BLASTX nr result

ID: Coptis25_contig00022953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022953
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264062.1| PREDICTED: ATPase WRNIP1-like [Vitis vinifera]     77   1e-12
ref|XP_003618090.1| ATPase WRNIP1 [Medicago truncatula] gi|35551...    74   2e-11
ref|XP_003545063.1| PREDICTED: ATPase WRNIP1-like [Glycine max]        73   2e-11
ref|XP_004147772.1| PREDICTED: ATPase WRNIP1-like [Cucumis sativus]    70   1e-10
ref|NP_173839.1| AAA-type ATPase-like protein [Arabidopsis thali...    67   1e-09

>ref|XP_002264062.1| PREDICTED: ATPase WRNIP1-like [Vitis vinifera]
          Length = 534

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 51/129 (39%), Positives = 71/129 (55%), Gaps = 23/129 (17%)
 Frame = -3

Query: 320 MEIEQFIVNMGYSKELATEALAATGGNSTIKASEWIXXXXXXXXXXXXXL---------- 171
           ME EQ +++MG+  +LA++ALAATGG S +KA+EWI                        
Sbjct: 1   MEREQ-LLSMGFPDDLASQALAATGGKSILKATEWILGRNKSDSQTPDENPNSSPSPSPF 59

Query: 170 ----NRFF--QSKPHSPQTQQSQ----VGLSAEPKRQKLLQG---PHETLSERMRPRNID 30
               +RFF  QSKP +P   Q Q      L + P ++  L+    PH+ LSERMRPR +D
Sbjct: 60  QPKLDRFFHFQSKPSNPPQIQKQHCDTPSLPSPPSKRLRLEAENSPHQPLSERMRPRTVD 119

Query: 29  EVVGQDHIV 3
           +VVGQDH++
Sbjct: 120 DVVGQDHLL 128


>ref|XP_003618090.1| ATPase WRNIP1 [Medicago truncatula] gi|355519425|gb|AET01049.1|
           ATPase WRNIP1 [Medicago truncatula]
          Length = 551

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 52/136 (38%), Positives = 68/136 (50%), Gaps = 30/136 (22%)
 Frame = -3

Query: 320 MEIEQFIVNMGYSKELATEALAATGGNSTIKASEWI-----------XXXXXXXXXXXXX 174
           ME++Q +++MG+  ELA +ALAATGG ST+KA+EWI                        
Sbjct: 1   MEMQQ-LLSMGFPDELAAQALAATGGKSTVKATEWILTHKPPNSTIHTPSSSPSSAFQPK 59

Query: 173 LNRFFQSKPHSPQTQQSQVGLSAEPKRQKL-----------------LQGP--HETLSER 51
           L+RFFQ+     Q +Q Q       KR KL                  Q P  HE L ER
Sbjct: 60  LDRFFQTPQQPIQAEQQQQQTEEPNKRTKLSPTQQNKPSFFFKPTSMKQQPQTHEPLYER 119

Query: 50  MRPRNIDEVVGQDHIV 3
           +RPR +DEVVGQDH++
Sbjct: 120 LRPRTLDEVVGQDHLL 135


>ref|XP_003545063.1| PREDICTED: ATPase WRNIP1-like [Glycine max]
          Length = 533

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 18/120 (15%)
 Frame = -3

Query: 308 QFIVNMGYSKELATEALAATGGNSTIKASEWIXXXXXXXXXXXXXLNRFF--QSKPHSPQ 135
           Q +++MG+  ELA +ALAATGG ST+KA+EWI             L+RFF  QS+ H   
Sbjct: 2   QQLLSMGFPDELAAQALAATGGKSTVKATEWILSHKPNSSTFQPKLDRFFHSQSQEHDEP 61

Query: 134 TQQSQVGLSAEPKRQKLLQGP----------------HETLSERMRPRNIDEVVGQDHIV 3
           +++ +   S  P   +    P                HE L ER+RPR +D+VVGQ+H++
Sbjct: 62  SKRPKPSPSPSPSPAQPQHWPSFFFKIADKKHANTHIHEPLYERLRPRTLDDVVGQEHLL 121


>ref|XP_004147772.1| PREDICTED: ATPase WRNIP1-like [Cucumis sativus]
          Length = 513

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
 Frame = -3

Query: 302 IVNMGYSKELATEALAATGGNSTIKASEWIXXXXXXXXXXXXXLNRFFQSKPHSPQTQQS 123
           +VNMG+  ELA +ALAATGG ST+KA+EWI                    K  SP + + 
Sbjct: 4   LVNMGFPDELAAQALAATGGKSTLKATEWI-----------------LNHKSSSP-SPKP 45

Query: 122 QVGLSAEPKRQKLL--------QGPHETLSERMRPRNIDEVVGQDHIV 3
            + +S+ P  Q  L        + P  + SERMRPR ID+VVGQDH++
Sbjct: 46  NLPISSNPNLQPKLDRFFHFQPRPPPPSASERMRPRTIDDVVGQDHLL 93


>ref|NP_173839.1| AAA-type ATPase-like protein [Arabidopsis thaliana]
           gi|2829884|gb|AAC00592.1| Hypothetical protein
           [Arabidopsis thaliana] gi|332192391|gb|AEE30512.1|
           AAA-type ATPase-like protein [Arabidopsis thaliana]
          Length = 525

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 47/120 (39%), Positives = 63/120 (52%), Gaps = 20/120 (16%)
 Frame = -3

Query: 302 IVNMGYSKELATEALAATGGNSTIKASEWI---XXXXXXXXXXXXXLNRFFQ-------- 156
           +V+MG+S +LA EAL ATGG+S  KA++WI                L+RF +        
Sbjct: 4   LVSMGFSSDLAAEALTATGGDSIQKATDWILSHRSSPQSTATLQPKLDRFLRLHPKALAP 63

Query: 155 ------SKPHSPQTQQSQVGLSAEPKRQKLLQG---PHETLSERMRPRNIDEVVGQDHIV 3
                 SK  +P+T Q  V      KR KL       H+ LSERMRPR +D+VVGQDH++
Sbjct: 64  AMGDDSSKRPNPKT-QIHVAADDSNKRHKLSSSSHRQHQPLSERMRPRTLDDVVGQDHLL 122


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