BLASTX nr result

ID: Coptis25_contig00022899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022899
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618257.1| Zn-dependent protease with chaperone functio...    62   6e-08
ref|XP_003588892.1| Mitochondrial metalloendopeptidase OMA1 [Med...    61   8e-08
ref|XP_003561562.1| PREDICTED: mitochondrial metalloendopeptidas...    59   3e-07
ref|XP_003527421.1| PREDICTED: uncharacterized protein LOC100800...    58   7e-07
ref|XP_002318862.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07

>ref|XP_003618257.1| Zn-dependent protease with chaperone function [Medicago truncatula]
           gi|355493272|gb|AES74475.1| Zn-dependent protease with
           chaperone function [Medicago truncatula]
          Length = 292

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
 Frame = -3

Query: 234 TDGEVAACIAHEVGHIVAQHTVEFQHPNLNRCKREFEADYIGLLLMASAGYNPRIVVEFW 55
           TD E+A  +AHE+ HI+A H  E         + E+EADYIGLLLMA+AGY+P+   +++
Sbjct: 187 TDVELATMLAHEIAHIMAHHGCE---------RFEYEADYIGLLLMAAAGYDPQQAPKYY 237

Query: 54  ENMI-----LSYPDFSKGDDDHP 1
           E M      + YP  +     HP
Sbjct: 238 EKMAKLDAPVKYPVLASFPCSHP 260


>ref|XP_003588892.1| Mitochondrial metalloendopeptidase OMA1 [Medicago truncatula]
           gi|355477940|gb|AES59143.1| Mitochondrial
           metalloendopeptidase OMA1 [Medicago truncatula]
          Length = 294

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
 Frame = -3

Query: 234 TDGEVAACIAHEVGHIVAQHTVEFQHPNL----NRCKREFEADYIGLLLMASAGYNPRIV 67
           +D E A  IAHEV  +VA+H VE    NL         EFEADYIGLLLMA+AGY+PR+ 
Sbjct: 176 SDAEKATIIAHEVARVVARHFVEQVTKNLWFYAIHRMFEFEADYIGLLLMAAAGYDPRVA 235

Query: 66  VEFWENM 46
            + +E +
Sbjct: 236 PKVYEEL 242


>ref|XP_003561562.1| PREDICTED: mitochondrial metalloendopeptidase OMA1-like
           [Brachypodium distachyon]
          Length = 371

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 9/70 (12%)
 Frame = -3

Query: 234 TDGEVAACIAHEVGHIVAQHTVE---------FQHPNLNRCKREFEADYIGLLLMASAGY 82
           TD ++A  IAHEVGHI+A+H V+         F+ P+ ++ + E EADYIGLLL+ +AG+
Sbjct: 245 TDDDIATVIAHEVGHIIARHDVDIASRKPLRIFRLPHSSQ-RMEAEADYIGLLLLGAAGF 303

Query: 81  NPRIVVEFWE 52
            P I   F++
Sbjct: 304 EPHIARAFFQ 313


>ref|XP_003527421.1| PREDICTED: uncharacterized protein LOC100800848 [Glycine max]
          Length = 445

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 39/110 (35%), Positives = 52/110 (47%), Gaps = 32/110 (29%)
 Frame = -3

Query: 234 TDGEVAACIAHEVGHIVAQHTVE------------------------------FQHPNLN 145
           +D E+A  I HEVGH+VA+H  E                              F H   +
Sbjct: 302 SDAEIATIIGHEVGHVVARHNAEGITKNLWFAILQLILYLLFIPDIVNIISSLFLHLPFS 361

Query: 144 RCKREFEADYIGLLLMASAGYNPRIVVEFWENMILSYPDFSKGD--DDHP 1
           R + E EADYIGLLL+ASAGY+PR+  + +E +     D + GD    HP
Sbjct: 362 R-RMEVEADYIGLLLIASAGYDPRVAPKVYEKLGKFAGDSTFGDYFSTHP 410


>ref|XP_002318862.1| predicted protein [Populus trichocarpa] gi|222859535|gb|EEE97082.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 35/92 (38%), Positives = 44/92 (47%), Gaps = 29/92 (31%)
 Frame = -3

Query: 234 TDGEVAACIAHEVGHIVAQHTVE-----------------FQHPNLNRC----------- 139
           TD E+A  I HEVGH VA+H  E                 F  P++              
Sbjct: 238 TDAEIATIIGHEVGHAVARHAAEGITKNLWVAILQLILYQFIMPDIANAMSVLFLRLPFS 297

Query: 138 -KREFEADYIGLLLMASAGYNPRIVVEFWENM 46
            + E EADY+GLLLMASAGY+PRI    +E +
Sbjct: 298 RRMEIEADYVGLLLMASAGYDPRIAPRVYEKL 329


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