BLASTX nr result

ID: Coptis25_contig00022919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022919
         (1014 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30393.3| unnamed protein product [Vitis vinifera]              462   e-128
ref|XP_002274764.1| PREDICTED: thylakoid ADP,ATP carrier protein...   462   e-128
ref|XP_002309137.1| predicted protein [Populus trichocarpa] gi|2...   457   e-126
ref|XP_002323577.1| predicted protein [Populus trichocarpa] gi|2...   451   e-124
ref|XP_003520555.1| PREDICTED: probable envelope ADP,ATP carrier...   450   e-124

>emb|CBI30393.3| unnamed protein product [Vitis vinifera]
          Length = 389

 Score =  462 bits (1188), Expect = e-128
 Identities = 240/331 (72%), Positives = 267/331 (80%), Gaps = 4/331 (1%)
 Frame = +1

Query: 34   EEQAVLVWRKIPSLYSSSQKSFNETT--LPMGKRGSFNKGGGFACVSMVEKRVNDN--KE 201
            EE+ VLVWR IP L +S+          L   K G       FA VS+++K   +     
Sbjct: 11   EEKGVLVWRSIPGLEASNTGLVGSPVPQLQWRKNGFSGISCNFASVSVLDKGFQNELPPT 70

Query: 202  FTPTSDQLIKHPLALLALVPKDXXXXXXXXXXXXXXKTVTAPLDRIKLLMQTHGLRVGQE 381
             TPT+ QL KHPLAL+ALVPKD              K+VTAPLDRIKLLMQTHGLRVG+E
Sbjct: 71   STPTAAQLFKHPLALVALVPKDISLFTAGAVAGAAAKSVTAPLDRIKLLMQTHGLRVGEE 130

Query: 382  SAQKGIRFIEAITLIGKEEGFKGYWKGNLPQVIRIIPYSAVQLFAYETYKKLFRGADGEL 561
            SA+K I FIEAITLIGKEEG KGYWKGNLPQVIRIIPYSAVQLFAYETYKKLFRG DGEL
Sbjct: 131  SAKKAIGFIEAITLIGKEEGLKGYWKGNLPQVIRIIPYSAVQLFAYETYKKLFRGKDGEL 190

Query: 562  SVLGRLAAGACAGMTSTLVTYPLDVLRLRLAVEPGCKTMSQVALGMLRDEGMASFYNGLG 741
            SV+GRLAAGACAGMTST VTYPLDVLRLRLAVEPG +TMS+VAL +LR+EG+ASFY GLG
Sbjct: 191  SVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPGHQTMSEVALNILREEGVASFYKGLG 250

Query: 742  PSLIGIAPYIAVNFCIFDLVKKSLPEKYQKRTESSLVTALVSATLATLMCYPLDTVRRQM 921
            PSL+GIAPYIAVNFC+FDLVKKSLPEKYQKRTE+SL+T LVSAT+AT+MCYPLDTVRRQM
Sbjct: 251  PSLLGIAPYIAVNFCVFDLVKKSLPEKYQKRTETSLLTGLVSATIATVMCYPLDTVRRQM 310

Query: 922  QMRGTPYKTILDAFPGIVARDGIVGLYRGFV 1014
            QM+G PYKT+LDA PGIV RDG +GLYRGFV
Sbjct: 311  QMKGAPYKTVLDAIPGIVERDGFIGLYRGFV 341


>ref|XP_002274764.1| PREDICTED: thylakoid ADP,ATP carrier protein, chloroplastic [Vitis
            vinifera]
          Length = 381

 Score =  462 bits (1188), Expect = e-128
 Identities = 240/331 (72%), Positives = 267/331 (80%), Gaps = 4/331 (1%)
 Frame = +1

Query: 34   EEQAVLVWRKIPSLYSSSQKSFNETT--LPMGKRGSFNKGGGFACVSMVEKRVNDN--KE 201
            EE+ VLVWR IP L +S+          L   K G       FA VS+++K   +     
Sbjct: 3    EEKGVLVWRSIPGLEASNTGLVGSPVPQLQWRKNGFSGISCNFASVSVLDKGFQNELPPT 62

Query: 202  FTPTSDQLIKHPLALLALVPKDXXXXXXXXXXXXXXKTVTAPLDRIKLLMQTHGLRVGQE 381
             TPT+ QL KHPLAL+ALVPKD              K+VTAPLDRIKLLMQTHGLRVG+E
Sbjct: 63   STPTAAQLFKHPLALVALVPKDISLFTAGAVAGAAAKSVTAPLDRIKLLMQTHGLRVGEE 122

