BLASTX nr result

ID: Coptis25_contig00022921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022921
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]   181   8e-44
emb|CBI22982.3| unnamed protein product [Vitis vinifera]              169   4e-40
ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem...   164   2e-38
ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|2...   163   3e-38
ref|NP_001050070.2| Os03g0341200 [Oryza sativa Japonica Group] g...   153   2e-35

>emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]
          Length = 1413

 Score =  181 bits (460), Expect = 8e-44
 Identities = 95/165 (57%), Positives = 124/165 (75%), Gaps = 3/165 (1%)
 Frame = +1

Query: 1    VEVTCKRLTAPLYNFVTLIQTKQQENAQSKGIISKIKRENRCIPDLVFQIEDYEKYLIQL 180
            VE+TC++LT PLY+FV L+Q  QQENA+S+G++SKIKRENRCIPDL+FQIEDYEKYLIQL
Sbjct: 1248 VELTCRQLTVPLYSFVALMQRDQQENAKSRGLLSKIKRENRCIPDLIFQIEDYEKYLIQL 1307

Query: 181  SKLTKINLLRYAKRSTARDFKIIEPKKIVDRQEEEPD-GESNPVNSVASQNEACDEENES 357
            SK TK+NLLR+AKRST+RDFKI++  +    +EE P+   S  V +   Q    +E N S
Sbjct: 1308 SKATKVNLLRHAKRSTSRDFKILDHPRTNTGEEEPPNHNHSTAVQNETGQECEDNEGNGS 1367

Query: 358  EKVISPESSNAVAADDSGSDGEATSI--RTKRARINKVVQDSDEE 486
            E+  SPE  + +AA+DS SDGE        KR++++KVVQDSD+E
Sbjct: 1368 ERAPSPEPHSPLAAEDSESDGEDRDALPNPKRSKMSKVVQDSDDE 1412


>emb|CBI22982.3| unnamed protein product [Vitis vinifera]
          Length = 1361

 Score =  169 bits (428), Expect = 4e-40
 Identities = 89/158 (56%), Positives = 117/158 (74%), Gaps = 3/158 (1%)
 Frame = +1

Query: 1    VEVTCKRLTAPLYNFVTLIQTKQQENAQSKGIISKIKRENRCIPDLVFQIEDYEKYLIQL 180
            VE+TC++LT PLY+FV L+Q  QQENA+S+G++SKIKRENRCIPDL+FQIEDYEKYLIQL
Sbjct: 1195 VELTCRQLTVPLYSFVALMQRDQQENAKSRGLLSKIKRENRCIPDLIFQIEDYEKYLIQL 1254

Query: 181  SKLTKINLLRYAKRSTARDFKIIEPKKIVDRQEEEPD-GESNPVNSVASQNEACDEENES 357
            SK TK+NLLR+AKRST+RDFKI++  +    +EE P+   S  V +   Q    +E N S
Sbjct: 1255 SKATKVNLLRHAKRSTSRDFKILDHPRTNTGEEEPPNHNHSTAVQNETGQECEDNEGNGS 1314

Query: 358  EKVISPESSNAVAADDSGSDGEATSI--RTKRARINKV 465
            E+  SPE  + +AA+DS SDGE        KR++++KV
Sbjct: 1315 ERAPSPEPHSPLAAEDSESDGEDRDALPNPKRSKMSKV 1352


>ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group I protein-like
            [Vitis vinifera]
          Length = 1427

 Score =  164 bits (414), Expect = 2e-38
 Identities = 95/200 (47%), Positives = 124/200 (62%), Gaps = 38/200 (19%)
 Frame = +1

Query: 1    VEVTCKRLTAPLYNFVTLIQT-----------------------------------KQQE 75
            VE+TC++LT PLY+FV L+Q                                     QQE
Sbjct: 1227 VELTCRQLTVPLYSFVALMQRVQTIDLXAVSHCALLLLFVYTCSLFLVVKVIPYVQDQQE 1286

