BLASTX nr result

ID: Coptis25_contig00022946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022946
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24654.1| unknown [Picea sitchensis]                              94   1e-17
ref|XP_002319510.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
ref|XP_002334877.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
gb|ABK94308.1| unknown [Populus trichocarpa]                           92   3e-17
gb|ABK92957.1| unknown [Populus trichocarpa]                           92   3e-17

>gb|ABK24654.1| unknown [Picea sitchensis]
          Length = 131

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 46/61 (75%), Positives = 55/61 (90%), Gaps = 4/61 (6%)
 Frame = +1

Query: 112 ATFVIDCGKPVEDKIMDIASLEKFLQERIKV----GALGDVVSIARHRNKISVTSDTNFS 279
           +TFVIDCGKPVEDKIMDIAS EKFLQ+RIKV    G LGD+V+I+RH+NKISVTS+++FS
Sbjct: 23  STFVIDCGKPVEDKIMDIASFEKFLQDRIKVGGKTGVLGDIVTISRHKNKISVTSESSFS 82

Query: 280 K 282
           K
Sbjct: 83  K 83


>ref|XP_002319510.1| predicted protein [Populus trichocarpa] gi|222857886|gb|EEE95433.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/61 (77%), Positives = 52/61 (85%), Gaps = 4/61 (6%)
 Frame = +1

Query: 112 ATFVIDCGKPVEDKIMDIASLEKFLQERIKV----GALGDVVSIARHRNKISVTSDTNFS 279
           ATF IDC KPVEDKIMDIASLEKFLQERIKV    GALGD V++ R +NKI+VTSD+NFS
Sbjct: 9   ATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVTVTREKNKITVTSDSNFS 68

Query: 280 K 282
           K
Sbjct: 69  K 69


>ref|XP_002334877.1| predicted protein [Populus trichocarpa] gi|222831911|gb|EEE70388.1|
           predicted protein [Populus trichocarpa]
          Length = 70

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/61 (77%), Positives = 52/61 (85%), Gaps = 4/61 (6%)
 Frame = +1

Query: 112 ATFVIDCGKPVEDKIMDIASLEKFLQERIKV----GALGDVVSIARHRNKISVTSDTNFS 279
           ATF IDC KPVEDKIMDIASLEKFLQERIKV    GALGD V++ R +NKI+VTSD+NFS
Sbjct: 9   ATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVTREKNKITVTSDSNFS 68

Query: 280 K 282
           K
Sbjct: 69  K 69


>gb|ABK94308.1| unknown [Populus trichocarpa]
          Length = 124

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/61 (77%), Positives = 52/61 (85%), Gaps = 4/61 (6%)
 Frame = +1

Query: 112 ATFVIDCGKPVEDKIMDIASLEKFLQERIKV----GALGDVVSIARHRNKISVTSDTNFS 279
           ATF IDC KPVEDKIMDIASLEKFLQERIKV    GALGD V++ R +NKI+VTSD+NFS
Sbjct: 16  ATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVTVTREKNKITVTSDSNFS 75

Query: 280 K 282
           K
Sbjct: 76  K 76


>gb|ABK92957.1| unknown [Populus trichocarpa]
          Length = 124

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/61 (77%), Positives = 52/61 (85%), Gaps = 4/61 (6%)
 Frame = +1

Query: 112 ATFVIDCGKPVEDKIMDIASLEKFLQERIKV----GALGDVVSIARHRNKISVTSDTNFS 279
           ATF IDC KPVEDKIMDIASLEKFLQERIKV    GALGD V++ R +NKI+VTSD+NFS
Sbjct: 16  ATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVTREKNKITVTSDSNFS 75

Query: 280 K 282
           K
Sbjct: 76  K 76


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