BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022934
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277241.1| PREDICTED: ribonuclease Z, chloroplastic [Vi...   150   1e-34
ref|NP_178532.2| Ribonuclease Z [Arabidopsis thaliana] gi|410177...   148   5e-34
gb|AAD25827.1| hypothetical protein [Arabidopsis thaliana]            148   5e-34
ref|XP_002883646.1| hypothetical protein ARALYDRAFT_480092 [Arab...   145   3e-33
emb|CAD22099.1| RNase Z [Arabidopsis thaliana]                        144   6e-33

>ref|XP_002277241.1| PREDICTED: ribonuclease Z, chloroplastic [Vitis vinifera]
           gi|297739240|emb|CBI28891.3| unnamed protein product
           [Vitis vinifera]
          Length = 354

 Score =  150 bits (379), Expect = 1e-34
 Identities = 70/91 (76%), Positives = 80/91 (87%), Gaps = 1/91 (1%)
 Frame = -1

Query: 271 RGSGFLSAVDRVIEEEE-YRKYRAQTNRKGVDLEGYVIEGVSIGGHETCIVVPRLNAAFD 95
           +GSG+LS + R IEEEE YRK RA+  R GVDLEGY IEG+SIGGHETC+++P L +AFD
Sbjct: 46  KGSGYLSLIGRAIEEEEEYRKARAEVARNGVDLEGYSIEGISIGGHETCVIIPELKSAFD 105

Query: 94  IGRCPSRAIQQDFLFITHAHLDHIGGLPMYV 2
           IGRCPSRAIQQ+FLFITHAHLDHIGGLPMYV
Sbjct: 106 IGRCPSRAIQQNFLFITHAHLDHIGGLPMYV 136


>ref|NP_178532.2| Ribonuclease Z [Arabidopsis thaliana]
           gi|41017757|sp|Q8L633.1|RNZC_ARATH RecName:
           Full=Ribonuclease Z, chloroplastic; Short=RNase Z;
           AltName: Full=Zinc phosphodiesterase CPZ; AltName:
           Full=tRNA 3 endonuclease; AltName: Full=tRNase Z; Flags:
           Precursor gi|20466197|gb|AAM20416.1| unknown protein
           [Arabidopsis thaliana] gi|24899839|gb|AAN65134.1|
           unknown protein [Arabidopsis thaliana]
           gi|330250749|gb|AEC05843.1| Ribonuclease Z [Arabidopsis
           thaliana]
          Length = 354

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/102 (67%), Positives = 82/102 (80%), Gaps = 1/102 (0%)
 Frame = -1

Query: 304 RSIKNHTLYALRGSGFLSAVDRVIEEEE-YRKYRAQTNRKGVDLEGYVIEGVSIGGHETC 128
           +S + H +  ++ SG+ S++ R IEEEE YRK RA  NRKGV+LE Y IEG+S+GGHETC
Sbjct: 35  QSNRRHFVSPVKVSGYFSSISRAIEEEEEYRKARAAVNRKGVELESYAIEGISVGGHETC 94

Query: 127 IVVPRLNAAFDIGRCPSRAIQQDFLFITHAHLDHIGGLPMYV 2
           ++VP L   FDIGRCPSRAIQQ FLFITHAHLDHIGGLPMYV
Sbjct: 95  VIVPELKCVFDIGRCPSRAIQQKFLFITHAHLDHIGGLPMYV 136


>gb|AAD25827.1| hypothetical protein [Arabidopsis thaliana]
          Length = 356

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/102 (67%), Positives = 82/102 (80%), Gaps = 1/102 (0%)
 Frame = -1

Query: 304 RSIKNHTLYALRGSGFLSAVDRVIEEEE-YRKYRAQTNRKGVDLEGYVIEGVSIGGHETC 128
           +S + H +  ++ SG+ S++ R IEEEE YRK RA  NRKGV+LE Y IEG+S+GGHETC
Sbjct: 35  QSNRRHFVSPVKVSGYFSSISRAIEEEEEYRKARAAVNRKGVELESYAIEGISVGGHETC 94

Query: 127 IVVPRLNAAFDIGRCPSRAIQQDFLFITHAHLDHIGGLPMYV 2
           ++VP L   FDIGRCPSRAIQQ FLFITHAHLDHIGGLPMYV
Sbjct: 95  VIVPELKCVFDIGRCPSRAIQQKFLFITHAHLDHIGGLPMYV 136


>ref|XP_002883646.1| hypothetical protein ARALYDRAFT_480092 [Arabidopsis lyrata subsp.
           lyrata] gi|297329486|gb|EFH59905.1| hypothetical protein
           ARALYDRAFT_480092 [Arabidopsis lyrata subsp. lyrata]
          Length = 353

 Score =  145 bits (367), Expect = 3e-33
 Identities = 68/102 (66%), Positives = 83/102 (81%), Gaps = 1/102 (0%)
 Frame = -1

Query: 304 RSIKNHTLYALRGSGFLSAVDRVIEEEE-YRKYRAQTNRKGVDLEGYVIEGVSIGGHETC 128
           +S +++ +  ++ SG+ S++ R IEEEE YRK RA  NRKGV+LE Y IEG+S+GGHETC
Sbjct: 34  QSHRSNFVSPVKVSGYFSSISRAIEEEEEYRKARAAVNRKGVELESYAIEGISVGGHETC 93

Query: 127 IVVPRLNAAFDIGRCPSRAIQQDFLFITHAHLDHIGGLPMYV 2
           ++VP L   FDIGRCPSRAIQQ FLFITHAHLDHIGGLPMYV
Sbjct: 94  VIVPELKCVFDIGRCPSRAIQQKFLFITHAHLDHIGGLPMYV 135


>emb|CAD22099.1| RNase Z [Arabidopsis thaliana]
          Length = 354

 Score =  144 bits (364), Expect = 6e-33
 Identities = 68/102 (66%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
 Frame = -1

Query: 304 RSIKNHTLYALRGSGFLSAVDRVIEEEE-YRKYRAQTNRKGVDLEGYVIEGVSIGGHETC 128
           +S + H +  ++ SG+ S++ R IEEEE YRK RA  NRKGV+LE Y IEG+S+GGHETC
Sbjct: 35  QSNRRHFVSPVKVSGYFSSISRAIEEEEEYRKARAAVNRKGVELESYAIEGISVGGHETC 94

Query: 127 IVVPRLNAAFDIGRCPSRAIQQDFLFITHAHLDHIGGLPMYV 2
           ++VP L   FDI RCPSRAIQQ FLFITHAHLDHIGGLPMYV
Sbjct: 95  VIVPELKCVFDIVRCPSRAIQQKFLFITHAHLDHIGGLPMYV 136