BLASTX nr result
ID: Coptis25_contig00022904
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00022904 (1167 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002285521.1| PREDICTED: homeobox protein knotted-1-like 2... 224 4e-56 emb|CBI19343.3| unnamed protein product [Vitis vinifera] 223 6e-56 gb|AAV84585.1| knotted-like homeobox protein [Populus tomentosa] 210 6e-52 gb|AFZ78625.1| knotted-like protein [Populus tomentosa] 206 1e-50 ref|XP_002301134.1| predicted protein [Populus trichocarpa] gi|2... 205 2e-50 >ref|XP_002285521.1| PREDICTED: homeobox protein knotted-1-like 2 [Vitis vinifera] Length = 370 Score = 224 bits (570), Expect = 4e-56 Identities = 125/246 (50%), Positives = 162/246 (65%), Gaps = 11/246 (4%) Frame = -1 Query: 705 MEDYSQMSNHENTPSRGSFLYPTALGVXXXXXXXXXXXSLYGNN----LAMNSF------ 556 MEDY+Q+ ENT SR SFLY +++ NN + +N+F Sbjct: 1 MEDYNQLG--ENTTSRASFLYTSSVLAPNSSVYGRTSSGSNANNQQTQVPINTFHLQSGE 58 Query: 555 -LSHQPSLMVKTEAASSSHQHAREFHYSLLRGNXXXXXXXXXXXXXXXXXQGQRTRSFND 379 + +VKTEA++S QHA++FHY ++RG+ Q SF++ Sbjct: 59 CFQSEAHPVVKTEASTS--QHAQKFHYPIIRGHQTVDHQQQQ----------QGNESFSE 106 Query: 378 VDAMKAKIVSHPQYSNLLEAYMDCQKVGAPAEVVNQLAVVRREFETQQKAKITYRDAQAD 199 V+A+KAKI++HPQYSNLLEAYMDCQKVGAP EVV +LA VR+EFE++Q++ +T RDA D Sbjct: 107 VEAIKAKIIAHPQYSNLLEAYMDCQKVGAPPEVVERLAAVRQEFESRQRSSVTCRDASKD 166 Query: 198 PELDQFMEAYCDMLVKYREELMRPLQEAMEFMRRIEAQLKTISNDSIPIFTADGKCDGAG 19 PELDQFMEAY DMLVKYREEL RPLQEA +FMRRIE+QL +SN + IFT+D KC+G G Sbjct: 167 PELDQFMEAYYDMLVKYREELTRPLQEATDFMRRIESQLNMLSNGPVRIFTSDEKCEGVG 226 Query: 18 LSEDDQ 1 SE+DQ Sbjct: 227 SSEEDQ 232 >emb|CBI19343.3| unnamed protein product [Vitis vinifera] Length = 341 Score = 223 bits (569), Expect = 6e-56 Identities = 125/236 (52%), Positives = 159/236 (67%), Gaps = 1/236 (0%) Frame = -1 Query: 705 MEDYSQMSNHENTPSRGSFLYPTALGVXXXXXXXXXXXSLYGNNLAMNSF-LSHQPSLMV 529 MEDY+Q+ ENT SR SFLY +++ LA NS + +V Sbjct: 1 MEDYNQLG--ENTTSRASFLYTSSV-------------------LAPNSSCFQSEAHPVV 39 Query: 528 KTEAASSSHQHAREFHYSLLRGNXXXXXXXXXXXXXXXXXQGQRTRSFNDVDAMKAKIVS 349 KTEA++S QHA++FHY ++RG+ Q SF++V+A+KAKI++ Sbjct: 40 KTEASTS--QHAQKFHYPIIRGHQTVDHQQQQ----------QGNESFSEVEAIKAKIIA 87 Query: 348 HPQYSNLLEAYMDCQKVGAPAEVVNQLAVVRREFETQQKAKITYRDAQADPELDQFMEAY 169 HPQYSNLLEAYMDCQKVGAP EVV +LA VR+EFE++Q++ +T RDA DPELDQFMEAY Sbjct: 88 HPQYSNLLEAYMDCQKVGAPPEVVERLAAVRQEFESRQRSSVTCRDASKDPELDQFMEAY 147 Query: 168 CDMLVKYREELMRPLQEAMEFMRRIEAQLKTISNDSIPIFTADGKCDGAGLSEDDQ 1 DMLVKYREEL RPLQEA +FMRRIE+QL +SN + IFT+D KC+G G SE+DQ Sbjct: 148 YDMLVKYREELTRPLQEATDFMRRIESQLNMLSNGPVRIFTSDEKCEGVGSSEEDQ 203 >gb|AAV84585.1| knotted-like homeobox protein [Populus tomentosa] Length = 368 Score = 210 bits (534), Expect = 6e-52 Identities = 124/247 (50%), Positives = 154/247 (62%), Gaps = 12/247 (4%) Frame = -1 Query: 705 MEDYSQMSNHENTPSRGSFLYPTALGVXXXXXXXXXXXSLYGNN----LAMNSF------ 556 MEDY+QMS ENT RG+FLY + L +N + +N F Sbjct: 1 MEDYNQMS--ENTTPRGNFLYASQLLAPNSSPYGRTSSGSTVSNQQTQMPLNPFHLQSND 