Query: 382  SAQKGIRFIEAITLIGKEEGFKGYWKGNLPQVIRIIPYSAVQLFAYETYKKLFRGADGEL 561
            SA+K I FIEAITLIGKEEG KGYWKGNLPQVIRIIPYSAVQLFAYETYKKLFRG DGEL
Sbjct: 123  SAKKAIGFIEAITLIGKEEGLKGYWKGNLPQVIRIIPYSAVQLFAYETYKKLFRGKDGEL 182

Query: 562  SVLGRLAAGACAGMTSTLVTYPLDVLRLRLAVEPGCKTMSQVALGMLRDEGMASFYNGLG 741
            SV+GRLAAGACAGMTST VTYPLDVLRLRLAVEPG +TMS+VAL +LR+EG+ASFY GLG
Sbjct: 183  SVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPGHQTMSEVALNILREEGVASFYKGLG 242

Query: 742  PSLIGIAPYIAVNFCIFDLVKKSLPEKYQKRTESSLVTALVSATLATLMCYPLDTVRRQM 921
            PSL+GIAPYIAVNFC+FDLVKKSLPEKYQKRTE+SL+T LVSAT+AT+MCYPLDTVRRQM
Sbjct: 243  PSLLGIAPYIAVNFCVFDLVKKSLPEKYQKRTETSLLTGLVSATIATVMCYPLDTVRRQM 302

Query: 922  QMRGTPYKTILDAFPGIVARDGIVGLYRGFV 1014
            QM+G PYKT+LDA PGIV RDG +GLYRGFV
Sbjct: 303  QMKGAPYKTVLDAIPGIVERDGFIGLYRGFV 333


>ref|XP_002309137.1| predicted protein [Populus trichocarpa] gi|222855113|gb|EEE92660.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  457 bits (1177), Expect = e-126
 Identities = 235/343 (68%), Positives = 278/343 (81%), Gaps = 13/343 (3%)
 Frame = +1

Query: 25   MKEEEQAVLVWRKIPSLYSSSQKSFNETTL---PMGKRGSF--------NKG--GGFACV 165
            M+EEE+A+L ++ +P+L  +S  S +ETT    P+ +   F        N G  G FA V
Sbjct: 1    MREEERAILSFQTLPNL-KTSHSSLSETTHHREPLWRNAQFSCRIRSGGNNGSFGNFASV 59

Query: 166  SMVEKRVNDNKEFTPTSDQLIKHPLALLALVPKDXXXXXXXXXXXXXXKTVTAPLDRIKL 345
            SM E + +   EF P+S QL+K+PLA+LA VP+D              KTVTAPLDRIKL
Sbjct: 60   SMAEMKEDGRNEFAPSSAQLLKYPLAILAYVPRDAAIFAAGAVAGAAAKTVTAPLDRIKL 119

Query: 346  LMQTHGLRVGQESAQKGIRFIEAITLIGKEEGFKGYWKGNLPQVIRIIPYSAVQLFAYET 525
            LMQTHG+R GQESA+K I FIEAI +IGKEEG KGYWKGNLPQVIRIIPYSAVQL AYET
Sbjct: 120  LMQTHGVRAGQESAKKAIGFIEAIVMIGKEEGVKGYWKGNLPQVIRIIPYSAVQLLAYET 179

Query: 526  YKKLFRGADGELSVLGRLAAGACAGMTSTLVTYPLDVLRLRLAVEPGCKTMSQVALGMLR 705
            YKKLF+G DGELSV+GRLAAGACAGMTST VTYPLDVLRLRLAV+PG +TMS++AL MLR
Sbjct: 180  YKKLFKGKDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVDPGYRTMSEIALTMLR 239

Query: 706  DEGMASFYNGLGPSLIGIAPYIAVNFCIFDLVKKSLPEKYQKRTESSLVTALVSATLATL 885
            +EG+ASFY GLGPSL+GIAPYIAVNFCIFDLVKKSLPEKYQ++T+S+L+TA+VSA +ATL
Sbjct: 240  EEGVASFYYGLGPSLLGIAPYIAVNFCIFDLVKKSLPEKYQQKTQSTLLTAVVSAAVATL 299

