BLASTX nr result

ID: Coptis25_contig00022941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022941
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002885714.1| hypothetical protein ARALYDRAFT_319227 [Arab...   110   2e-27
ref|XP_002883617.1| hypothetical protein ARALYDRAFT_342735 [Arab...   110   2e-27
ref|XP_003569739.1| PREDICTED: valyl-tRNA synthetase-like [Brach...   110   5e-27
gb|EEE59740.1| hypothetical protein OsJ_12199 [Oryza sativa Japo...   110   7e-27
gb|EEC75995.1| hypothetical protein OsI_13120 [Oryza sativa Indi...   110   7e-27

>ref|XP_002885714.1| hypothetical protein ARALYDRAFT_319227 [Arabidopsis lyrata subsp.
           lyrata] gi|297331554|gb|EFH61973.1| hypothetical protein
           ARALYDRAFT_319227 [Arabidopsis lyrata subsp. lyrata]
          Length = 1036

 Score =  110 bits (275), Expect(2) = 2e-27
 Identities = 49/66 (74%), Positives = 57/66 (86%)
 Frame = -3

Query: 198 NPSHVEKSWYDWWDKSGFFVPDAASSLKPSFVVVLPPPNVTGALHIGHALTTAIQDTIVR 19
           +PS VEKSWY+WW+ S FF  DA SS KP FV+VLPPPNVTGALHIGHALT A+QDT++R
Sbjct: 78  SPSAVEKSWYEWWETSEFFKADATSS-KPQFVIVLPPPNVTGALHIGHALTCAVQDTLIR 136

Query: 18  WRRMSG 1
           W+RMSG
Sbjct: 137 WKRMSG 142



 Score = 37.0 bits (84), Expect(2) = 2e-27
 Identities = 14/25 (56%), Positives = 21/25 (84%)
 Frame = -2

Query: 268 DFLDPQTPLGEKKQLSTKMERQY*P 194
           DF DP+TP+GE+K+LS++M + Y P
Sbjct: 55  DFSDPETPIGERKRLSSQMAKHYSP 79


>ref|XP_002883617.1| hypothetical protein ARALYDRAFT_342735 [Arabidopsis lyrata subsp.
           lyrata] gi|297329457|gb|EFH59876.1| hypothetical protein
           ARALYDRAFT_342735 [Arabidopsis lyrata subsp. lyrata]
          Length = 916

 Score =  110 bits (275), Expect(2) = 2e-27
 Identities = 49/66 (74%), Positives = 57/66 (86%)
 Frame = -3

Query: 198 NPSHVEKSWYDWWDKSGFFVPDAASSLKPSFVVVLPPPNVTGALHIGHALTTAIQDTIVR 19
           +PS VEKSWY+WW+ S FF  DA SS KP FV+VLPPPNVTGALHIGHALT A+QDT++R
Sbjct: 78  SPSAVEKSWYEWWETSEFFKADATSS-KPQFVIVLPPPNVTGALHIGHALTCAVQDTLIR 136

Query: 18  WRRMSG 1
           W+RMSG
Sbjct: 137 WKRMSG 142



 Score = 37.0 bits (84), Expect(2) = 2e-27
 Identities = 14/25 (56%), Positives = 21/25 (84%)
 Frame = -2

Query: 268 DFLDPQTPLGEKKQLSTKMERQY*P 194
           DF DP+TP+GE+K+LS++M + Y P
Sbjct: 55  DFSDPETPIGERKRLSSQMAKHYSP 79


>ref|XP_003569739.1| PREDICTED: valyl-tRNA synthetase-like [Brachypodium distachyon]
          Length = 1043

 Score =  110 bits (274), Expect(2) = 5e-27
 Identities = 51/66 (77%), Positives = 56/66 (84%)
 Frame = -3

Query: 198 NPSHVEKSWYDWWDKSGFFVPDAASSLKPSFVVVLPPPNVTGALHIGHALTTAIQDTIVR 19
           NPS VEKSWY WW+ SG F  D ASS KP FV+VLPPPNVTGALHIGHALT AI+DT++R
Sbjct: 86  NPSAVEKSWYAWWESSGNFGADPASS-KPPFVIVLPPPNVTGALHIGHALTVAIEDTMIR 144

Query: 18  WRRMSG 1
           WRRMSG
Sbjct: 145 WRRMSG 150



 Score = 35.8 bits (81), Expect(2) = 5e-27
 Identities = 15/25 (60%), Positives = 19/25 (76%)
 Frame = -2

Query: 268 DFLDPQTPLGEKKQLSTKMERQY*P 194
           DF+DP TP GEKK L+ +M +QY P
Sbjct: 63  DFIDPDTPSGEKKLLAHQMAKQYNP 87


>gb|EEE59740.1| hypothetical protein OsJ_12199 [Oryza sativa Japonica Group]
          Length = 1061

 Score =  110 bits (275), Expect(2) = 7e-27
 Identities = 49/66 (74%), Positives = 58/66 (87%)
 Frame = -3

Query: 198 NPSHVEKSWYDWWDKSGFFVPDAASSLKPSFVVVLPPPNVTGALHIGHALTTAIQDTIVR 19
           +P+ VEKSWY WW+ SG+F  DAASS KP FV+VLPPPNVTGALHIGHALT AI+D+++R
Sbjct: 97  SPTAVEKSWYSWWESSGYFGADAASS-KPPFVIVLPPPNVTGALHIGHALTVAIEDSMIR 155

Query: 18  WRRMSG 1
           WRRMSG
Sbjct: 156 WRRMSG 161



 Score = 35.0 bits (79), Expect(2) = 7e-27
 Identities = 14/25 (56%), Positives = 20/25 (80%)
 Frame = -2

Query: 268 DFLDPQTPLGEKKQLSTKMERQY*P 194
           DF+DP TP G+KK L+++M +QY P
Sbjct: 74  DFIDPDTPHGQKKFLASQMAKQYSP 98


>gb|EEC75995.1| hypothetical protein OsI_13120 [Oryza sativa Indica Group]
          Length = 1061

 Score =  110 bits (275), Expect(2) = 7e-27
 Identities = 49/66 (74%), Positives = 58/66 (87%)
 Frame = -3

Query: 198 NPSHVEKSWYDWWDKSGFFVPDAASSLKPSFVVVLPPPNVTGALHIGHALTTAIQDTIVR 19
           +P+ VEKSWY WW+ SG+F  DAASS KP FV+VLPPPNVTGALHIGHALT AI+D+++R
Sbjct: 97  SPTAVEKSWYSWWESSGYFGADAASS-KPPFVIVLPPPNVTGALHIGHALTVAIEDSMIR 155

Query: 18  WRRMSG 1
           WRRMSG
Sbjct: 156 WRRMSG 161



 Score = 35.0 bits (79), Expect(2) = 7e-27
 Identities = 14/25 (56%), Positives = 20/25 (80%)
 Frame = -2

Query: 268 DFLDPQTPLGEKKQLSTKMERQY*P 194
           DF+DP TP G+KK L+++M +QY P
Sbjct: 74  DFIDPDTPHGQKKFLASQMAKQYSP 98


Top