BLASTX nr result

ID: Coptis25_contig00022926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022926
         (1925 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265377.2| PREDICTED: zinc finger protein CONSTANS-LIKE...   442   e-121
ref|XP_002524598.1| transcription factor, putative [Ricinus comm...   439   e-120
ref|XP_003556888.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   413   e-113
ref|XP_002264506.2| PREDICTED: zinc finger protein CONSTANS-LIKE...   413   e-113
ref|XP_004139988.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   406   e-111

>ref|XP_002265377.2| PREDICTED: zinc finger protein CONSTANS-LIKE 10 [Vitis vinifera]
          Length = 414

 Score =  442 bits (1136), Expect = e-121
 Identities = 237/420 (56%), Positives = 292/420 (69%), Gaps = 4/420 (0%)
 Frame = -3

Query: 1791 MGQLCDYCGEQRAMVYCRSDAASLCLSCDRNVHSANALSRRHSRTLLCERCNTQPASVRC 1612
            MGQLCD+CG+QR+MVYCRSDAA LCLSCDRNVHSANALSRRHSRTLLCERCN+QPA+VRC
Sbjct: 1    MGQLCDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPATVRC 60

Query: 1611 VSDKMSLCQNCDWNEHCNSASSSTSHERQTINCYSGCPSAEELSRIWSFVLDTPSSDEYA 1432
            V +K+SLCQNC+W  H  S +S++ H+RQTINCYSGCPSA ELSRIWSFVL+  S D+  
Sbjct: 61   VEEKISLCQNCNWIGH-GSTTSASDHKRQTINCYSGCPSAAELSRIWSFVLEFLSVDDSN 119

Query: 1431 CEKRMGLMSIDENCVSNYSGCSDSNGNSTV-DPSFQGKSK-MENEDQFSIWAGSSSVAAG 1258
            CE+ M LMS+ EN V +   CS    N+ + D +  G++   EN D+  +W  SS V A 
Sbjct: 120  CEQGMVLMSLTENSVGS---CSLPPVNNNINDSTVAGRTNAQENVDKSDLWMASSPVPAL 176

Query: 1257 NSMHCSVNQLAG-SGDPTRKPSCLGPKGFEFGEEDFSNDFNLADVDINFENYEELFGMSQ 1081
            N +  SV+Q       PT K  C    G    ++    DF++ADVD++ ENYEELFG+SQ
Sbjct: 177  NPISSSVDQPTDLVNSPTTKLCC---SGICDDDDLLYEDFSMADVDLSIENYEELFGVSQ 233

Query: 1080 NHLEQDFEHNGIDNMFGLRHMSALDSGCEGGPYVEGSSAGKVKLMQAACSD-ASAESAMS 904
            NH EQ  E+ GID++FG+ ++   D+   G    EGSS   +K MQ ACS+  SA+S +S
Sbjct: 234  NHSEQLLENGGIDSLFGIGNLPGTDASARGAYVAEGSSVVHIKAMQPACSNPISADSIIS 293

Query: 903  AKTEPNFGYSTRQAHSSLSISFSGLTGDSNAGDYQDSGVSSMLLMDEPPWLPPGPESSYP 724
            +KT+PN  +  RQAHSSLS+SFSGLTG+S+ GDYQD GVSSMLLM EPPW  P PE+S P
Sbjct: 294  SKTDPNLCFPPRQAHSSLSLSFSGLTGESSTGDYQDCGVSSMLLMGEPPWCSPCPENSLP 353

Query: 723  SASRDSAVMRYXXXXXXXXXXXKIRYESXXXXXXXXXXXXXRFVKAGEAYDYDPMCQTRS 544
            SA+RDSAV+RY           KIRY S             RFVKAG+AYDYDP+ QTRS
Sbjct: 354  SANRDSAVLRYKEKKKARKFEKKIRYASRKARADVRKRVKGRFVKAGDAYDYDPLNQTRS 413


>ref|XP_002524598.1| transcription factor, putative [Ricinus communis]
            gi|223536151|gb|EEF37806.1| transcription factor,
            putative [Ricinus communis]
          Length = 414

 Score =  439 bits (1128), Expect = e-120
 Identities = 237/425 (55%), Positives = 289/425 (68%), Gaps = 8/425 (1%)
 Frame = -3

Query: 1791 MGQLCDYCGEQRAMVYCRSDAASLCLSCDRNVHSANALSRRHSRTLLCERCNTQPASVRC 1612
            MG +CD+CG+QR+MVYCRSDAA LCLSCDRNVHSANALSRRHSRTLLCERCN+QPA +RC
Sbjct: 1    MGYICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPALIRC 60