Query: 76   NAQSKGIISKIKRENRCIPDLVFQIEDYEKYLIQLSKLTKINLLRYAKRSTARDFKIIEP 255
            NA+S+G++SKIKRENRCIPDL+FQIEDYEKYLIQLSK TK+NLLR+AKRST+RDFKI++ 
Sbjct: 1287 NAKSRGLLSKIKRENRCIPDLIFQIEDYEKYLIQLSKATKVNLLRHAKRSTSRDFKILDH 1346

Query: 256  KKIVDRQEEEPD-GESNPVNSVASQNEACDEENESEKVISPESSNAVAADDSGSDGEATS 432
             +    +EE P+   S  V +   Q    +E N SE+  SPE  + +AA+DS SDGE   
Sbjct: 1347 PRTNTGEEEPPNHNHSTAVQNETGQECEDNEGNGSERAPSPEPHSPLAAEDSESDGEDRD 1406

Query: 433  I--RTKRARINKVVQDSDEE 486
                 KR++++KVVQDSD+E
Sbjct: 1407 ALPNPKRSKMSKVVQDSDDE 1426


>ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|222864551|gb|EEF01682.1|
            predicted protein [Populus trichocarpa]
          Length = 1406

 Score =  163 bits (412), Expect = 3e-38
 Identities = 91/168 (54%), Positives = 126/168 (75%), Gaps = 6/168 (3%)
 Frame = +1

Query: 1    VEVTCKRLTAPLYNFVTLIQTKQQENAQSKGIISKIKRENRCIPDLVFQIEDYEKYLIQL 180
            VE+TCK+LT PLYNFV  +Q ++QENA SK   +KIKREN+CIPDL++QIED EKYLIQL
Sbjct: 1240 VELTCKQLTVPLYNFVAEMQ-REQENANSKCTANKIKRENKCIPDLIYQIEDCEKYLIQL 1298

Query: 181  SKLTKINLLRYAKRSTARDFKIIEPKKIVDRQEEEPDGESNPVNSVASQN---EACDEE- 348
            SK++KINLLR+AKRST+RDFKII+ +KI+  +E+EP+ E     +  ++N   E+ D E 
Sbjct: 1299 SKVSKINLLRHAKRSTSRDFKIIDSRKII-TEEDEPNHEPACHAAATAENGSPESGDNEG 1357

Query: 349  NESEKVISPESSNAVAADDSGSDGE--ATSIRTKRARINKVVQDSDEE 486
            NES+KV+S +S + ++ ++S SDGE        KR + ++VV DSD+E
Sbjct: 1358 NESDKVLSSQSGSPLSEEESASDGENGGALPHAKRVKRDRVVLDSDDE 1405


>ref|NP_001050070.2| Os03g0341200 [Oryza sativa Japonica Group]
            gi|255674489|dbj|BAF11984.2| Os03g0341200 [Oryza sativa
            Japonica Group]
          Length = 1284

 Score =  153 bits (387), Expect = 2e-35
 Identities = 83/164 (50%), Positives = 106/164 (64%), Gaps = 3/164 (1%)
 Frame = +1

Query: 4    EVTCKRLTAPLYNFVTLIQTKQQENAQSKGIISKIKRENRCIPDLVFQIEDYEKYLIQLS 183
            EVTC+ LTAPLY FV L+Q  QQ  A  +GI+++IKRE++CIPDL+FQIEDYEKYLIQLS
Sbjct: 1120 EVTCRMLTAPLYVFVALVQENQQ--ASKRGILARIKRESKCIPDLIFQIEDYEKYLIQLS 1177

Query: 184  KLTKINLLRYAKRSTARDFKIIEPKKIVDRQE---EEPDGESNPVNSVASQNEACDEENE 354
            KLTK+NLLR+AKRS ARDFK I+ K  ++R          E+ P       +   +   +
Sbjct: 1178 KLTKVNLLRHAKRSVARDFK-IQSKDELERNSTAARAASSENMPEEDAEGPDAPLETNGD 1236

Query: 355  SEKVISPESSNAVAADDSGSDGEATSIRTKRARINKVVQDSDEE 486
             +   S  S N V   +S  +GE    R KRA+ N +VQDSDEE
Sbjct: 1237 EDPQASARSDNTVEDSESDEEGERVLARRKRAKTNSIVQDSDEE 1280


Top