BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022967
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containi...   173   1e-41
ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containi...   157   6e-37
ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containi...   157   6e-37
ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containi...   156   2e-36
ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containi...   155   2e-36

>ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
           [Vitis vinifera] gi|296090299|emb|CBI40118.3| unnamed
           protein product [Vitis vinifera]
          Length = 618

 Score =  173 bits (438), Expect = 1e-41
 Identities = 80/111 (72%), Positives = 97/111 (87%)
 Frame = -1

Query: 334 EALDFIEEMPGKPDAILLGALLGSCKNFGNVEVGERVMCLLLELEPMNSGNYMISSKIYA 155
           EA DFIE+MP KPD ++LGALLG+C+   NV+V ERVM +LLE+EP+NSGNY+ISSKI+A
Sbjct: 485 EAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFA 544

Query: 154 NSKRWDESARMRGLMRERGVTKTPGCSWVEVENQVHEFHAGDGFHQISRKL 2
           N KRWD+SARMR LMR+RGVTKTPGCSW+E+ENQVHEFHAGD  H IS+ +
Sbjct: 545 NMKRWDDSARMRVLMRQRGVTKTPGCSWIEIENQVHEFHAGDVLHFISQDM 595


>ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  157 bits (398), Expect = 6e-37
 Identities = 69/106 (65%), Positives = 90/106 (84%)
 Frame = -1

Query: 334 EALDFIEEMPGKPDAILLGALLGSCKNFGNVEVGERVMCLLLELEPMNSGNYMISSKIYA 155
           EA DF+  MP KPD ++LGALLG+C+   N+++ ERVM LLLELEP NSGNY+ISSK+YA
Sbjct: 486 EAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYA 545

Query: 154 NSKRWDESARMRGLMRERGVTKTPGCSWVEVENQVHEFHAGDGFHQ 17
           N +RWD+SARMR LM+++GV+KTPGCSW+++ +Q+HEFHAGD  HQ
Sbjct: 546 NLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQ 591


>ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  157 bits (398), Expect = 6e-37
 Identities = 69/106 (65%), Positives = 90/106 (84%)
 Frame = -1

Query: 334 EALDFIEEMPGKPDAILLGALLGSCKNFGNVEVGERVMCLLLELEPMNSGNYMISSKIYA 155
           EA DF+  MP KPD ++LGALLG+C+   N+++ ERVM LLLELEP NSGNY+ISSK+YA
Sbjct: 486 EAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYA 545

Query: 154 NSKRWDESARMRGLMRERGVTKTPGCSWVEVENQVHEFHAGDGFHQ 17
           N +RWD+SARMR LM+++GV+KTPGCSW+++ +Q+HEFHAGD  HQ
Sbjct: 546 NLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQ 591


>ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Glycine max]
          Length = 608

 Score =  156 bits (394), Expect = 2e-36
 Identities = 69/103 (66%), Positives = 89/103 (86%)
 Frame = -1

Query: 334 EALDFIEEMPGKPDAILLGALLGSCKNFGNVEVGERVMCLLLELEPMNSGNYMISSKIYA 155
           EA D IE+MP KPD + LGALLG+C++  NV++GERV+ ++LE++P NSGNY+ISSKIYA
Sbjct: 476 EAWDLIEKMPEKPDKVTLGALLGACRSKKNVDIGERVIRMILEVDPSNSGNYIISSKIYA 535

Query: 154 NSKRWDESARMRGLMRERGVTKTPGCSWVEVENQVHEFHAGDG 26
           N   W++SARMR LMR++G+TKTPGCSW+EVEN +HEFHAGDG
Sbjct: 536 NLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGDG 578


>ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Glycine max]
          Length = 614

 Score =  155 bits (393), Expect = 2e-36
 Identities = 69/103 (66%), Positives = 88/103 (85%)
 Frame = -1

Query: 334 EALDFIEEMPGKPDAILLGALLGSCKNFGNVEVGERVMCLLLELEPMNSGNYMISSKIYA 155
           EA D I +MP KPD + LGALLG+C++  NV++GERVM ++LE++P NSGNY+ISSKIYA
Sbjct: 482 EAWDLIRKMPEKPDKVTLGALLGACRSKKNVDIGERVMRMILEVDPSNSGNYIISSKIYA 541

Query: 154 NSKRWDESARMRGLMRERGVTKTPGCSWVEVENQVHEFHAGDG 26
           N   W++SARMR LMR++G+TKTPGCSW+EVEN +HEFHAGDG
Sbjct: 542 NLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGDG 584