BLASTX nr result

ID: Coptis25_contig00022875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022875
         (1045 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]   139   4e-58
ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258...   139   4e-58
ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247...   140   7e-55
emb|CBI40561.3| unnamed protein product [Vitis vinifera]              139   2e-52
emb|CAN75139.1| hypothetical protein VITISV_040756 [Vitis vinifera]   140   1e-46

>emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]
          Length = 1160

 Score =  139 bits (349), Expect(3) = 4e-58
 Identities = 69/130 (53%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
 Frame = +1

Query: 592 QKSGGCGSKILELRRILRANWASNLRNSAEKLTSNSQFQNVDSPIGYSSCIPFV--RKVF 765
           ++ GGCG+ ILELRR  +ANW   L  S+E L  + Q  + +   G S C P V  R   
Sbjct: 420 KERGGCGTAILELRRNFKANWVMKLIQSSEDLICHYQLPDHNFSQGCSLCWPNVTGRNSE 479

Query: 766 KNPGVRRAAFQSDSKDNYLCCPNVFDLRNDEIEHF*MHWMRGEPIIVRRVLEKTSGVSWE 945
           +N  +R+AAF+    DN+L CPN  ++ +DEIEHF  HWMRGEP+IVR VL+KTSG+SWE
Sbjct: 480 QNSEMRKAAFRKHGHDNFLYCPNAVNITDDEIEHFQRHWMRGEPVIVRNVLDKTSGLSWE 539

Query: 946 PMVKWRAFRE 975
           PMV WRAFRE
Sbjct: 540 PMVMWRAFRE 549



 Score = 88.6 bits (218), Expect(3) = 4e-58
 Identities = 51/116 (43%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
 Frame = +3

Query: 258 NNCNTSIFNFRNTSIFNFHSWPNPDCPYDXXXXXXXXXXXXXQRGGNEAYSSQRQYVERA 437
           +NCNTSI +F         S PNPDC YD             Q GG+EA +S +Q+VERA
Sbjct: 313 DNCNTSIVDFH-------RSCPNPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERA 365

Query: 438 RSQDTDGKGATTASRKRSGW*G--AQSAEGSLTDVVGRFPDWRTNIDCSIRCTPKE 599
             Q  DGK   T  RKR+G       +A+ S  DV  +FPDWR   D SI C PKE
Sbjct: 366 HGQVADGKSKATTKRKRNGRVSEVELAADDSKADVSNQFPDWRATGDGSIPCPPKE 421



 Score = 45.8 bits (107), Expect(3) = 4e-58
 Identities = 19/25 (76%), Positives = 21/25 (84%)
 Frame = +2

Query: 971  ERGSKGNLKEETRSVKAIDCLDWCE 1045
            E G+K   KEETR+VKAIDCLDWCE
Sbjct: 549  ETGAKTKFKEETRTVKAIDCLDWCE 573


>ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258626 [Vitis vinifera]
          Length = 1035

 Score =  139 bits (349), Expect(3) = 4e-58
 Identities = 69/130 (53%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
 Frame = +1

Query: 592 QKSGGCGSKILELRRILRANWASNLRNSAEKLTSNSQFQNVDSPIGYSSCIPFV--RKVF 765
           ++ GGCG+ ILELRR  +ANW   L  S+E L  + Q  + +   G S C P V  R   
Sbjct: 420 KERGGCGTAILELRRNFKANWVMKLIQSSEDLICHYQLPDHNFSQGCSLCWPNVTGRNSE 479

Query: 766 KNPGVRRAAFQSDSKDNYLCCPNVFDLRNDEIEHF*MHWMRGEPIIVRRVLEKTSGVSWE 945
           +N  +R+AAF+    DN+L CPN  ++ +DEIEHF  HWMRGEP+IVR VL+KTSG+SWE
Sbjct: 480 QNSEMRKAAFRKHGHDNFLFCPNAVNITDDEIEHFQRHWMRGEPVIVRNVLDKTSGLSWE 539

Query: 946 PMVKWRAFRE 975
           PMV WRAFRE
Sbjct: 540 PMVMWRAFRE 549



 Score = 88.6 bits (218), Expect(3) = 4e-58
 Identities = 51/116 (43%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
 Frame = +3