Query: 886  MCYPLDTVRRQMQMRGTPYKTILDAFPGIVARDGIVGLYRGFV 1014
             CYPLDTVRRQMQM+GTPYK++LDAFPGIV RDG++GLYRGF+
Sbjct: 300  TCYPLDTVRRQMQMKGTPYKSVLDAFPGIVQRDGVIGLYRGFL 342


>ref|XP_002323577.1| predicted protein [Populus trichocarpa] gi|222868207|gb|EEF05338.1|
            predicted protein [Populus trichocarpa]
          Length = 390

 Score =  451 bits (1161), Expect = e-124
 Identities = 233/346 (67%), Positives = 274/346 (79%), Gaps = 16/346 (4%)
 Frame = +1

Query: 25   MKEEEQAVLVWRKIPSLYSSSQKSFNETTL---PM-------------GKRGSFNKGGGF 156
            M+++E+A+L ++ +P+L  ++  S  ETT    P+             G  GSF   G F
Sbjct: 1    MRDKERAILCFQTLPNL-KTTHCSLTETTHHREPLWRNAQFSCRIRSDGSNGSF---GNF 56

Query: 157  ACVSMVEKRVNDNKEFTPTSDQLIKHPLALLALVPKDXXXXXXXXXXXXXXKTVTAPLDR 336
            A VSM E + +   EF P++ QL+KHPLA+LA  P+D              KTVTAPLDR
Sbjct: 57   ASVSMAENKKDKGNEFAPSTAQLLKHPLAILAFFPRDAAIFAAGAVAGAAAKTVTAPLDR 116

Query: 337  IKLLMQTHGLRVGQESAQKGIRFIEAITLIGKEEGFKGYWKGNLPQVIRIIPYSAVQLFA 516
            IKLLMQ HG+R GQESA+K I FIEAI +IGKEEG KGYWKGNLPQVIRIIPYSAVQLFA
Sbjct: 117  IKLLMQIHGVRAGQESAKKAIGFIEAIVMIGKEEGIKGYWKGNLPQVIRIIPYSAVQLFA 176

Query: 517  YETYKKLFRGADGELSVLGRLAAGACAGMTSTLVTYPLDVLRLRLAVEPGCKTMSQVALG 696
            YETYK LF+G DGELSV+GRLAAGACAGMTST VTYPLDVLRLRLAVEPG +TMS++AL 
Sbjct: 177  YETYKNLFKGKDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPGYRTMSEIALT 236

Query: 697  MLRDEGMASFYNGLGPSLIGIAPYIAVNFCIFDLVKKSLPEKYQKRTESSLVTALVSATL 876
            MLR+EG+ASFY GLGPSL+GIAPYIAVNFCIFDLVKKSLPEKYQ++T+SSL+TA+VSA +
Sbjct: 237  MLREEGVASFYYGLGPSLLGIAPYIAVNFCIFDLVKKSLPEKYQQKTQSSLLTAVVSAAV 296

Query: 877  ATLMCYPLDTVRRQMQMRGTPYKTILDAFPGIVARDGIVGLYRGFV 1014
            ATL CYPLDTVRRQMQM+GTPYK++LDA PGIV RDG++GLYRGFV
Sbjct: 297  ATLTCYPLDTVRRQMQMKGTPYKSVLDAIPGIVQRDGVIGLYRGFV 342



 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 2/166 (1%)
 Frame = +1

Query: 316 VTAPLDRIKLLMQTHGLRVGQESAQKGIRFIEAITL-IGKEEGFKGYWKGNLPQVIRIIP 492
           VT PLD ++L +          + + G R +  I L + +EEG   ++ G  P ++ I P
Sbjct: 210 VTYPLDVLRLRL----------AVEPGYRTMSEIALTMLREEGVASFYYGLGPSLLGIAP 259

Query: 493 YSAVQLFAYETYKKLFRGADGELSVLGRLAAGACAGMTSTLVTYPLDVLRLRLAVE-PGC 669
           Y AV    ++  KK       + +    L A   A + +TL  YPLD +R ++ ++    
Sbjct: 260 YIAVNFCIFDLVKKSLPEKYQQKTQSSLLTAVVSAAV-ATLTCYPLDTVRRQMQMKGTPY 318

Query: 670 KTMSQVALGMLRDEGMASFYNGLGPSLIGIAPYIAVNFCIFDLVKK 807
           K++     G+++ +G+   Y G  P+ +   P  ++    FD+VK+
Sbjct: 319 KSVLDAIPGIVQRDGVIGLYRGFVPNALKTLPNSSIRLTTFDIVKR 364


