BLASTX nr result

ID: Coptis25_contig00022993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022993
         (1377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521918.1| conserved hypothetical protein [Ricinus comm...   659   0.0  
ref|XP_002265018.1| PREDICTED: kelch repeat-containing protein A...   643   0.0  
ref|XP_004144425.1| PREDICTED: kelch repeat-containing protein A...   639   0.0  
ref|XP_002316438.1| predicted protein [Populus trichocarpa] gi|2...   630   e-178
emb|CBI40071.3| unnamed protein product [Vitis vinifera]              629   e-178

>ref|XP_002521918.1| conserved hypothetical protein [Ricinus communis]
            gi|223538843|gb|EEF40442.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 425

 Score =  659 bits (1700), Expect = 0.0
 Identities = 304/351 (86%), Positives = 329/351 (93%), Gaps = 3/351 (0%)
 Frame = +3

Query: 78   DKVKEKI---VVSATFADLPGPQLEWEKMASAPVPRLDGAAIQIDNLLFVFAGYGTIDYV 248
            DK K+ I    +SATFADLP P L+WEKM SAPVPRLDGAAIQI NLL+VFAGYGTIDYV
Sbjct: 73   DKDKKDIPERFLSATFADLPAPDLKWEKMTSAPVPRLDGAAIQIKNLLYVFAGYGTIDYV 132

Query: 249  HTHVDVYNFSDNSWGRRFDMPKEMAHSHLGMATDGRYIYVVTGQYGPQCRGPTAHTFVLD 428
            H+HVD+YNF+DN+WG+RFDMPKEMAHSHLGM TDGRYIYVV+GQYGPQCRGPTAHTFVLD
Sbjct: 133  HSHVDIYNFTDNTWGKRFDMPKEMAHSHLGMVTDGRYIYVVSGQYGPQCRGPTAHTFVLD 192

Query: 429  TKTRQWRDMLPLPVPRYAPATQLWRGRLHVMGGSKEDRHEPSLEHWSIAVKNGKVLEKEW 608
            T+T+QW+DM PLPVPRYAPATQLWRGRLHVMGGSKE+RH P LEHWS+AVK+GK LEKEW
Sbjct: 193  TETKQWQDMPPLPVPRYAPATQLWRGRLHVMGGSKENRHTPGLEHWSLAVKDGKALEKEW 252

Query: 609  RNEIPIPRGGPHRACVVVNDQLIVIGGQEGDFMAKPGSPIFKCSRRNEVVYGDVYMLDDD 788
            R EIPIPRGGPHRACVVVNDQLIVIGGQEGDFMAKPGSPIFKCSRRNEVVYGDVYMLDDD
Sbjct: 253  RTEIPIPRGGPHRACVVVNDQLIVIGGQEGDFMAKPGSPIFKCSRRNEVVYGDVYMLDDD 312

Query: 789  MKWKGLPSMPKPDSHIEFAWAIVNNSIVIAGGTTDKHPVTKKMVLNGEIFQFNLNTLKWS 968
            MKWK LPSMPKPDSHIEFAW +VNNSIVI GGTTDKHPVTKKM+LNGE+FQFNL+  KWS
Sbjct: 313  MKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTDKHPVTKKMILNGEVFQFNLDNTKWS 372

Query: 969  VVGKLPFRVKTTLVGFWDGWFYFTSGQRDRGPDDPAPRKVLGDMFRTKLKL 1121
            V+GKLP+RVKTTLVGFW+GW YFTSGQRDRGPDDPAPRKVLG+M+RTKLKL
Sbjct: 373  VIGKLPYRVKTTLVGFWNGWLYFTSGQRDRGPDDPAPRKVLGEMWRTKLKL 423


>ref|XP_002265018.1| PREDICTED: kelch repeat-containing protein At3g27220 [Vitis vinifera]
            gi|297735771|emb|CBI18458.3| unnamed protein product
            [Vitis vinifera]
          Length = 426

 Score =  643 bits (1659), Expect = 0.0
 Identities = 303/388 (78%), Positives = 340/388 (87%), Gaps = 15/388 (3%)
 Frame = +3

