGDDGSLQRYLYDIHLSHTGMHVVAIAYKICIVMNCTPATLLTVM-YANRF 660
           Y A  D  D      L+D HL++TGMH++       + +  T A LL+ + Y   F
Sbjct: 208 Y-ALGDVTDPRQTEMLFDQHLANTGMHIIPQFTNAQLSIGATTAGLLSALNYGQNF 262


>gb|AAU12861.1| coat protein [Lettuce big-vein associated virus]
          Length = 397

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
 Frame = +1

Query: 145 RLMPDSDSLAMLADVEIGILDKTVYESSGTSIEPTEYGDS-YQIAQGYSYLAASMLKMFA 321
           R+ P  D     ADV++  L+    +     +E      S  +I +  +++AAS LKMFA
Sbjct: 88  RIFPAKDKGKDTADVDVKNLEVAGVDYIDAMVETNVKDVSDIEIIRAGAFIAASTLKMFA 147

Query: 322 KSAENYEKSW--SHIVHGYRKFYSVNCPISGVRLKTDVIKSIHDHFSSSELMRATLYRFL 495
           KS   + ++W   HI   Y  F     P       T   +++++ +   +L + TL R L
Sbjct: 148 KSFTGWTQAWEHKHIQKRYADFCKTEYPFKEFTTNTKCAETMYEAYQGQKLYQGTLGRIL 207

Query: 496 YNANWDGDDGSLQRYLYDIHLSHTGMHVVAIAYKICIVMNCTPATLLTVM-YANRF 660
           Y A  D  D      L+D HL++TGMH++       + +  T A LL+ + Y   F
Sbjct: 208 Y-ALGDVTDPGQTEMLFDQHLANTGMHIIPQFTNAQLSIGATTAGLLSALNYGQNF 262


>gb|ADA60173.1| coat protein [Lettuce big-vein associated virus]
          Length = 397

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
 Frame = +1

Query: 145 RLMPDSDSLAMLADVEIGILDKTVYESSGTSIEPT-EYGDSYQIAQGYSYLAASMLKMFA 321
           R+ P  D     ADV++  L+    +     +E   +     +I +  +++AAS LKMFA
Sbjct: 88  RIFPAKDKGKDAADVDVKNLEVVGVDYIDAMVETNVKDASDIEIIRAGAFIAASTLKMFA 147

Query: 322 KSAENYEKSW--SHIVHGYRKFYSVNCPISGVRLKTDVIKSIHDHFSSSELMRATLYRFL 495
           KS   + ++W   HI   Y  F     P       T   +++++ +   +L + TL R L
Sbjct: 148 KSFTGWTQAWEHKHIQKRYADFCKTEYPFKEFTTNTKCAETMYEAYQGQKLYQGTLGRIL 207

Query: 496 YNANWDGDDGSLQRYLYDIHLSHTGMHVVAIAYKICIVMNCTPATLLTVM-YANRF 660
           Y A  D  D      L+D HL++TGMH++       + +  T A LL+ + Y   F
Sbjct: 208 Y-ALGDVADPRQTEMLFDQHLANTGMHIIPQFTNAQLSIGATTAGLLSALNYGQNF 262