>ref|XP_003520555.1| PREDICTED: probable envelope ADP,ATP carrier protein,
            chloroplastic-like [Glycine max]
          Length = 384

 Score =  450 bits (1158), Expect = e-124
 Identities = 238/341 (69%), Positives = 271/341 (79%), Gaps = 12/341 (3%)
 Frame = +1

Query: 28   KEEEQAVLVWRKIPSLYSSSQKSFNETTL--PMGKR------GSFNKGGG----FACVSM 171
            + EE+A L WRKIP L  SS    N+  L  P   R      G F    G    FA VS+
Sbjct: 3    ESEERATLTWRKIPILLKSSP---NDVVLVPPTSPRKNDAVTGFFAPTSGTRCKFASVSV 59

Query: 172  VEKRVNDNKEFTPTSDQLIKHPLALLALVPKDXXXXXXXXXXXXXXKTVTAPLDRIKLLM 351
             E++ +  KEF PT+ QL++HPLA++ALVPKD              K+ TAPLDRIKLLM
Sbjct: 60   AERKFD--KEFAPTAAQLLQHPLAVVALVPKDAALFLAGALAGAAAKSFTAPLDRIKLLM 117

Query: 352  QTHGLRVGQESAQKGIRFIEAITLIGKEEGFKGYWKGNLPQVIRIIPYSAVQLFAYETYK 531
            QTHG+RVG  SA+K I FIEA+T+IGKEEG KGYWKGNLPQVIR+IPYSAVQLFAYE YK
Sbjct: 118  QTHGVRVGHGSAKKAIGFIEALTVIGKEEGIKGYWKGNLPQVIRVIPYSAVQLFAYEIYK 177

Query: 532  KLFRGADGELSVLGRLAAGACAGMTSTLVTYPLDVLRLRLAVEPGCKTMSQVALGMLRDE 711
            K+F+G DGELSVLGRLAAGA AGMTST +TYPLDVLRLRLAVEPG +TMS+VAL MLR+E
Sbjct: 178  KIFKGKDGELSVLGRLAAGAFAGMTSTFITYPLDVLRLRLAVEPGYRTMSEVALSMLREE 237

Query: 712  GMASFYNGLGPSLIGIAPYIAVNFCIFDLVKKSLPEKYQKRTESSLVTALVSATLATLMC 891
            G ASFY GLGPSLIGIAPYIAVNFC+FDL+KKSLPEKYQKRTE+SLVTA+VSA+LATL C
Sbjct: 238  GFASFYYGLGPSLIGIAPYIAVNFCVFDLLKKSLPEKYQKRTETSLVTAVVSASLATLTC 297

Query: 892  YPLDTVRRQMQMRGTPYKTILDAFPGIVARDGIVGLYRGFV 1014
            YPLDTVRRQMQ+RGTPYKT+LDA  GIVARDG++GLYRGFV
Sbjct: 298  YPLDTVRRQMQLRGTPYKTVLDAISGIVARDGVIGLYRGFV 338



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 5/182 (2%)
 Frame = +1

Query: 316 VTAPLDRIKLLMQTHGLRVGQESAQKGIRFIEAITL-IGKEEGFKGYWKGNLPQVIRIIP 492
           +T PLD ++L +          + + G R +  + L + +EEGF  ++ G  P +I I P
Sbjct: 206 ITYPLDVLRLRL----------AVEPGYRTMSEVALSMLREEGFASFYYGLGPSLIGIAP 255

Query: 493 YSAVQLFAYETYKKLFRGADGELSVLGRLAAGACAGMTSTLVTYPLDVLRLRLAVE-PGC 669
           Y AV    ++  KK       + +    + A   A + +TL  YPLD +R ++ +     
Sbjct: 256 YIAVNFCVFDLLKKSLPEKYQKRTETSLVTAVVSASL-ATLTCYPLDTVRRQMQLRGTPY 314

Query: 670 KTMSQVALGMLRDEGMASFYNGLGPSLIGIAPYIAVNFCIFDLVKKSL---PEKYQKRTE 840
           KT+     G++  +G+   Y G  P+ +   P  ++    +D+VK+ +    +++Q  TE
Sbjct: 315 KTVLDAISGIVARDGVIGLYRGFVPNALKNLPNSSIRLTTYDIVKRLIAASEKEFQTITE 374

Query: 841 SS 846
            +
Sbjct: 375 EN 376


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