Query: 1611 VSDKMSLCQNCDWNEHCNSASSSTSHERQTINCYSGCPSAEELSRIWSFVLDTPSSD-EY 1435
              +++SLCQ CDW  H NS SSST H+RQTINCY+GCPSA ELS +WSFVLD PS D E 
Sbjct: 61   ADERLSLCQKCDWMVHGNSNSSST-HKRQTINCYTGCPSASELSSLWSFVLDFPSVDGES 119

Query: 1434 ACEKRMGLMSIDENCVSNYSGCSDSNGNSTVDPSFQGKSKMENEDQFSIWAGSSSVAAGN 1255
             CE+ +GLMSI E+  +N  G  D     T+  +  G + + N  +       SS   GN
Sbjct: 120  TCEQELGLMSIAEDSSTNTWGPPD----KTISQNVSGAAAVNNACEIP----KSSGCVGN 171

Query: 1254 S-----MHCSVNQLAGSGD-PTRKPSCLGPKGFEFGEEDFSNDFNLADVDINFENYEELF 1093
            S     M  +++  AGS + P  K  C G KG    E+D   DFN+ +VD+N ENYEELF
Sbjct: 172  SSAPQLMPNNLDHPAGSANAPLPKLCCPGTKGPALCEDDLYEDFNMDEVDLNLENYEELF 231

Query: 1092 GMSQNHLEQDFEHNGIDNMFGLRHMSALDSGCEGGPYVEGSSAGKVKLMQAACSD-ASAE 916
            G++ N  E+ FE+ GID++FG++ MSA DS C+G    EGSSAG V  +Q ACS+ ASA+
Sbjct: 232  GIALNDSEELFENGGIDSLFGMKDMSAADSNCQGAVAAEGSSAGLVNAVQPACSNAASAD 291

Query: 915  SAMSAKTEPNFGYSTRQAHSSLSISFSGLTGDSNAGDYQDSGVSSMLLMDEPPWLPPGPE 736
            S MSAKTEP   ++ R  HS+L  SFSGLTG+S+AGDYQD G SSM LM EPPW PP PE
Sbjct: 292  SMMSAKTEPILCFTARPGHSNL--SFSGLTGESSAGDYQDCGASSMFLMGEPPWCPPCPE 349

Query: 735  SSYPSASRDSAVMRYXXXXXXXXXXXKIRYESXXXXXXXXXXXXXRFVKAGEAYDYDPMC 556
            SS+ SA+R+ AVMRY           K+RY S             RFVKAG+AYDYDP+ 
Sbjct: 350  SSFSSANRNDAVMRYKEKKKIRKFEKKVRYASRKARADVRRRVKGRFVKAGDAYDYDPLN 409

Query: 555  QTRSC 541
            QTRSC
Sbjct: 410  QTRSC 414


>ref|XP_003556888.1| PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Glycine max]
          Length = 446

 Score =  413 bits (1062), Expect = e-113
 Identities = 231/438 (52%), Positives = 285/438 (65%), Gaps = 13/438 (2%)
 Frame = -3

Query: 1815 INW---KV*LRMGQLCDYCGEQRAMVYCRSDAASLCLSCDRNVHSANALSRRHSRTLLCE 1645
            I+W   KV L+MG +CD+CG+QR+MVYCRSDAA LCLSCDRNVHSANALS+RHSRTLLCE
Sbjct: 27   ISWCKRKVSLKMGYICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLLCE 86

Query: 1644 RCNTQPASVRCVSDKMSLCQNCDWNEHCNSASSSTSHERQTINCYSGCPSAEELSRIWSF 1465
            RCN+QPA VRCV +K+SLCQNCDW  H  S SSST H+RQ INCYSGCPSA ELS IWSF
Sbjct: 87   RCNSQPAFVRCVEEKISLCQNCDWLGHGTSTSSST-HKRQAINCYSGCPSAAELSSIWSF 145

Query: 1464 VLDTPSSDEYACEKRMGLMSIDEN-CV------SNYSGCSDSNGNSTVDPSFQGKSKMEN 1306
            VL+  +  E  CE+ +GLMSI+EN CV       N SG  +      ++ S  G S M  
Sbjct: 146  VLEIAAISESTCEQELGLMSINENKCVGVPPEDQNVSGSDEVTDLPALNKSLVGASLMPE 205