Query: 258 NNCNTSIFNFRNTSIFNFHSWPNPDCPYDXXXXXXXXXXXXXQRGGNEAYSSQRQYVERA 437
           +NCNTSI +F         S PNPDC YD             Q GG+EA +S +Q+VERA
Sbjct: 313 DNCNTSIVDFH-------RSCPNPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERA 365

Query: 438 RSQDTDGKGATTASRKRSGW*G--AQSAEGSLTDVVGRFPDWRTNIDCSIRCTPKE 599
             Q  DGK   T  RKR+G       +A+ S  DV  +FPDWR   D SI C PKE
Sbjct: 366 HGQVADGKSKATTKRKRNGRVSEVELAADDSKADVSNQFPDWRATGDGSIPCPPKE 421



 Score = 45.8 bits (107), Expect(3) = 4e-58
 Identities = 19/25 (76%), Positives = 21/25 (84%)
 Frame = +2

Query: 971  ERGSKGNLKEETRSVKAIDCLDWCE 1045
            E G+K   KEETR+VKAIDCLDWCE
Sbjct: 549  ETGAKTKFKEETRTVKAIDCLDWCE 573


>ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247074 [Vitis vinifera]
          Length = 1876

 Score =  140 bits (352), Expect(3) = 7e-55
 Identities = 71/126 (56%), Positives = 87/126 (69%), Gaps = 2/126 (1%)
 Frame = +1

Query: 601  GGCGSKILELRRILRANWASNLRNSAEKLTSNSQFQNVDSPIGYSSCIPFVRKVF--KNP 774
            GGCG++ LELRRI   NW  +L  SAE LT N    ++D   G S C+P        K+ 
Sbjct: 1314 GGCGTETLELRRIFEPNWVDHLIKSAEDLTMNFGSPDIDFSQGCSLCLPTASTGSGEKHC 1373

Query: 775  GVRRAAFQSDSKDNYLCCPNVFDLRNDEIEHF*MHWMRGEPIIVRRVLEKTSGVSWEPMV 954
             VRRAAF+ +S D++L CPN   L ++EIEHF MHWMRGEP+IVR VLEKTSG+SW+PMV
Sbjct: 1374 EVRRAAFRENSHDDFLYCPNSACLGDNEIEHFQMHWMRGEPVIVRNVLEKTSGLSWDPMV 1433

Query: 955  KWRAFR 972
             WRAFR
Sbjct: 1434 MWRAFR 1439



 Score = 84.3 bits (207), Expect(3) = 7e-55
 Identities = 50/115 (43%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
 Frame = +3

Query: 258  NNCNTSIFNFRNTSIFNFHSWPNPDCPYDXXXXXXXXXXXXXQRGGNEAYSSQRQYVERA 437
            +NCNTSI N          S PNPDC YD             Q GGNEA SS +Q+VER 
Sbjct: 1205 DNCNTSIVNLHR-------SCPNPDCSYDLCLTCCRELRKGLQPGGNEAESSHQQFVERV 1257

Query: 438  RSQDTDGKGATTASRKRSGW--*GAQSAEGSLTDVVGRFPDWRTNIDCSIRCTPK 596
              Q T+ KG   A  +R GW   GA        D    FPDWR N+D SI C PK
Sbjct: 1258 NGQGTEVKGRIPAHDERYGWESDGAHPTNNYAADTCD-FPDWRVNMDGSIPCPPK 1311



 Score = 38.1 bits (87), Expect(3) = 7e-55
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +2

Query: 974  RGSKGNLKEETRSVKAIDCLDWCE 1045
            RG+   LKE+  SVKAIDC DWCE
Sbjct: 1439 RGATKVLKEDALSVKAIDCFDWCE 1462


>emb|CBI40561.3| unnamed protein product [Vitis vinifera]
          Length = 897

 Score =  139 bits (349), Expect(3) = 2e-52
 Identities = 69/130 (53%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
 Frame = +1

Query: 592 QKSGGCGSKILELRRILRANWASNLRNSAEKLTSNSQFQNVDSPIGYSSCIPFV--RKVF 765
           ++ GGCG+ ILELRR  +ANW   L  S+E L  + Q  + +   G S C P V  R   
Sbjct: 374 KERGGCGTAILELRRNFKANWVMKLIQSSEDLICHYQLPDHNFSQGCSLCWPNVTGRNSE 433