Query: 3    SSSPLSIASTWYLQNSR-TVTVPNNF-----------DKVKEKI---VVSATFADLPGPQ 137
            SS   SIA+ W   +SR TV VP+             DK K  +   V+SATFADLP P+
Sbjct: 39   SSGYHSIATNWAFDDSRSTVIVPHQQPQKAKEGSDVKDKKKADVPERVLSATFADLPAPE 98

Query: 138  LEWEKMASAPVPRLDGAAIQIDNLLFVFAGYGTIDYVHTHVDVYNFSDNSWGRRFDMPKE 317
            LEWEKMA APVPRLDGAAIQI NLL+VFAGYGTID+VH+HVDVYNF+DN+WG RFDMPKE
Sbjct: 99   LEWEKMAPAPVPRLDGAAIQIKNLLYVFAGYGTIDFVHSHVDVYNFTDNTWGGRFDMPKE 158

Query: 318  MAHSHLGMATDGRYIYVVTGQYGPQCRGPTAHTFVLDTKTRQWRDMLPLPVPRYAPATQL 497
            MAHSHLGM TDGRYIYVVTGQYGPQCRGPTA TFVLDTKT+QW DM PLPVPRYAPATQL
Sbjct: 159  MAHSHLGMVTDGRYIYVVTGQYGPQCRGPTARTFVLDTKTKQWSDMPPLPVPRYAPATQL 218

Query: 498  WRGRLHVMGGSKEDRHEPSLEHWSIAVKNGKVLEKEWRNEIPIPRGGPHRACVVVNDQLI 677
            WRGRLHVMGGS E+RH P+LEHWS+AVKNGK LEKEWR+EIPIPRGGPHRAC+VV+D+L+
Sbjct: 219  WRGRLHVMGGSGENRHTPALEHWSLAVKNGKALEKEWRSEIPIPRGGPHRACIVVDDRLL 278

Query: 678  VIGGQEGDFMAKPGSPIFKCSRRNEVVYGDVYMLDDDMKWKGLPSMPKPDSHIEFAWAIV 857
            VIGGQEGDFMAKPGSPIFKCSRRNEVV+ DVYMLDD+MKWK LP MPKPDSHIEFAW +V
Sbjct: 279  VIGGQEGDFMAKPGSPIFKCSRRNEVVFSDVYMLDDEMKWKNLPPMPKPDSHIEFAWVMV 338

Query: 858  NNSIVIAGGTTDKHPVTKKMVLNGEIFQFNLNTLKWSVVGKLPFRVKTTLVGFWDGWFYF 1037
            N+SI+I GGTT+KHP+TKKMVL GE+FQFNL++LKWSV+GKLP+RVKTTL GFW+GW YF
Sbjct: 339  NHSIIIVGGTTEKHPITKKMVLVGEVFQFNLDSLKWSVIGKLPYRVKTTLAGFWNGWLYF 398

Query: 1038 TSGQRDRGPDDPAPRKVLGDMFRTKLKL 1121
            TSGQRD+GPDDPAP+KVLG+M+RTKL L
Sbjct: 399  TSGQRDKGPDDPAPKKVLGEMWRTKLSL 426


>ref|XP_004144425.1| PREDICTED: kelch repeat-containing protein At3g27220-like [Cucumis
            sativus]
          Length = 427

 Score =  639 bits (1647), Expect = 0.0
 Identities = 303/388 (78%), Positives = 337/388 (86%), Gaps = 16/388 (4%)
 Frame = +3

Query: 6    SSPLSIASTW----YLQNSRTVTV-PNNFDKVKEKIV-----------VSATFADLPGPQ 137
            S  LSIAS W    +   S  VT  P++ +  K +             +SATFADLP P+
Sbjct: 38   SYSLSIASNWAPPYHPDTSIPVTTKPDSANPTKGEAAKGGKDVNPGRALSATFADLPAPE 97

Query: 138  LEWEKMASAPVPRLDGAAIQIDNLLFVFAGYGTIDYVHTHVDVYNFSDNSWGRRFDMPKE 317
            L W+KM +APVPRLDGAAIQI NLLFVFAGYGTID VH+HVDVYNF+DN+WG RFDMPKE
Sbjct: 98   LTWKKMTTAPVPRLDGAAIQIKNLLFVFAGYGTIDSVHSHVDVYNFTDNTWGGRFDMPKE 157

