BLASTX nr result
ID: Coptis25_contig00022967
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00022967 (337 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containi... 173 1e-41 ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containi... 157 6e-37 ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containi... 157 6e-37 ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containi... 156 2e-36 ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containi... 155 2e-36 >ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400 [Vitis vinifera] gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera] Length = 618 Score = 173 bits (438), Expect = 1e-41 Identities = 80/111 (72%), Positives = 97/111 (87%) Frame = -1 Query: 334 EALDFIEEMPGKPDAILLGALLGSCKNFGNVEVGERVMCLLLELEPMNSGNYMISSKIYA 155 EA DFIE+MP KPD ++LGALLG+C+ NV+V ERVM +LLE+EP+NSGNY+ISSKI+A Sbjct: 485 EAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFA 544 Query: 154 NSKRWDESARMRGLMRERGVTKTPGCSWVEVENQVHEFHAGDGFHQISRKL 2 N KRWD+SARMR LMR+RGVTKTPGCSW+E+ENQVHEFHAGD H IS+ + Sbjct: 545 NMKRWDDSARMRVLMRQRGVTKTPGCSWIEIENQVHEFHAGDVLHFISQDM 595 >ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400-like [Cucumis sativus] Length = 619 Score = 157 bits (398), Expect = 6e-37 Identities = 69/106 (65%), Positives = 90/106 (84%) Frame = -1 Query: 334 EALDFIEEMPGKPDAILLGALLGSCKNFGNVEVGERVMCLLLELEPMNSGNYMISSKIYA 155 EA DF+ MP KPD ++LGALLG+C+ N+++ ERVM LLLELEP NSGNY+ISSK+YA Sbjct: 486 EAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYA 545 Query: 154 NSKRWDESARMRGLMRERGVTKTPGCSWVEVENQVHEFHAGDGFHQ 17 N +RWD+SARMR LM+++GV+KTPGCSW+++ +Q+HEFHAGD HQ Sbjct: 546 NLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQ 591 >ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400-like [Cucumis sativus] Length = 619 Score = 157 bits (398), Expect = 6e-37 Identities = 69/106 (65%), Positives = 90/106 (84%) Frame = -1 Query: 334 EALDFIEEMPGKPDAILLGALLGSCKNFGNVEVGERVMCLLLELEPMNSGNYMISSKIYA 155 EA DF+ MP KPD ++LGALLG+C+ N+++ ERVM LLLELEP NSGNY+ISSK+YA Sbjct: 486 EAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYA 545 Query: 154 NSKRWDESARMRGLMRERGVTKTPGCSWVEVENQVHEFHAGDGFHQ 17 N +RWD+SARMR LM+++GV+KTPGCSW+++ +Q+HEFHAGD HQ Sbjct: 546 NLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQ 591 >ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400-like [Glycine max] Length = 608 Score = 156 bits (394), Expect = 2e-36 Identities = 69/103 (66%), Positives = 89/103 (86%) Frame = -1 Query: 334 EALDFIEEMPGKPDAILLGALLGSCKNFGNVEVGERVMCLLLELEPMNSGNYMISSKIYA 155 EA D IE+MP KPD + LGALLG+C++ NV++GERV+ ++LE++P NSGNY+ISSKIYA Sbjct: 476 EAWDLIEKMPEKPDKVTLGALLGACRSKKNVDIGERVIRMILEVDPSNSGNYIISSKIYA 535 Query: 154 NSKRWDESARMRGLMRERGVTKTPGCSWVEVENQVHEFHAGDG 26 N W++SARMR LMR++G+TKTPGCSW+EVEN +HEFHAGDG Sbjct: 536 NLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGDG 578 >ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400-like [Glycine max] Length = 614 Score = 155 bits (393), Expect = 2e-36 Identities = 69/103 (66%), Positives = 88/103 (85%) Frame = -1 Query: 334 EALDFIEEMPGKPDAILLGALLGSCKNFGNVEVGERVMCLLLELEPMNSGNYMISSKIYA 155 EA D I +MP KPD + LGALLG+C++ NV++GERVM ++LE++P NSGNY+ISSKIYA Sbjct: 482 EAWDLIRKMPEKPDKVTLGALLGACRSKKNVDIGERVMRMILEVDPSNSGNYIISSKIYA 541 Query: 154 NSKRWDESARMRGLMRERGVTKTPGCSWVEVENQVHEFHAGDG 26 N W++SARMR LMR++G+TKTPGCSW+EVEN +HEFHAGDG Sbjct: 542 NLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGDG 584