58 Query: 555 --LSHQPSLMVKTEAASSSHQHAREFHYSLLRGNXXXXXXXXXXXXXXXXXQGQRTRSFN 382 +VKTEA++S HA++FHY LLRG Q + S + Sbjct: 59 QCFQSDTHPIVKTEASTS---HAQKFHYPLLRGYQTINQQQ------------QGSESSS 103 Query: 381 DVDAMKAKIVSHPQYSNLLEAYMDCQKVGAPAEVVNQLAVVRREFETQQKAKITYRDAQA 202 +V+A+KAKI++HPQYSNLLEAYMDCQKVGAP EVV +LA R+EFE++Q++ IT RD Sbjct: 104 EVEAIKAKIIAHPQYSNLLEAYMDCQKVGAPPEVVARLAAARQEFESRQRSFITSRDNSK 163 Query: 201 DPELDQFMEAYCDMLVKYREELMRPLQEAMEFMRRIEAQLKTISNDSIPIFTADGKCDGA 22 DPELDQFMEAYCDMLVKYREEL RP+QEAM+FMRRIE QL I + + IF +D K +G Sbjct: 164 DPELDQFMEAYCDMLVKYREELTRPIQEAMDFMRRIETQLNMICHGPLRIFNSDDKSEGV 223 Query: 21 GLSEDDQ 1 G SEDDQ Sbjct: 224 GSSEDDQ 230 >gb|AFZ78625.1| knotted-like protein [Populus tomentosa] Length = 368 Score = 206 bits (523), Expect = 1e-50 Identities = 123/247 (49%), Positives = 153/247 (61%), Gaps = 12/247 (4%) Frame = -1 Query: 705 MEDYSQMSNHENTPSRGSFLYPTALGVXXXXXXXXXXXSLYGNN----LAMNSF------ 556 MEDY+QMS ENT RG+FLY + L +N + +N F Sbjct: 1 MEDYNQMS--ENTTPRGNFLYASQLLAPNSSPYGRTSSGSTVSNQQTQMPLNPFHLQSND 58 Query: 555 --LSHQPSLMVKTEAASSSHQHAREFHYSLLRGNXXXXXXXXXXXXXXXXXQGQRTRSFN 382 +VKTEA++S HA++FHY LLRG Q + S + Sbjct: 59 QCFQSDTHPIVKTEASTS---HAQKFHYPLLRGYQTINQQQ------------QGSESSS 103 Query: 381 DVDAMKAKIVSHPQYSNLLEAYMDCQKVGAPAEVVNQLAVVRREFETQQKAKITYRDAQA 202 +V+A+KAKI++HPQYSNLLEAYMDCQKVGAP EVV +LA R+EFE++Q++ IT RD Sbjct: 104 EVEAIKAKIIAHPQYSNLLEAYMDCQKVGAPPEVVARLAAARQEFESRQRSFITSRDNSK 163 Query: 201 DPELDQFMEAYCDMLVKYREELMRPLQEAMEFMRRIEAQLKTISNDSIPIFTADGKCDGA 22 DPELDQFMEAY DMLVKYREEL RP+QEAM+FMRRIE QL I + + IF +D K +G Sbjct: 164 DPELDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNMICHGPLRIFNSDDKSEGV 223 Query: 21 GLSEDDQ 1 G SEDDQ Sbjct: 224 GSSEDDQ 230 >ref|XP_002301134.1| predicted protein [Populus trichocarpa] gi|222842860|gb|EEE80407.1| predicted protein [Populus trichocarpa] gi|225626279|gb|ACN97189.1| KNOX transcription factor [Populus trichocarpa] Length = 368 Score = 205 bits (521), Expect = 2e-50 Identities = 122/247 (49%), Positives = 153/247 (61%), Gaps = 12/247 (4%) Frame = -1 Query: 705 MEDYSQMSNHENTPSRGSFLYPTALGVXXXXXXXXXXXSLYGNN----LAMNSF------ 556 MEDY+QMS ENT RG+FLY + L +N + +N F Sbjct: 1 MEDYNQMS--ENTTPRGNFLYASQLLAPNSSPYGRTSSGSTVSNQQTQMPLNPFHLQSND 58 Query: 555 --LSHQPSLMVKTEAASSSHQHAREFHYSLLRGNXXXXXXXXXXXXXXXXXQGQRTRSFN 382 +VKTEA++S HA++FHY LLRG Q + S + Sbjct: 59 QCFQSDTHPIVKTEASTS---HAQKFHYPLLRGYQTINQQQ------------QGSESSS 103 Query: 381 DVDAMKAKIVSHPQYSNLLEAYMDCQKVGAPAEVVNQLAVVRREFETQQKAKITYRDAQA 202 +V+A+KAKI++HPQYSNL+EAYMDCQKVGAP EVV +LA R+EFE++Q++ IT RD Sbjct: 104 EVEAIKAKIIAHPQYSNLMEAYMDCQKVGAPPEVVARLAAARQEFESRQRSFITSRDNSK 163 Query: 201 DPELDQFMEAYCDMLVKYREELMRPLQEAMEFMRRIEAQLKTISNDSIPIFTADGKCDGA 22 DPELDQFMEAY DMLVKYREEL RP+QEAM+FMRRIE QL I + + IF +D K +G Sbjct: 164 DPELDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNMICHGPLRIFNSDDKSEGV 223 Query: 21 GLSEDDQ 1 G SEDDQ Sbjct: 224 GSSEDDQ 230