BLASTX nr result

ID: Coptis25_contig00023020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023020
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282065.2| PREDICTED: uncharacterized protein LOC100247...    60   2e-07
ref|XP_002318948.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
emb|CBI39598.3| unnamed protein product [Vitis vinifera]               55   6e-06

>ref|XP_002282065.2| PREDICTED: uncharacterized protein LOC100247652 [Vitis vinifera]
          Length = 584

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 19/106 (17%)
 Frame = +2

Query: 68  LDEQFDDGVNDEEIRYLEKLRSLKVTSDCDFNYADGED---KHQRKVLR-------DGKK 217
           LD   DD  NDEEI+YLEKL++ KV++D    Y D E+   + QRK+ R         KK
Sbjct: 289 LDGAEDDEDNDEEIKYLEKLKTSKVSTDYGAEYEDEEEDGGRKQRKISRVLKRNGNGHKK 348

Query: 218 SRSERQSENKD-LVEEELISD--------VLQKDYIYSSVGAKKEM 328
           SRS R  E+ D + EEE +SD         L+K+++ SS  +K+EM
Sbjct: 349 SRSGRAYEDIDYMEEEEALSDGEPETKKKKLRKEFVDSSGDSKREM 394


>ref|XP_002318948.1| predicted protein [Populus trichocarpa] gi|222857324|gb|EEE94871.1|
           predicted protein [Populus trichocarpa]
          Length = 539

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 36/145 (24%)
 Frame = +2

Query: 2   AGKKTDKSEXXXXXXXXXXXXXLDEQFDDG-VNDEEIRYLEKLRSLKVTSD--CDFNYAD 172
           + K+TD+ E             LD   DDG  +D+EIRYLEK+++LK+++D   +F   +
Sbjct: 206 SSKQTDQYEPVRKSKRVPKKRLLDGVLDDGGEDDDEIRYLEKVKTLKISTDYGAEFEDEE 265

Query: 173 GEDKHQRKVLR------------------------DGKKSRSERQSENKDLVEEELI--- 271
           G  + QRK+ R                        +GKKS+S R SE+ D VEEE +   
Sbjct: 266 GGSRKQRKISRVLKRNVDGLYDVDAGDHGSTRFGKEGKKSKSGRVSEDTDYVEEEELGSD 325

Query: 272 ------SDVLQKDYIYSSVGAKKEM 328
                 +   +K+    SV +KKEM
Sbjct: 326 GDPTSKNKKPRKELADLSVDSKKEM 350


>emb|CBI39598.3| unnamed protein product [Vitis vinifera]
          Length = 1097

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 36/123 (29%)
 Frame = +2

Query: 68  LDEQFDDGVNDEEIRYLEKLRSLKVTSDCDFNYADGED---KHQRKVLR----------- 205
           LD   DD  NDEEI+YLEKL++ KV++D    Y D E+   + QRK+ R           
Sbjct: 289 LDGAEDDEDNDEEIKYLEKLKTSKVSTDYGAEYEDEEEDGGRKQRKISRVLKRNGNGQYN 348

Query: 206 -------------DGKKSRSERQSENKD-LVEEELISD--------VLQKDYIYSSVGAK 319
                        + KKSRS R  E+ D + EEE +SD         L+K+++ SS  +K
Sbjct: 349 VDVGDFGSSKGSKESKKSRSGRAYEDIDYMEEEEALSDGEPETKKKKLRKEFVDSSGDSK 408

Query: 320 KEM 328
           +EM
Sbjct: 409 REM 411


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