Query: 318  MAHSHLGMATDGRYIYVVTGQYGPQCRGPTAHTFVLDTKTRQWRDMLPLPVPRYAPATQL 497
            MAHSHLGMATDGRYIYVVTGQYGPQCRGPTAHTFVLDT+TRQW+DM PLPVPRYAPATQL
Sbjct: 158  MAHSHLGMATDGRYIYVVTGQYGPQCRGPTAHTFVLDTETRQWQDMPPLPVPRYAPATQL 217

Query: 498  WRGRLHVMGGSKEDRHEPSLEHWSIAVKNGKVLEKEWRNEIPIPRGGPHRACVVVNDQLI 677
            WRGRLHVMGGS E+RH P+LEHWS+AVK+GK LEKEWR+EIPIPRGGPHRAC+VV+D+L 
Sbjct: 218  WRGRLHVMGGSMENRHTPALEHWSLAVKDGKALEKEWRSEIPIPRGGPHRACIVVDDRLY 277

Query: 678  VIGGQEGDFMAKPGSPIFKCSRRNEVVYGDVYMLDDDMKWKGLPSMPKPDSHIEFAWAIV 857
            VIGGQEGDFMAKPGSPIFKCSRRNEVVY DVYMLDDDMKWK LPSMPKPDSHIEFAW +V
Sbjct: 278  VIGGQEGDFMAKPGSPIFKCSRRNEVVYSDVYMLDDDMKWKVLPSMPKPDSHIEFAWVVV 337

Query: 858  NNSIVIAGGTTDKHPVTKKMVLNGEIFQFNLNTLKWSVVGKLPFRVKTTLVGFWDGWFYF 1037
            NNSIVI GGTTDKHP TKKMVLNGE+FQF+L   +WSV+GKLPFRVKTTLVG+WDGW YF
Sbjct: 338  NNSIVIVGGTTDKHPQTKKMVLNGEVFQFSLRLQQWSVIGKLPFRVKTTLVGYWDGWLYF 397

Query: 1038 TSGQRDRGPDDPAPRKVLGDMFRTKLKL 1121
            TSGQRD+GPDDP+P+KV+G+M+RTKLKL
Sbjct: 398  TSGQRDKGPDDPSPKKVIGEMWRTKLKL 425


>ref|XP_002316438.1| predicted protein [Populus trichocarpa] gi|222865478|gb|EEF02609.1|
            predicted protein [Populus trichocarpa]
          Length = 424

 Score =  630 bits (1624), Expect = e-178
 Identities = 285/340 (83%), Positives = 322/340 (94%)
 Frame = +3

Query: 102  VSATFADLPGPQLEWEKMASAPVPRLDGAAIQIDNLLFVFAGYGTIDYVHTHVDVYNFSD 281
            +SATFADLP P+L+WEKMA+APVPRLDGAAIQI +LL+VFAGYGTID VH+HVD+YNF+D
Sbjct: 83   LSATFADLPAPELKWEKMANAPVPRLDGAAIQIKDLLYVFAGYGTIDLVHSHVDIYNFTD 142

Query: 282  NSWGRRFDMPKEMAHSHLGMATDGRYIYVVTGQYGPQCRGPTAHTFVLDTKTRQWRDMLP 461
            N+WGRRF+MPKEMAHSHLGM TDGRYIYVVTGQYGPQCRGPTA  FVLDTKT+QW+D+ P
Sbjct: 143  NTWGRRFNMPKEMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTARNFVLDTKTKQWQDLPP 202

Query: 462  LPVPRYAPATQLWRGRLHVMGGSKEDRHEPSLEHWSIAVKNGKVLEKEWRNEIPIPRGGP 641
            LPVPRYAPATQLWRGRLHVMGGSKE+RH P+LEHWS+AVK+GK LEKEWR EIPIPRGGP
Sbjct: 203  LPVPRYAPATQLWRGRLHVMGGSKENRHTPALEHWSLAVKDGKALEKEWRPEIPIPRGGP 262

Query: 642  HRACVVVNDQLIVIGGQEGDFMAKPGSPIFKCSRRNEVVYGDVYMLDDDMKWKGLPSMPK 821
            HRACVVV+D+L++IGGQEGDFMAKPGSPIFKCSRRNE+VY +V+MLDD+MKWK LP MPK
Sbjct: 263  HRACVVVSDRLLIIGGQEGDFMAKPGSPIFKCSRRNEIVYDEVHMLDDEMKWKPLPPMPK 322