Query: 766 KNPGVRRAAFQSDSKDNYLCCPNVFDLRNDEIEHF*MHWMRGEPIIVRRVLEKTSGVSWE 945
           +N  +R+AAF+    DN+L CPN  ++ +DEIEHF  HWMRGEP+IVR VL+KTSG+SWE
Sbjct: 434 QNSEMRKAAFRKHGHDNFLFCPNAVNITDDEIEHFQRHWMRGEPVIVRNVLDKTSGLSWE 493

Query: 946 PMVKWRAFRE 975
           PMV WRAFRE
Sbjct: 494 PMVMWRAFRE 503



 Score = 69.3 bits (168), Expect(3) = 2e-52
 Identities = 43/114 (37%), Positives = 52/114 (45%)
 Frame = +3

Query: 258 NNCNTSIFNFRNTSIFNFHSWPNPDCPYDXXXXXXXXXXXXXQRGGNEAYSSQRQYVERA 437
           +NCNTSI +F         S PNPDC YD             Q GG+EA +S +Q+VERA
Sbjct: 289 DNCNTSIVDFH-------RSCPNPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERA 341

Query: 438 RSQDTDGKGATTASRKRSGW*GAQSAEGSLTDVVGRFPDWRTNIDCSIRCTPKE 599
                                G  +A+ S  DV  +FPDWR   D SI C PKE
Sbjct: 342 H--------------------GQLAADDSKADVSNQFPDWRATGDGSIPCPPKE 375



 Score = 45.8 bits (107), Expect(3) = 2e-52
 Identities = 19/25 (76%), Positives = 21/25 (84%)
 Frame = +2

Query: 971  ERGSKGNLKEETRSVKAIDCLDWCE 1045
            E G+K   KEETR+VKAIDCLDWCE
Sbjct: 503  ETGAKTKFKEETRTVKAIDCLDWCE 527


>emb|CAN75139.1| hypothetical protein VITISV_040756 [Vitis vinifera]
          Length = 2281

 Score =  140 bits (352), Expect(3) = 1e-46
 Identities = 71/126 (56%), Positives = 87/126 (69%), Gaps = 2/126 (1%)
 Frame = +1

Query: 601  GGCGSKILELRRILRANWASNLRNSAEKLTSNSQFQNVDSPIGYSSCIPFVRKVF--KNP 774
            GGCG++ LELRRI   NW  +L  SAE LT N    ++D   G S C+P        K+ 
Sbjct: 1278 GGCGTETLELRRIFEPNWVDHLIKSAEDLTMNFGSPDIDFSQGCSLCLPTASTGSGEKHC 1337

Query: 775  GVRRAAFQSDSKDNYLCCPNVFDLRNDEIEHF*MHWMRGEPIIVRRVLEKTSGVSWEPMV 954
             VRRAAF+ +S D++L CPN   L ++EIEHF MHWMRGEP+IVR VLEKTSG+SW+PMV
Sbjct: 1338 EVRRAAFRENSHDDFLYCPNSACLGDNEIEHFQMHWMRGEPVIVRNVLEKTSGLSWDPMV 1397

Query: 955  KWRAFR 972
             WRAFR
Sbjct: 1398 MWRAFR 1403



 Score = 56.2 bits (134), Expect(3) = 1e-46
 Identities = 32/69 (46%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
 Frame = +3

Query: 396  NEAYSSQRQYVERARSQDTDGKGATTASRKRSGW--*GAQSAEGSLTDVVGRFPDWRTNI 569
            NEA SS +Q+VER   Q T+ KG   A  +R GW   GA        D    FPDWR N+
Sbjct: 1208 NEAESSHQQFVERVNGQGTEVKGRIPAHDERYGWESDGAHPTNNYAADTCD-FPDWRVNM 1266

Query: 570  DCSIRCTPK 596
            D SI C PK
Sbjct: 1267 DGSIPCPPK 1275



 Score = 38.1 bits (87), Expect(3) = 1e-46
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +2

Query: 974  RGSKGNLKEETRSVKAIDCLDWCE 1045
            RG+   LKE+  SVKAIDC DWCE
Sbjct: 1403 RGATKVLKEDALSVKAIDCFDWCE 1426


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