BLASTX nr result
ID: Coptis25_contig00022953
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00022953 (337 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264062.1| PREDICTED: ATPase WRNIP1-like [Vitis vinifera] 77 1e-12 ref|XP_003618090.1| ATPase WRNIP1 [Medicago truncatula] gi|35551... 74 2e-11 ref|XP_003545063.1| PREDICTED: ATPase WRNIP1-like [Glycine max] 73 2e-11 ref|XP_004147772.1| PREDICTED: ATPase WRNIP1-like [Cucumis sativus] 70 1e-10 ref|NP_173839.1| AAA-type ATPase-like protein [Arabidopsis thali... 67 1e-09 >ref|XP_002264062.1| PREDICTED: ATPase WRNIP1-like [Vitis vinifera] Length = 534 Score = 77.0 bits (188), Expect = 1e-12 Identities = 51/129 (39%), Positives = 71/129 (55%), Gaps = 23/129 (17%) Frame = -3 Query: 320 MEIEQFIVNMGYSKELATEALAATGGNSTIKASEWIXXXXXXXXXXXXXL---------- 171 ME EQ +++MG+ +LA++ALAATGG S +KA+EWI Sbjct: 1 MEREQ-LLSMGFPDDLASQALAATGGKSILKATEWILGRNKSDSQTPDENPNSSPSPSPF 59 Query: 170 ----NRFF--QSKPHSPQTQQSQ----VGLSAEPKRQKLLQG---PHETLSERMRPRNID 30 +RFF QSKP +P Q Q L + P ++ L+ PH+ LSERMRPR +D Sbjct: 60 QPKLDRFFHFQSKPSNPPQIQKQHCDTPSLPSPPSKRLRLEAENSPHQPLSERMRPRTVD 119 Query: 29 EVVGQDHIV 3 +VVGQDH++ Sbjct: 120 DVVGQDHLL 128 >ref|XP_003618090.1| ATPase WRNIP1 [Medicago truncatula] gi|355519425|gb|AET01049.1| ATPase WRNIP1 [Medicago truncatula] Length = 551 Score = 73.6 bits (179), Expect = 2e-11 Identities = 52/136 (38%), Positives = 68/136 (50%), Gaps = 30/136 (22%) Frame = -3 Query: 320 MEIEQFIVNMGYSKELATEALAATGGNSTIKASEWI-----------XXXXXXXXXXXXX 174 ME++Q +++MG+ ELA +ALAATGG ST+KA+EWI Sbjct: 1 MEMQQ-LLSMGFPDELAAQALAATGGKSTVKATEWILTHKPPNSTIHTPSSSPSSAFQPK 59 Query: 173 LNRFFQSKPHSPQTQQSQVGLSAEPKRQKL-----------------LQGP--HETLSER 51 L+RFFQ+ Q +Q Q KR KL Q P HE L ER Sbjct: 60 LDRFFQTPQQPIQAEQQQQQTEEPNKRTKLSPTQQNKPSFFFKPTSMKQQPQTHEPLYER 119 Query: 50 MRPRNIDEVVGQDHIV 3 +RPR +DEVVGQDH++ Sbjct: 120 LRPRTLDEVVGQDHLL 135 >ref|XP_003545063.1| PREDICTED: ATPase WRNIP1-like [Glycine max] Length = 533 Score = 73.2 bits (178), Expect = 2e-11 Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 18/120 (15%) Frame = -3 Query: 308 QFIVNMGYSKELATEALAATGGNSTIKASEWIXXXXXXXXXXXXXLNRFF--QSKPHSPQ 135 Q +++MG+ ELA +ALAATGG ST+KA+EWI L+RFF QS+ H Sbjct: 2 QQLLSMGFPDELAAQALAATGGKSTVKATEWILSHKPNSSTFQPKLDRFFHSQSQEHDEP 61 Query: 134 TQQSQVGLSAEPKRQKLLQGP----------------HETLSERMRPRNIDEVVGQDHIV 3 +++ + S P + P HE L ER+RPR +D+VVGQ+H++ Sbjct: 62 SKRPKPSPSPSPSPAQPQHWPSFFFKIADKKHANTHIHEPLYERLRPRTLDDVVGQEHLL 121 >ref|XP_004147772.1| PREDICTED: ATPase WRNIP1-like [Cucumis sativus] Length = 513 Score = 70.5 bits (171), Expect = 1e-10 Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 8/108 (7%) Frame = -3 Query: 302 IVNMGYSKELATEALAATGGNSTIKASEWIXXXXXXXXXXXXXLNRFFQSKPHSPQTQQS 123 +VNMG+ ELA +ALAATGG ST+KA+EWI K SP + + Sbjct: 4 LVNMGFPDELAAQALAATGGKSTLKATEWI-----------------LNHKSSSP-SPKP 45 Query: 122 QVGLSAEPKRQKLL--------QGPHETLSERMRPRNIDEVVGQDHIV 3 + +S+ P Q L + P + SERMRPR ID+VVGQDH++ Sbjct: 46 NLPISSNPNLQPKLDRFFHFQPRPPPPSASERMRPRTIDDVVGQDHLL 93 >ref|NP_173839.1| AAA-type ATPase-like protein [Arabidopsis thaliana] gi|2829884|gb|AAC00592.1| Hypothetical protein [Arabidopsis thaliana] gi|332192391|gb|AEE30512.1| AAA-type ATPase-like protein [Arabidopsis thaliana] Length = 525 Score = 67.4 bits (163), Expect = 1e-09 Identities = 47/120 (39%), Positives = 63/120 (52%), Gaps = 20/120 (16%) Frame = -3 Query: 302 IVNMGYSKELATEALAATGGNSTIKASEWI---XXXXXXXXXXXXXLNRFFQ-------- 156 +V+MG+S +LA EAL ATGG+S KA++WI L+RF + Sbjct: 4 LVSMGFSSDLAAEALTATGGDSIQKATDWILSHRSSPQSTATLQPKLDRFLRLHPKALAP 63 Query: 155 ------SKPHSPQTQQSQVGLSAEPKRQKLLQG---PHETLSERMRPRNIDEVVGQDHIV 3 SK +P+T Q V KR KL H+ LSERMRPR +D+VVGQDH++ Sbjct: 64 AMGDDSSKRPNPKT-QIHVAADDSNKRHKLSSSSHRQHQPLSERMRPRTLDDVVGQDHLL 122