BLASTX nr result
ID: Coptis25_contig00022970
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00022970 (305 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269028.1| PREDICTED: uncharacterized protein LOC100246... 164 5e-39 gb|AAG51706.1|AC066689_5 unknown protein; 10133-7338 [Arabidopsi... 163 1e-38 gb|AAF19667.1|AC009519_1 F1N19.1 [Arabidopsis thaliana] 163 1e-38 ref|NP_176624.2| pentatricopeptide repeat-containing protein [Ar... 163 1e-38 ref|XP_002299470.1| predicted protein [Populus trichocarpa] gi|2... 163 2e-38 >ref|XP_002269028.1| PREDICTED: uncharacterized protein LOC100246151 [Vitis vinifera] gi|297742341|emb|CBI34490.3| unnamed protein product [Vitis vinifera] Length = 558 Score = 164 bits (416), Expect = 5e-39 Identities = 84/101 (83%), Positives = 92/101 (91%) Frame = +1 Query: 1 LPQRMVEVVAIKQQLLSQYDLLQIRINDLREAAEKEVWMLARMCQLENKILAVGEPSYRA 180 LPQR V+ +AIKQQLLSQYD+LQ RI DL+ AAEKEVWMLARMCQLENKILA+GEPSYRA Sbjct: 403 LPQRTVDTIAIKQQLLSQYDMLQSRIKDLKGAAEKEVWMLARMCQLENKILAIGEPSYRA 462 Query: 181 RRSRLVKVRESLENSLMGRIELIDSYARISSMIEIELEMDS 303 R+SR+ KVRE LENSL GRIELIDSYARISSMIEIE+EM S Sbjct: 463 RKSRVKKVREGLENSLKGRIELIDSYARISSMIEIEVEMAS 503 >gb|AAG51706.1|AC066689_5 unknown protein; 10133-7338 [Arabidopsis thaliana] Length = 547 Score = 163 bits (413), Expect = 1e-38 Identities = 82/101 (81%), Positives = 93/101 (92%) Frame = +1 Query: 1 LPQRMVEVVAIKQQLLSQYDLLQIRINDLREAAEKEVWMLARMCQLENKILAVGEPSYRA 180 LP+R V+VV IKQQLLSQYD+LQ RI DL+EA EKEVWMLARMCQLENKILAVGEP+YR Sbjct: 398 LPERTVDVVGIKQQLLSQYDVLQRRIRDLKEAVEKEVWMLARMCQLENKILAVGEPAYRT 457 Query: 181 RRSRLVKVRESLENSLMGRIELIDSYARISSMIEIELEMDS 303 RR+R+ KVRESLENS+ G+I+LIDSYARISSMIEIE+EMDS Sbjct: 458 RRTRVKKVRESLENSIKGKIDLIDSYARISSMIEIEVEMDS 498 >gb|AAF19667.1|AC009519_1 F1N19.1 [Arabidopsis thaliana] Length = 521 Score = 163 bits (413), Expect = 1e-38 Identities = 82/101 (81%), Positives = 93/101 (92%) Frame = +1 Query: 1 LPQRMVEVVAIKQQLLSQYDLLQIRINDLREAAEKEVWMLARMCQLENKILAVGEPSYRA 180 LP+R V+VV IKQQLLSQYD+LQ RI DL+EA EKEVWMLARMCQLENKILAVGEP+YR Sbjct: 391 LPERTVDVVGIKQQLLSQYDVLQRRIRDLKEAVEKEVWMLARMCQLENKILAVGEPAYRT 450 Query: 181 RRSRLVKVRESLENSLMGRIELIDSYARISSMIEIELEMDS 303 RR+R+ KVRESLENS+ G+I+LIDSYARISSMIEIE+EMDS Sbjct: 451 RRTRVKKVRESLENSIKGKIDLIDSYARISSMIEIEVEMDS 491 >ref|NP_176624.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|79320695|ref|NP_001031231.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|17529266|gb|AAL38860.1| unknown protein [Arabidopsis thaliana] gi|23296917|gb|AAN13202.1| unknown protein [Arabidopsis thaliana] gi|332196118|gb|AEE34239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|332196119|gb|AEE34240.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 559 Score = 163 bits (413), Expect = 1e-38 Identities = 82/101 (81%), Positives = 93/101 (92%) Frame = +1 Query: 1 LPQRMVEVVAIKQQLLSQYDLLQIRINDLREAAEKEVWMLARMCQLENKILAVGEPSYRA 180 LP+R V+VV IKQQLLSQYD+LQ RI DL+EA EKEVWMLARMCQLENKILAVGEP+YR Sbjct: 410 LPERTVDVVGIKQQLLSQYDVLQRRIRDLKEAVEKEVWMLARMCQLENKILAVGEPAYRT 469 Query: 181 RRSRLVKVRESLENSLMGRIELIDSYARISSMIEIELEMDS 303 RR+R+ KVRESLENS+ G+I+LIDSYARISSMIEIE+EMDS Sbjct: 470 RRTRVKKVRESLENSIKGKIDLIDSYARISSMIEIEVEMDS 510 >ref|XP_002299470.1| predicted protein [Populus trichocarpa] gi|222846728|gb|EEE84275.1| predicted protein [Populus trichocarpa] Length = 588 Score = 163 bits (412), Expect = 2e-38 Identities = 83/101 (82%), Positives = 92/101 (91%) Frame = +1 Query: 1 LPQRMVEVVAIKQQLLSQYDLLQIRINDLREAAEKEVWMLARMCQLENKILAVGEPSYRA 180 LPQ+ V+ AIKQ+LLSQYDLLQ RI +L+EAAEKEVWMLARMCQLENKI AVGEPSYRA Sbjct: 428 LPQKSVDATAIKQKLLSQYDLLQSRIKELKEAAEKEVWMLARMCQLENKIFAVGEPSYRA 487 Query: 181 RRSRLVKVRESLENSLMGRIELIDSYARISSMIEIELEMDS 303 RR+R+ +VRE LENSL GRIELIDSYARISSMIEIE+EMDS Sbjct: 488 RRTRVKRVREGLENSLEGRIELIDSYARISSMIEIEVEMDS 528