BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022990
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22720.3| unnamed protein product [Vitis vinifera]              192   3e-47
ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s...   183   1e-44
emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera]   183   1e-44
emb|CBI26210.3| unnamed protein product [Vitis vinifera]              160   1e-37
emb|CAN75989.1| hypothetical protein VITISV_012194 [Vitis vinifera]   160   1e-37

>emb|CBI22720.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  192 bits (487), Expect = 3e-47
 Identities = 98/153 (64%), Positives = 123/153 (80%), Gaps = 1/153 (0%)
 Frame = -1

Query: 460 MVGQNGIMLAVNIISSHFGILVSKVCECLLRKGSLTIQNIVRFTELTPQQVKHSVLVLIQ 281
           M  Q G+ LAV++ISSHFG LV+KVC+CLLRKG+LT+ +++RFTEL PQQVK  +LVLIQ
Sbjct: 1   MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 280 HNCVQAFSFRSDEDDQGGVPK-GTHYVVIFENILHRLRFAKFSSIVSEQLDKESEELLEG 104
           HNCVQAF+ +  E   G  P+  T Y+ +F NILHR+RFAKF +IVSE+LDKE EE+LEG
Sbjct: 61  HNCVQAFAIQ-QEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEG 119

Query: 103 LLQHGRLTLEQIILRALSKRNEGDCAIQDVLRE 5
           LLQHGRLTLEQI+ RA S ++EG+  +QD LRE
Sbjct: 120 LLQHGRLTLEQILDRAKSNQSEGEPVVQDALRE 152


>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
           vinifera]
          Length = 511

 Score =  183 bits (464), Expect = 1e-44
 Identities = 95/153 (62%), Positives = 120/153 (78%), Gaps = 1/153 (0%)
 Frame = -1

Query: 460 MVGQNGIMLAVNIISSHFGILVSKVCECLLRKGSLTIQNIVRFTELTPQQVKHSVLVLIQ 281
           M  Q G+ LAV++ISSHFG LV+KVC+CLLRKG+LT+ +++RFTEL PQQVK  +LVLIQ
Sbjct: 1   MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 280 HNCVQAFSFRSDEDDQGGVPK-GTHYVVIFENILHRLRFAKFSSIVSEQLDKESEELLEG 104
           HNCVQAF+ + +       P+  T Y+ +F NILHR+RFAKF +IVSE+LDKE EE+LEG
Sbjct: 61  HNCVQAFAIQQE------APRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEG 114

Query: 103 LLQHGRLTLEQIILRALSKRNEGDCAIQDVLRE 5
           LLQHGRLTLEQI+ RA  K N+ +  +QD LRE
Sbjct: 115 LLQHGRLTLEQILDRA--KSNQREPVVQDALRE 145


>emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera]
          Length = 721

 Score =  183 bits (464), Expect = 1e-44
 Identities = 96/153 (62%), Positives = 120/153 (78%), Gaps = 1/153 (0%)
 Frame = -1

Query: 460 MVGQNGIMLAVNIISSHFGILVSKVCECLLRKGSLTIQNIVRFTELTPQQVKHSVLVLIQ 281
           M  Q G+ LAV++ISSHFG LV+KVC+CLLRKG+ T+ +++RFTEL PQQVK  +LVLIQ
Sbjct: 1   MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTXTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 280 HNCVQAFSFRSDEDDQGGVPK-GTHYVVIFENILHRLRFAKFSSIVSEQLDKESEELLEG 104
           HNCVQAF+ +  E   G  P+  T Y+ +F NILHR+RFAKF +IVSE+LDKE EE+LEG
Sbjct: 61  HNCVQAFAIQ-QEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEG 119

Query: 103 LLQHGRLTLEQIILRALSKRNEGDCAIQDVLRE 5
           LLQHGRLTLEQI+ RA  K N+ +  +QD LRE
Sbjct: 120 LLQHGRLTLEQILDRA--KSNQREPVVQDALRE 150


>emb|CBI26210.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  160 bits (405), Expect = 1e-37
 Identities = 83/155 (53%), Positives = 113/155 (72%), Gaps = 4/155 (2%)
 Frame = -1

Query: 460 MVGQNGIMLAVNIISSHFGILVSKVCECLLRKGSLTIQNIVRFTELTPQQVKHSVLVLIQ 281
           M  + GI LAV++IS+ FG   +KVC+CLLRKG+L + +IVR  +L+PQQVK  + VLIQ
Sbjct: 1   MTPEYGIKLAVHLISTDFGDHAAKVCDCLLRKGTLALDDIVRTAKLSPQQVKTYLKVLIQ 60

Query: 280 HNCVQAFSFRSDEDDQGGVPKG----THYVVIFENILHRLRFAKFSSIVSEQLDKESEEL 113
           HNCVQAF+     + +GG  +G    T Y+++F+NILHR+RF K  +IVS++LDKE EEL
Sbjct: 61  HNCVQAFAM----EHEGGCGEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEEL 116

Query: 112 LEGLLQHGRLTLEQIILRALSKRNEGDCAIQDVLR 8
            E  L+HG LTL+QI+ R  S +NEG+C +QD LR
Sbjct: 117 FEAFLKHGWLTLQQILDRVPSNQNEGNCTVQDALR 151


>emb|CAN75989.1| hypothetical protein VITISV_012194 [Vitis vinifera]
          Length = 549

 Score =  160 bits (404), Expect = 1e-37
 Identities = 82/155 (52%), Positives = 114/155 (73%), Gaps = 4/155 (2%)
 Frame = -1

Query: 460 MVGQNGIMLAVNIISSHFGILVSKVCECLLRKGSLTIQNIVRFTELTPQQVKHSVLVLIQ 281
           M  + GI LAV++IS+ FG   +KVC+CL+RKG+L + +IVR T+L+PQQVK  + VLIQ
Sbjct: 1   MTPEYGIKLAVHLISTDFGDHAAKVCDCLIRKGTLALDDIVRTTKLSPQQVKTYLKVLIQ 60

Query: 280 HNCVQAFSFRSDEDDQGGVPKG----THYVVIFENILHRLRFAKFSSIVSEQLDKESEEL 113
           HNCVQAF+     + +GG  +G    T Y+++F+NILHR+RF K  +IVS++LDKE E+L
Sbjct: 61  HNCVQAFAM----EHEGGCGEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEKL 116

Query: 112 LEGLLQHGRLTLEQIILRALSKRNEGDCAIQDVLR 8
            E  L+HG LTL+QI+ R  S +NEG+C +QD LR
Sbjct: 117 FEAFLKHGWLTLQQILDRVPSNQNEGNCTVQDALR 151