BLASTX nr result

ID: Coptis25_contig00022932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022932
         (749 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512705.1| conserved hypothetical protein [Ricinus comm...   324   1e-86
emb|CAN82114.1| hypothetical protein VITISV_031339 [Vitis vinifera]   318   8e-85
ref|XP_002268850.1| PREDICTED: UPF0481 protein At3g47200-like [V...   318   1e-84
ref|XP_002304623.1| predicted protein [Populus trichocarpa] gi|2...   297   2e-78
ref|XP_002449644.1| hypothetical protein SORBIDRAFT_05g020780 [S...   283   3e-74

>ref|XP_002512705.1| conserved hypothetical protein [Ricinus communis]
           gi|223548666|gb|EEF50157.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 470

 Score =  324 bits (831), Expect = 1e-86
 Identities = 166/247 (67%), Positives = 191/247 (77%), Gaps = 5/247 (2%)
 Frame = -2

Query: 739 TMGPCLHVLDVYRKSLLQDXXXXXXXXXXXXSLVHESTGDIIRSAVELHEAGIRFKTSKT 560
           ++G CLH LDVYRKSLLQ                 +   +IIRSA EL+EAGIRFK SKT
Sbjct: 211 SLGKCLHPLDVYRKSLLQKQVGREKRRILRSRR-QKGGNNIIRSATELNEAGIRFKKSKT 269

Query: 559 TSLRDISFRGGILSLPMIVVDDTTESTFLNLMAFERVHVGVGNDVTSYVFFMDNIIDSAK 380
            SL+DISFRGG+L LP+IVVDD TES FLNLMAFER HVG GN+VTS++FFMDNIIDS +
Sbjct: 270 RSLKDISFRGGVLRLPVIVVDDATESIFLNLMAFERFHVGAGNEVTSFIFFMDNIIDSER 329

Query: 379 DVSLLHAKEIIQNAIGSDKAVAKLFNSLSKDVTLDPESSLDKVHKKVNDYCKKKWNEWRA 200
           DV+LLH++ IIQNA+GSDKAVAKLFNSLSKD+TLDP SSLD VHKKVN YC+K WNEWRA
Sbjct: 330 DVALLHSRGIIQNAVGSDKAVAKLFNSLSKDITLDPNSSLDFVHKKVNAYCRKAWNEWRA 389

Query: 199 NLIHTYFRSPWAILSLVAAIFLVALTVLQTVYTIYPVYRKDSSP-PSESFILPHAP---- 35
           NLIHTYFR+PWAILSL+AA+FL ALT++QTVYTIYP+Y    SP P    + P  P    
Sbjct: 390 NLIHTYFRNPWAILSLIAAVFLFALTIVQTVYTIYPIYHSSESPSPPMVSVTPSPPIVSA 449

Query: 34  TPSPQ*P 14
            PSP  P
Sbjct: 450 APSPAAP 456


>emb|CAN82114.1| hypothetical protein VITISV_031339 [Vitis vinifera]
          Length = 449

 Score =  318 bits (815), Expect = 8e-85
 Identities = 165/241 (68%), Positives = 190/241 (78%), Gaps = 4/241 (1%)
 Frame = -2

Query: 736 MGPCLHVLDVYRKSLLQDXXXXXXXXXXXXSLVHESTGD-IIRSAVELHEAGIRFKTSKT 560
           MG CLHVLDVYRKSLLQ+            S      G+ IIRSA EL EAGIR K S+T
Sbjct: 209 MGKCLHVLDVYRKSLLQEGPGRKPRHYKTRSRADNERGEEIIRSATELDEAGIRMKKSRT 268

Query: 559 TSLRDISFRGGILSLPMIVVDDTTESTFLNLMAFERVHVGVGNDVTSYVFFMDNIIDSAK 380
            SL+DISF+GG+L LP+IVVDDTTES FLNL+AFER+HVG GN+VTS++FFMDNIID+AK
Sbjct: 269 QSLKDISFKGGVLKLPVIVVDDTTESMFLNLIAFERLHVGAGNEVTSFIFFMDNIIDNAK 328

Query: 379 DVSLLHAKEIIQNAIGSDKAVAKLFNSLSKDVTLDPESSLDKVHKKVNDYCKKKWNEWRA 200
           DV LLH++ IIQ+A+GSDKAVAKLFNSLSKD+TLDP+  L  VHKKVNDYC+K WNEWRA
Sbjct: 329 DVXLLHSRGIIQSALGSDKAVAKLFNSLSKDITLDPDGPLYGVHKKVNDYCRKSWNEWRA 388

Query: 199 NLIHTYFRSPWAILSLVAAIFLVALTVLQTVYTIYPVYR---KDSSPPSESFILPHAPTP 29
           NLIHTYFR+PWAILSL+AA FL ALT+ QTV+TIYP Y      SS PS+S  LP   TP
Sbjct: 389 NLIHTYFRNPWAILSLIAAAFLFALTIAQTVFTIYPYYHPSGDSSSSPSDS--LPPKRTP 446

Query: 28  S 26
           S
Sbjct: 447 S 447


>ref|XP_002268850.1| PREDICTED: UPF0481 protein At3g47200-like [Vitis vinifera]
          Length = 459

 Score =  318 bits (814), Expect = 1e-84
 Identities = 165/241 (68%), Positives = 190/241 (78%), Gaps = 4/241 (1%)
 Frame = -2

Query: 736 MGPCLHVLDVYRKSLLQDXXXXXXXXXXXXSLVHESTGD-IIRSAVELHEAGIRFKTSKT 560
           MG CLHVLDVYRKSLLQ+            S      G+ IIRSA EL EAGIR K S+T
Sbjct: 219 MGKCLHVLDVYRKSLLQEGPGRKPRHYKTRSRADNERGEEIIRSATELDEAGIRMKKSRT 278