Query: 1305 EDQFSIWAGSSSVAAGNSMHCSVNQLAG-SGDPTRKPSCLGPKGFEFGEED-FSNDFNLA 1132
                            +S  C ++Q AG + +   K  C   K     E+D   +DFN+ 
Sbjct: 206  ---------------SSSEPCILDQPAGPTNECLPKLYCPATKCPALSEDDNLYDDFNMD 250

Query: 1131 DVDINFENYEELFGMSQNHLEQDFEHNGIDNMFGLRHMSALDSGCEGGPYVEGSSAGKVK 952
            +VD++ ENYEELFGM+ +H E+ FE+ GID++FG + MSA DS C+     EGSS G+V 
Sbjct: 251  EVDLDLENYEELFGMALSHSEELFENGGIDSLFGTKGMSAGDSNCQEAIAAEGSSVGQVN 310

Query: 951  LMQAACSD-ASAESAMSAKTEPNFGYSTRQAHSSLSISFSGLTGDSNAGDYQDSGVSSML 775
             MQ ACS+ ASA+S +S KTEP   ++ RQ  S+L  SFSG+TG+S+AGDYQD G SSML
Sbjct: 311  AMQPACSNAASADSILSTKTEPILCFTGRQTQSNL--SFSGVTGESSAGDYQDCGASSML 368

Query: 774  LMDEPPWLPPGPESSYPSASRDSAVMRYXXXXXXXXXXXKIRYESXXXXXXXXXXXXXRF 595
            LM EPPW  P PE+S  SA+R +AVMRY           K+RY S             RF
Sbjct: 369  LMGEPPWFAPCPENSLQSANRSNAVMRYKEKKKTRMFDKKVRYASRKARADVRRRVKGRF 428

Query: 594  VKAGEAYDYDPMCQTRSC 541
            VKAG+ YDYDP+  TRSC
Sbjct: 429  VKAGDVYDYDPLSTTRSC 446


>ref|XP_002264506.2| PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Vitis vinifera]
            gi|296085061|emb|CBI28476.3| unnamed protein product
            [Vitis vinifera]
          Length = 415

 Score =  413 bits (1062), Expect = e-113
 Identities = 224/419 (53%), Positives = 278/419 (66%), Gaps = 3/419 (0%)
 Frame = -3

Query: 1791 MGQLCDYCGEQRAMVYCRSDAASLCLSCDRNVHSANALSRRHSRTLLCERCNTQPASVRC 1612
            MG +CD+CGEQR++VYCRSDAASLCLSCDR+VHSANALSRRHSRTLLCERCN+QPA VRC
Sbjct: 1    MGYICDFCGEQRSIVYCRSDAASLCLSCDRHVHSANALSRRHSRTLLCERCNSQPAFVRC 60

Query: 1611 VSDKMSLCQNCDWNEHCNSASSSTSHERQTINCYSGCPSAEELSRIWSFVLDTPSSDEYA 1432
            + +K+SLCQNCDW  H  S ++S SH+++TINCYSGCPS+E LS +W FVLD PS+    
Sbjct: 61   IEEKISLCQNCDWTGHGGSTTTS-SHKKETINCYSGCPSSEGLSTMWPFVLDLPSTGNST 119

Query: 1431 CEKRMGLMSIDENCVSNYSGCSDSNGNSTVDPSFQGKSKMENEDQFSIWAGSSSVAAGNS 1252
            CE+ + LM ++E    N  G   ++       + +  +   N D+ SI  GSSSV   NS
Sbjct: 120  CEQGLSLMCLNETSEMNSWGPPGNSSRQDASLTVE-VNDANNVDKSSILIGSSSVPELNS 178

Query: 1251 MHCSVNQLAGSGDPT-RKPSCLGPKGFEFGEED-FSNDFNLADVDINFENYEELFGMSQN 1078
                ++Q +GS D T  K  C G     F E+D    DFN+ +VD+N ENYEELFG++ +
Sbjct: 179  PSQKLDQPSGSADLTLPKLLCPGTDDLGFCEDDSLYEDFNMDEVDLNLENYEELFGVALS 238

Query: 1077 HLEQDFEHNGIDNMFGLRHMSALDSGCEGGPYVEGSSAGKVKLMQAACSD-ASAESAMSA 901
            H EQ FE+ GID++FG    S  DS C+G    EG S G    +Q   S+ ASA+S MS+
Sbjct: 239  HSEQLFENGGIDSLFGKMDTSGADSHCQGAVIAEG-SVGLANAVQPTYSNAASADSIMSS 297