Query: 822  PDSHIEFAWAIVNNSIVIAGGTTDKHPVTKKMVLNGEIFQFNLNTLKWSVVGKLPFRVKT 1001
            PDSHIEFAWAIVNNSIVIAGGTT+KHP TKKMVL GE+F+FNL+TL WSV+GKLP+RVKT
Sbjct: 323  PDSHIEFAWAIVNNSIVIAGGTTEKHPTTKKMVLVGEVFRFNLDTLTWSVIGKLPYRVKT 382

Query: 1002 TLVGFWDGWFYFTSGQRDRGPDDPAPRKVLGDMFRTKLKL 1121
            TLVGFW+GW YFTSGQRDRGPDDPAP+KV+ DM+RTKL+L
Sbjct: 383  TLVGFWNGWLYFTSGQRDRGPDDPAPKKVIADMWRTKLRL 422


>emb|CBI40071.3| unnamed protein product [Vitis vinifera]
          Length = 431

 Score =  629 bits (1622), Expect = e-178
 Identities = 289/382 (75%), Positives = 333/382 (87%), Gaps = 13/382 (3%)
 Frame = +3

Query: 15   LSIASTWYLQNSRTVTVPNNFDK-------VKEKI------VVSATFADLPGPQLEWEKM 155
            LSIAS W L  S TV +P NFD+       VK+K       ++SATFADLP P+L+WE+M
Sbjct: 42   LSIASNWALTKSSTVVIPTNFDEKLQQRVDVKDKKNRTSGRILSATFADLPAPELKWEEM 101

Query: 156  ASAPVPRLDGAAIQIDNLLFVFAGYGTIDYVHTHVDVYNFSDNSWGRRFDMPKEMAHSHL 335
              APVPRLDGA+IQI NLL+VFAGYGT++YVH+HVD+YN +DN+WG RFDMPKEMAHSHL
Sbjct: 102  QPAPVPRLDGASIQIKNLLYVFAGYGTLNYVHSHVDIYNITDNAWGGRFDMPKEMAHSHL 161

Query: 336  GMATDGRYIYVVTGQYGPQCRGPTAHTFVLDTKTRQWRDMLPLPVPRYAPATQLWRGRLH 515
            GMATDGRYIY+V+GQYGPQCRGPTA  FVLDT+T++W+D+  LP PRYAPATQLWRGRLH
Sbjct: 162  GMATDGRYIYIVSGQYGPQCRGPTARCFVLDTETKKWQDLPTLPAPRYAPATQLWRGRLH 221

Query: 516  VMGGSKEDRHEPSLEHWSIAVKNGKVLEKEWRNEIPIPRGGPHRACVVVNDQLIVIGGQE 695
            VMGG KE+RH P LEHWS+AVKNGK LEKEWR+EIPIPRGGPHRACVVV+D+L VIGGQE
Sbjct: 222  VMGGGKENRHTPGLEHWSLAVKNGKALEKEWRSEIPIPRGGPHRACVVVDDRLFVIGGQE 281

Query: 696  GDFMAKPGSPIFKCSRRNEVVYGDVYMLDDDMKWKGLPSMPKPDSHIEFAWAIVNNSIVI 875
            GDFMAKPGSPIFKCSRR+EVVY DVYMLDD+MKWK LP MPKPDSHIEFAW +VNNSI+I
Sbjct: 282  GDFMAKPGSPIFKCSRRHEVVYEDVYMLDDEMKWKVLPPMPKPDSHIEFAWVVVNNSIII 341

Query: 876  AGGTTDKHPVTKKMVLNGEIFQFNLNTLKWSVVGKLPFRVKTTLVGFWDGWFYFTSGQRD 1055
             GGTT+KHPVTK+M+L GE+FQF+L++LKWSV+GK+PFR KTTL  FWDGW YFTSGQRD
Sbjct: 342  VGGTTEKHPVTKRMILVGEVFQFHLDSLKWSVIGKMPFRAKTTLAAFWDGWLYFTSGQRD 401

Query: 1056 RGPDDPAPRKVLGDMFRTKLKL 1121
            RGPD+P PRKV+GDM+RTKL L
Sbjct: 402  RGPDNPQPRKVIGDMWRTKLFL 423


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