BLASTX nr result
ID: Coptis25_contig00023020
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00023020 (329 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282065.2| PREDICTED: uncharacterized protein LOC100247... 60 2e-07 ref|XP_002318948.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 emb|CBI39598.3| unnamed protein product [Vitis vinifera] 55 6e-06 >ref|XP_002282065.2| PREDICTED: uncharacterized protein LOC100247652 [Vitis vinifera] Length = 584 Score = 59.7 bits (143), Expect = 2e-07 Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 19/106 (17%) Frame = +2 Query: 68 LDEQFDDGVNDEEIRYLEKLRSLKVTSDCDFNYADGED---KHQRKVLR-------DGKK 217 LD DD NDEEI+YLEKL++ KV++D Y D E+ + QRK+ R KK Sbjct: 289 LDGAEDDEDNDEEIKYLEKLKTSKVSTDYGAEYEDEEEDGGRKQRKISRVLKRNGNGHKK 348 Query: 218 SRSERQSENKD-LVEEELISD--------VLQKDYIYSSVGAKKEM 328 SRS R E+ D + EEE +SD L+K+++ SS +K+EM Sbjct: 349 SRSGRAYEDIDYMEEEEALSDGEPETKKKKLRKEFVDSSGDSKREM 394 >ref|XP_002318948.1| predicted protein [Populus trichocarpa] gi|222857324|gb|EEE94871.1| predicted protein [Populus trichocarpa] Length = 539 Score = 57.0 bits (136), Expect = 2e-06 Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 36/145 (24%) Frame = +2 Query: 2 AGKKTDKSEXXXXXXXXXXXXXLDEQFDDG-VNDEEIRYLEKLRSLKVTSD--CDFNYAD 172 + K+TD+ E LD DDG +D+EIRYLEK+++LK+++D +F + Sbjct: 206 SSKQTDQYEPVRKSKRVPKKRLLDGVLDDGGEDDDEIRYLEKVKTLKISTDYGAEFEDEE 265 Query: 173 GEDKHQRKVLR------------------------DGKKSRSERQSENKDLVEEELI--- 271 G + QRK+ R +GKKS+S R SE+ D VEEE + Sbjct: 266 GGSRKQRKISRVLKRNVDGLYDVDAGDHGSTRFGKEGKKSKSGRVSEDTDYVEEEELGSD 325 Query: 272 ------SDVLQKDYIYSSVGAKKEM 328 + +K+ SV +KKEM Sbjct: 326 GDPTSKNKKPRKELADLSVDSKKEM 350 >emb|CBI39598.3| unnamed protein product [Vitis vinifera] Length = 1097 Score = 55.1 bits (131), Expect = 6e-06 Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 36/123 (29%) Frame = +2 Query: 68 LDEQFDDGVNDEEIRYLEKLRSLKVTSDCDFNYADGED---KHQRKVLR----------- 205 LD DD NDEEI+YLEKL++ KV++D Y D E+ + QRK+ R Sbjct: 289 LDGAEDDEDNDEEIKYLEKLKTSKVSTDYGAEYEDEEEDGGRKQRKISRVLKRNGNGQYN 348 Query: 206 -------------DGKKSRSERQSENKD-LVEEELISD--------VLQKDYIYSSVGAK 319 + KKSRS R E+ D + EEE +SD L+K+++ SS +K Sbjct: 349 VDVGDFGSSKGSKESKKSRSGRAYEDIDYMEEEEALSDGEPETKKKKLRKEFVDSSGDSK 408 Query: 320 KEM 328 +EM Sbjct: 409 REM 411