BLASTX nr result

ID: Coptis25_contig00022950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022950
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275329.2| PREDICTED: uncharacterized protein LOC100250...   214   4e-54
emb|CAN75924.1| hypothetical protein VITISV_029516 [Vitis vinife...   214   4e-54
ref|XP_002327767.1| predicted protein [Populus trichocarpa] gi|2...   214   8e-54
ref|XP_002512997.1| ATP binding protein, putative [Ricinus commu...   211   5e-53
ref|XP_002280678.2| PREDICTED: uncharacterized protein LOC100257...   210   8e-53

>ref|XP_002275329.2| PREDICTED: uncharacterized protein LOC100250389 [Vitis vinifera]
          Length = 957

 Score =  214 bits (546), Expect = 4e-54
 Identities = 104/136 (76%), Positives = 121/136 (88%)
 Frame = +2

Query: 2   NTLIYRNTLSERSMNPHGYTFDRVFGSDSPTKTVYDEAAKEVALSVVSGINASIFAYGQT 181
           NT+++RN+L ERSM P  Y+FD+VF  D  T+ VY+EAAKE+ALSVV+GIN+SIFAYGQT
Sbjct: 53  NTVLFRNSLQERSMFPTAYSFDKVFRGDCTTRQVYEEAAKEIALSVVNGINSSIFAYGQT 112

Query: 182 SSGKTFTMSGITEYTVEDIYDYVQRHVERTFVLKFSAMEIYNEAVRDLLSTDHTPLRLLD 361
           SSGKT+TM GITEYTV DIYDY+Q H ER FVLKFSAMEIYNEAVRDLLSTD+ PLRLLD
Sbjct: 113 SSGKTYTMIGITEYTVADIYDYIQNHEERAFVLKFSAMEIYNEAVRDLLSTDNLPLRLLD 172

Query: 362 DPERGTVVDRLTEETL 409
           DPERGT+V++LTEETL
Sbjct: 173 DPERGTIVEKLTEETL 188


>emb|CAN75924.1| hypothetical protein VITISV_029516 [Vitis vinifera]
           gi|297744725|emb|CBI37987.3| unnamed protein product
           [Vitis vinifera]
          Length = 969

 Score =  214 bits (546), Expect = 4e-54
 Identities = 104/136 (76%), Positives = 121/136 (88%)
 Frame = +2

Query: 2   NTLIYRNTLSERSMNPHGYTFDRVFGSDSPTKTVYDEAAKEVALSVVSGINASIFAYGQT 181
           NT+++RN+L ERSM P  Y+FD+VF  D  T+ VY+EAAKE+ALSVV+GIN+SIFAYGQT
Sbjct: 53  NTVLFRNSLQERSMFPTAYSFDKVFRGDCTTRQVYEEAAKEIALSVVNGINSSIFAYGQT 112

Query: 182 SSGKTFTMSGITEYTVEDIYDYVQRHVERTFVLKFSAMEIYNEAVRDLLSTDHTPLRLLD 361
           SSGKT+TM GITEYTV DIYDY+Q H ER FVLKFSAMEIYNEAVRDLLSTD+ PLRLLD
Sbjct: 113 SSGKTYTMIGITEYTVADIYDYIQNHEERAFVLKFSAMEIYNEAVRDLLSTDNLPLRLLD 172

Query: 362 DPERGTVVDRLTEETL 409
           DPERGT+V++LTEETL
Sbjct: 173 DPERGTIVEKLTEETL 188


>ref|XP_002327767.1| predicted protein [Populus trichocarpa] gi|222836852|gb|EEE75245.1|
           predicted protein [Populus trichocarpa]
          Length = 910

 Score =  214 bits (544), Expect = 8e-54
 Identities = 108/138 (78%), Positives = 120/138 (86%), Gaps = 2/138 (1%)
 Frame = +2