Query: 559 TSLRDISFRGGILSLPMIVVDDTTESTFLNLMAFERVHVGVGNDVTSYVFFMDNIIDSAK 380
            SL+DISF+GG+L LP+IVVDDTTES FLNL+AFER+HVG GN+VTS++FFMDNIID+AK
Sbjct: 279 QSLKDISFKGGVLKLPVIVVDDTTESMFLNLIAFERLHVGAGNEVTSFIFFMDNIIDNAK 338

Query: 379 DVSLLHAKEIIQNAIGSDKAVAKLFNSLSKDVTLDPESSLDKVHKKVNDYCKKKWNEWRA 200
           DV LLH++ IIQ+A+GSDKAVAKLFNSLSKD+TLDP+  L  VHKKVNDYC+K WNEWRA
Sbjct: 339 DVILLHSRGIIQSALGSDKAVAKLFNSLSKDITLDPDGPLYGVHKKVNDYCRKSWNEWRA 398

Query: 199 NLIHTYFRSPWAILSLVAAIFLVALTVLQTVYTIYPVYR---KDSSPPSESFILPHAPTP 29
           NLIHTYFR+PWAILSL+AA FL ALT+ QTV+TIYP Y      SS PS+S  LP   TP
Sbjct: 399 NLIHTYFRNPWAILSLIAAAFLFALTIAQTVFTIYPYYHPSGDSSSSPSDS--LPPKRTP 456

Query: 28  S 26
           S
Sbjct: 457 S 457


>ref|XP_002304623.1| predicted protein [Populus trichocarpa] gi|222842055|gb|EEE79602.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score =  297 bits (760), Expect = 2e-78
 Identities = 145/215 (67%), Positives = 172/215 (80%)
 Frame = -2

Query: 736 MGPCLHVLDVYRKSLLQDXXXXXXXXXXXXSLVHESTGDIIRSAVELHEAGIRFKTSKTT 557
           +G CLHVLD+YRKSL+Q               +H+   DI+RSA E++EAGIRFK SKT 
Sbjct: 213 LGKCLHVLDLYRKSLIQKDPNRKRHQPRVRGGLHKDANDIVRSAAEINEAGIRFKKSKTK 272

Query: 556 SLRDISFRGGILSLPMIVVDDTTESTFLNLMAFERVHVGVGNDVTSYVFFMDNIIDSAKD 377
           SL+DISF  G+L LP +VVDD TE+  LNLMAFER HVG GN+VTSYVFFMDNIID+ +D
Sbjct: 273 SLKDISFHHGVLELPAVVVDDVTEALLLNLMAFERFHVGAGNEVTSYVFFMDNIIDNERD 332

Query: 376 VSLLHAKEIIQNAIGSDKAVAKLFNSLSKDVTLDPESSLDKVHKKVNDYCKKKWNEWRAN 197
           VSLLH++ IIQNAIGSDKAVAKLFNSLSKD+ LDP+SSL+ V ++VN YCKK WN WRAN
Sbjct: 333 VSLLHSRGIIQNAIGSDKAVAKLFNSLSKDIALDPDSSLELVQRQVNAYCKKPWNAWRAN 392

Query: 196 LIHTYFRSPWAILSLVAAIFLVALTVLQTVYTIYP 92
           LI TYFR+PWAILS+VAA+ L ALT++QTVYTI P
Sbjct: 393 LIQTYFRNPWAILSIVAALILFALTIVQTVYTILP 427


>ref|XP_002449644.1| hypothetical protein SORBIDRAFT_05g020780 [Sorghum bicolor]
           gi|241935487|gb|EES08632.1| hypothetical protein
           SORBIDRAFT_05g020780 [Sorghum bicolor]
          Length = 462

 Score =  283 bits (724), Expect = 3e-74
 Identities = 143/232 (61%), Positives = 176/232 (75%)
 Frame = -2

Query: 724 LHVLDVYRKSLLQDXXXXXXXXXXXXSLVHESTGDIIRSAVELHEAGIRFKTSKTTSLRD 545
           LH LDV R+S+L                +   T DI+RSAVEL+EAGIRFK + + SL +
Sbjct: 236 LHPLDVRRRSMLYGPKQPPQEVSRD---IAPETTDIMRSAVELYEAGIRFKKTSSDSLHN 292

Query: 544 ISFRGGILSLPMIVVDDTTESTFLNLMAFERVHVGVGNDVTSYVFFMDNIIDSAKDVSLL 365
           I FRGG+LS+P + VDD+TE  F+NLMAFER+HVG GNDVT+YVFFMDNIIDSAKDV+LL
Sbjct: 293 IRFRGGVLSMPAVSVDDSTEYMFMNLMAFERLHVGAGNDVTAYVFFMDNIIDSAKDVALL 352

Query: 364 HAKEIIQNAIGSDKAVAKLFNSLSKDVTLDPESSLDKVHKKVNDYCKKKWNEWRANLIHT 185
               IIQNA+GSDKAVA+LFNS+SKDV L+P+SSLD V ++VN YC K WN WRANLIHT
Sbjct: 353 STSGIIQNAVGSDKAVAQLFNSISKDVVLEPQSSLDAVQREVNAYCGKPWNLWRANLIHT 412

Query: 184 YFRSPWAILSLVAAIFLVALTVLQTVYTIYPVYRKDSSPPSESFILPHAPTP 29
           YFRSPWA +SL AA+FL+A+T++QTVYT+ P Y++D +  S S   P AP P
Sbjct: 413 YFRSPWAFMSLAAAVFLLAMTIMQTVYTVLPFYQQDQAGSSSS---PAAPAP 461


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