BLASTX nr result

ID: Coptis25_contig00022889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022889
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305773.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
ref|XP_002331940.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002459155.1| hypothetical protein SORBIDRAFT_03g046820 [S...    96   2e-18
emb|CBI24703.3| unnamed protein product [Vitis vinifera]               96   3e-18
ref|XP_004145007.1| PREDICTED: syntaxin-61-like [Cucumis sativus...    94   9e-18

>ref|XP_002305773.1| predicted protein [Populus trichocarpa] gi|222848737|gb|EEE86284.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/56 (83%), Positives = 54/56 (96%)
 Frame = +1

Query: 100 MSSAQDPFYIVKEEIQDSIDKLQSTFHQWQNISSNTGDRVRLTKELLAACESIAWQ 267
           MSSAQDPFYIVKEEIQ+SIDKLQS+FHQW+ ISS++G++VRLTKELLAACESI WQ
Sbjct: 1   MSSAQDPFYIVKEEIQESIDKLQSSFHQWERISSDSGEQVRLTKELLAACESIEWQ 56


>ref|XP_002331940.1| predicted protein [Populus trichocarpa] gi|222874717|gb|EEF11848.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/56 (80%), Positives = 51/56 (91%)
 Frame = +1

Query: 100 MSSAQDPFYIVKEEIQDSIDKLQSTFHQWQNISSNTGDRVRLTKELLAACESIAWQ 267
           MSSAQDPFYIVKEEIQ+SIDKLQS+FHQW+ IS + GD+V LTK+LLAACESI WQ
Sbjct: 1   MSSAQDPFYIVKEEIQESIDKLQSSFHQWERISCDMGDQVHLTKDLLAACESIEWQ 56


>ref|XP_002459155.1| hypothetical protein SORBIDRAFT_03g046820 [Sorghum bicolor]
           gi|241931130|gb|EES04275.1| hypothetical protein
           SORBIDRAFT_03g046820 [Sorghum bicolor]
          Length = 232

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 44/56 (78%), Positives = 50/56 (89%)
 Frame = +1

Query: 100 MSSAQDPFYIVKEEIQDSIDKLQSTFHQWQNISSNTGDRVRLTKELLAACESIAWQ 267
           MSSAQDPFYIV+EEIQDSIDKLQSTFH+W+  +SNTG+ V LTKELL +CESI WQ
Sbjct: 1   MSSAQDPFYIVREEIQDSIDKLQSTFHRWEQTASNTGEYVHLTKELLTSCESIEWQ 56


>emb|CBI24703.3| unnamed protein product [Vitis vinifera]
          Length = 301

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 45/57 (78%), Positives = 50/57 (87%)
 Frame = +1

Query: 97  KMSSAQDPFYIVKEEIQDSIDKLQSTFHQWQNISSNTGDRVRLTKELLAACESIAWQ 267
           KMSSAQDPFYIVKEEIQ+SIDKL STFHQW+ I   TG++V LTKELLA+CESI WQ
Sbjct: 54  KMSSAQDPFYIVKEEIQESIDKLLSTFHQWERIPVETGEQVHLTKELLASCESIEWQ 110


>ref|XP_004145007.1| PREDICTED: syntaxin-61-like [Cucumis sativus]
           gi|449474827|ref|XP_004154296.1| PREDICTED:
           syntaxin-61-like [Cucumis sativus]
           gi|449498935|ref|XP_004160675.1| PREDICTED:
           syntaxin-61-like [Cucumis sativus]
          Length = 246

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/56 (75%), Positives = 52/56 (92%)
 Frame = +1

Query: 100 MSSAQDPFYIVKEEIQDSIDKLQSTFHQWQNISSNTGDRVRLTKELLAACESIAWQ 267
           M SAQDPFY+VK+EIQ+SIDKLQS+FHQW+ ISS++G+RV+ TKELLA+CESI WQ
Sbjct: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEWQ 56


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