Query: 2   NTLIYRNTL--SERSMNPHGYTFDRVFGSDSPTKTVYDEAAKEVALSVVSGINASIFAYG 175
           +T+IYRN L  SERSM P  YTFDRVFGSD  TK VY E AKEVALSVVSGIN+S+FAYG
Sbjct: 40  DTVIYRNNLPVSERSMYPTAYTFDRVFGSDCSTKHVYGEGAKEVALSVVSGINSSVFAYG 99

Query: 176 QTSSGKTFTMSGITEYTVEDIYDYVQRHVERTFVLKFSAMEIYNEAVRDLLSTDHTPLRL 355
           QTSSGKT+TMSGITEYT+ DIYDYV++H ER F LKFSAMEIYNE+VRDLL  D TPLRL
Sbjct: 100 QTSSGKTYTMSGITEYTIADIYDYVEKHKEREFTLKFSAMEIYNESVRDLLGADATPLRL 159

Query: 356 LDDPERGTVVDRLTEETL 409
           LDDPERGTVV+RLTEE++
Sbjct: 160 LDDPERGTVVERLTEESI 177


>ref|XP_002512997.1| ATP binding protein, putative [Ricinus communis]
           gi|223548008|gb|EEF49500.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 842

 Score =  211 bits (537), Expect = 5e-53
 Identities = 104/135 (77%), Positives = 117/135 (86%)
 Frame = +2

Query: 5   TLIYRNTLSERSMNPHGYTFDRVFGSDSPTKTVYDEAAKEVALSVVSGINASIFAYGQTS 184
           T++YRNTL E S  P  YTFDRVF  DS T+ VYDE AKEVALSVVSGIN+SIFAYGQTS
Sbjct: 54  TILYRNTLREGSTFPSAYTFDRVFRGDSSTRQVYDEGAKEVALSVVSGINSSIFAYGQTS 113

Query: 185 SGKTFTMSGITEYTVEDIYDYVQRHVERTFVLKFSAMEIYNEAVRDLLSTDHTPLRLLDD 364
           SGKT+TM GITEYTV DI+DY+ RH ER FVLKFSA+EIYNEA+RDLLS D TPLRLLDD
Sbjct: 114 SGKTYTMIGITEYTVADIFDYIHRHEERAFVLKFSAIEIYNEAIRDLLSADSTPLRLLDD 173

Query: 365 PERGTVVDRLTEETL 409
           PE+GTVV+++TEETL
Sbjct: 174 PEKGTVVEKVTEETL 188


>ref|XP_002280678.2| PREDICTED: uncharacterized protein LOC100257491 [Vitis vinifera]
          Length = 937

 Score =  210 bits (535), Expect = 8e-53
 Identities = 106/138 (76%), Positives = 120/138 (86%), Gaps = 2/138 (1%)
 Frame = +2

Query: 2   NTLIYRNTLS--ERSMNPHGYTFDRVFGSDSPTKTVYDEAAKEVALSVVSGINASIFAYG 175
           NT+IY+N+LS  ERS  P  YTFDRVFG +  T+ VYDE AKEVALSVV+GIN+SIFAYG
Sbjct: 49  NTIIYKNSLSLPERSQFPTAYTFDRVFGQNCSTREVYDEGAKEVALSVVNGINSSIFAYG 108

Query: 176 QTSSGKTFTMSGITEYTVEDIYDYVQRHVERTFVLKFSAMEIYNEAVRDLLSTDHTPLRL 355
           QTSSGKT+TM+GITEY V DIYDYV+RH +R F LKFSAMEIYNEA+RDLLS+D  PLRL
Sbjct: 109 QTSSGKTYTMTGITEYAVSDIYDYVERHRDREFKLKFSAMEIYNEALRDLLSSDSAPLRL 168

Query: 356 LDDPERGTVVDRLTEETL 409
           LDDPERGTVVD+LTEETL
Sbjct: 169 LDDPERGTVVDKLTEETL 186


Top