BLASTX nr result

ID: Coptis25_contig00022970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022970
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269028.1| PREDICTED: uncharacterized protein LOC100246...   164   5e-39
gb|AAG51706.1|AC066689_5 unknown protein; 10133-7338 [Arabidopsi...   163   1e-38
gb|AAF19667.1|AC009519_1 F1N19.1 [Arabidopsis thaliana]               163   1e-38
ref|NP_176624.2| pentatricopeptide repeat-containing protein [Ar...   163   1e-38
ref|XP_002299470.1| predicted protein [Populus trichocarpa] gi|2...   163   2e-38

>ref|XP_002269028.1| PREDICTED: uncharacterized protein LOC100246151 [Vitis vinifera]
           gi|297742341|emb|CBI34490.3| unnamed protein product
           [Vitis vinifera]
          Length = 558

 Score =  164 bits (416), Expect = 5e-39
 Identities = 84/101 (83%), Positives = 92/101 (91%)
 Frame = +1

Query: 1   LPQRMVEVVAIKQQLLSQYDLLQIRINDLREAAEKEVWMLARMCQLENKILAVGEPSYRA 180
           LPQR V+ +AIKQQLLSQYD+LQ RI DL+ AAEKEVWMLARMCQLENKILA+GEPSYRA
Sbjct: 403 LPQRTVDTIAIKQQLLSQYDMLQSRIKDLKGAAEKEVWMLARMCQLENKILAIGEPSYRA 462

Query: 181 RRSRLVKVRESLENSLMGRIELIDSYARISSMIEIELEMDS 303
           R+SR+ KVRE LENSL GRIELIDSYARISSMIEIE+EM S
Sbjct: 463 RKSRVKKVREGLENSLKGRIELIDSYARISSMIEIEVEMAS 503


>gb|AAG51706.1|AC066689_5 unknown protein; 10133-7338 [Arabidopsis thaliana]
          Length = 547

 Score =  163 bits (413), Expect = 1e-38
 Identities = 82/101 (81%), Positives = 93/101 (92%)
 Frame = +1

Query: 1   LPQRMVEVVAIKQQLLSQYDLLQIRINDLREAAEKEVWMLARMCQLENKILAVGEPSYRA 180
           LP+R V+VV IKQQLLSQYD+LQ RI DL+EA EKEVWMLARMCQLENKILAVGEP+YR 
Sbjct: 398 LPERTVDVVGIKQQLLSQYDVLQRRIRDLKEAVEKEVWMLARMCQLENKILAVGEPAYRT 457

Query: 181 RRSRLVKVRESLENSLMGRIELIDSYARISSMIEIELEMDS 303
           RR+R+ KVRESLENS+ G+I+LIDSYARISSMIEIE+EMDS
Sbjct: 458 RRTRVKKVRESLENSIKGKIDLIDSYARISSMIEIEVEMDS 498


>gb|AAF19667.1|AC009519_1 F1N19.1 [Arabidopsis thaliana]
          Length = 521

 Score =  163 bits (413), Expect = 1e-38
 Identities = 82/101 (81%), Positives = 93/101 (92%)
 Frame = +1

Query: 1   LPQRMVEVVAIKQQLLSQYDLLQIRINDLREAAEKEVWMLARMCQLENKILAVGEPSYRA 180
           LP+R V+VV IKQQLLSQYD+LQ RI DL+EA EKEVWMLARMCQLENKILAVGEP+YR 
Sbjct: 391 LPERTVDVVGIKQQLLSQYDVLQRRIRDLKEAVEKEVWMLARMCQLENKILAVGEPAYRT 450

Query: 181 RRSRLVKVRESLENSLMGRIELIDSYARISSMIEIELEMDS 303
           RR+R+ KVRESLENS+ G+I+LIDSYARISSMIEIE+EMDS
Sbjct: 451 RRTRVKKVRESLENSIKGKIDLIDSYARISSMIEIEVEMDS 491


>ref|NP_176624.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|79320695|ref|NP_001031231.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|17529266|gb|AAL38860.1| unknown protein [Arabidopsis
           thaliana] gi|23296917|gb|AAN13202.1| unknown protein
           [Arabidopsis thaliana] gi|332196118|gb|AEE34239.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana] gi|332196119|gb|AEE34240.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  163 bits (413), Expect = 1e-38
 Identities = 82/101 (81%), Positives = 93/101 (92%)
 Frame = +1

Query: 1   LPQRMVEVVAIKQQLLSQYDLLQIRINDLREAAEKEVWMLARMCQLENKILAVGEPSYRA 180
           LP+R V+VV IKQQLLSQYD+LQ RI DL+EA EKEVWMLARMCQLENKILAVGEP+YR 
Sbjct: 410 LPERTVDVVGIKQQLLSQYDVLQRRIRDLKEAVEKEVWMLARMCQLENKILAVGEPAYRT 469

Query: 181 RRSRLVKVRESLENSLMGRIELIDSYARISSMIEIELEMDS 303
           RR+R+ KVRESLENS+ G+I+LIDSYARISSMIEIE+EMDS
Sbjct: 470 RRTRVKKVRESLENSIKGKIDLIDSYARISSMIEIEVEMDS 510


>ref|XP_002299470.1| predicted protein [Populus trichocarpa] gi|222846728|gb|EEE84275.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score =  163 bits (412), Expect = 2e-38
 Identities = 83/101 (82%), Positives = 92/101 (91%)
 Frame = +1

Query: 1   LPQRMVEVVAIKQQLLSQYDLLQIRINDLREAAEKEVWMLARMCQLENKILAVGEPSYRA 180
           LPQ+ V+  AIKQ+LLSQYDLLQ RI +L+EAAEKEVWMLARMCQLENKI AVGEPSYRA
Sbjct: 428 LPQKSVDATAIKQKLLSQYDLLQSRIKELKEAAEKEVWMLARMCQLENKIFAVGEPSYRA 487

Query: 181 RRSRLVKVRESLENSLMGRIELIDSYARISSMIEIELEMDS 303
           RR+R+ +VRE LENSL GRIELIDSYARISSMIEIE+EMDS
Sbjct: 488 RRTRVKRVREGLENSLEGRIELIDSYARISSMIEIEVEMDS 528


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