Query: 900  KTEPNFGYSTRQAHSSLSISFSGLTGDSNAGDYQDSGVSSMLLMDEPPWLPPGPESSYPS 721
            KTEP   ++ +QAHSSL  SFSGLTG+S+AGDYQD G S   LM EPPW PPGPESS PS
Sbjct: 298  KTEPILCFTGKQAHSSL--SFSGLTGESSAGDYQDCGASPTFLMGEPPWCPPGPESSLPS 355

Query: 720  ASRDSAVMRYXXXXXXXXXXXKIRYESXXXXXXXXXXXXXRFVKAGEAYDYDPMCQTRS 544
             SR SAVMRY           ++RY S             RFVKAGEAYDYDP+ +TRS
Sbjct: 356  TSRSSAVMRYREKKKNRKFDKRVRYASRKARADVRQRVKGRFVKAGEAYDYDPISETRS 414


>ref|XP_004139988.1| PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Cucumis sativus]
            gi|449475645|ref|XP_004154511.1| PREDICTED: zinc finger
            protein CONSTANS-LIKE 9-like [Cucumis sativus]
          Length = 415

 Score =  406 bits (1044), Expect = e-111
 Identities = 218/420 (51%), Positives = 280/420 (66%), Gaps = 3/420 (0%)
 Frame = -3

Query: 1791 MGQLCDYCGEQRAMVYCRSDAASLCLSCDRNVHSANALSRRHSRTLLCERCNTQPASVRC 1612
            MG +CD+CG+QR+MVYCRSDAA LCLSCDRNVHSANALSRRH+RTLLCERC+ QP++VRC
Sbjct: 1    MGFMCDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHTRTLLCERCHLQPSTVRC 60

Query: 1611 VSDKMSLCQNCDWNEHCNSASSSTSHERQTINCYSGCPSAEELSRIWSFVLDTPSSDEYA 1432
            + +++SLCQNCDW  H +S  +S+SH+RQTINCYSGCPSA ELS IWSFVLD PS ++ A
Sbjct: 61   IEERVSLCQNCDWTGHGSSTLASSSHKRQTINCYSGCPSAAELSCIWSFVLDVPSVND-A 119

Query: 1431 CEKRMGLMSIDENCVSNYSGCSDSNGNSTVDPSFQGKSKMENEDQFSIWAGSSSVAAGNS 1252
            CEK +GLMSI E  ++     S++N    + P     S + + ++ ++  GSSS+  G+ 
Sbjct: 120  CEKELGLMSIAETDLTGAWSPSENNAGQRM-PGSTEASDVCSREKSNVLVGSSSL-IGSR 177

Query: 1251 MHCSVNQLAGSGDPTRKPSCLGPKGFEF--GEEDFSNDFNLADVDINFENYEELFGMSQN 1078
             H S   +        K  C G K  EF   ++D   +F++ ++D+N ENYE+LF MS N
Sbjct: 178  PHTSDQPVELDNVALPKFCCPGTKVAEFCGEDDDLYKEFDMDEMDLNLENYEDLFSMSLN 237

Query: 1077 HLEQDFEHNGIDNMFGLRHMSALDSGCEGGPYVEGSSAGKVKLMQAACSD-ASAESAMSA 901
            H E+ FE+ GID+ F  + +S  DS        EGSS G V+ MQ A S+ ASA+S MS 
Sbjct: 238  HSEEFFENGGIDSFFEAKGLSFEDSVSHSAVVAEGSSMGVVQQMQPAYSNGASADSVMST 297

Query: 900  KTEPNFGYSTRQAHSSLSISFSGLTGDSNAGDYQDSGVSSMLLMDEPPWLPPGPESSYPS 721
            KTEP   +++RQA S +  SFSGLTG+S+AGD+QD G SSMLLM EPPW  PG ESS+PS
Sbjct: 298  KTEPILCFNSRQAQSGM--SFSGLTGESSAGDHQDCGASSMLLMGEPPWCAPGTESSFPS 355

Query: 720  ASRDSAVMRYXXXXXXXXXXXKIRYESXXXXXXXXXXXXXRFVKAGEAYDYDPMCQTRSC 541
              R+SAV RY            +RY +             RFVKAGEAYDYDP+ Q RSC
Sbjct: 356  TDRNSAVQRYKEKKKTRKFEKTVRYATRKARADVRRRVKGRFVKAGEAYDYDPLNQARSC 415


Top