BLASTX nr result
ID: Coptis25_contig00022875
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00022875
(1045 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera] 139 4e-58
ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258... 139 4e-58
ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247... 140 7e-55
emb|CBI40561.3| unnamed protein product [Vitis vinifera] 139 2e-52
emb|CAN75139.1| hypothetical protein VITISV_040756 [Vitis vinifera] 140 1e-46
>emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]
Length = 1160
Score = 139 bits (349), Expect(3) = 4e-58
Identities = 69/130 (53%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
Frame = +1
Query: 592 QKSGGCGSKILELRRILRANWASNLRNSAEKLTSNSQFQNVDSPIGYSSCIPFV--RKVF 765
++ GGCG+ ILELRR +ANW L S+E L + Q + + G S C P V R
Sbjct: 420 KERGGCGTAILELRRNFKANWVMKLIQSSEDLICHYQLPDHNFSQGCSLCWPNVTGRNSE 479
Query: 766 KNPGVRRAAFQSDSKDNYLCCPNVFDLRNDEIEHF*MHWMRGEPIIVRRVLEKTSGVSWE 945
+N +R+AAF+ DN+L CPN ++ +DEIEHF HWMRGEP+IVR VL+KTSG+SWE
Sbjct: 480 QNSEMRKAAFRKHGHDNFLYCPNAVNITDDEIEHFQRHWMRGEPVIVRNVLDKTSGLSWE 539
Query: 946 PMVKWRAFRE 975
PMV WRAFRE
Sbjct: 540 PMVMWRAFRE 549
Score = 88.6 bits (218), Expect(3) = 4e-58
Identities = 51/116 (43%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Frame = +3
Query: 258 NNCNTSIFNFRNTSIFNFHSWPNPDCPYDXXXXXXXXXXXXXQRGGNEAYSSQRQYVERA 437
+NCNTSI +F S PNPDC YD Q GG+EA +S +Q+VERA
Sbjct: 313 DNCNTSIVDFH-------RSCPNPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERA 365
Query: 438 RSQDTDGKGATTASRKRSGW*G--AQSAEGSLTDVVGRFPDWRTNIDCSIRCTPKE 599
Q DGK T RKR+G +A+ S DV +FPDWR D SI C PKE
Sbjct: 366 HGQVADGKSKATTKRKRNGRVSEVELAADDSKADVSNQFPDWRATGDGSIPCPPKE 421
Score = 45.8 bits (107), Expect(3) = 4e-58
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +2
Query: 971 ERGSKGNLKEETRSVKAIDCLDWCE 1045
E G+K KEETR+VKAIDCLDWCE
Sbjct: 549 ETGAKTKFKEETRTVKAIDCLDWCE 573
>ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258626 [Vitis vinifera]
Length = 1035
Score = 139 bits (349), Expect(3) = 4e-58
Identities = 69/130 (53%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
Frame = +1
Query: 592 QKSGGCGSKILELRRILRANWASNLRNSAEKLTSNSQFQNVDSPIGYSSCIPFV--RKVF 765
++ GGCG+ ILELRR +ANW L S+E L + Q + + G S C P V R
Sbjct: 420 KERGGCGTAILELRRNFKANWVMKLIQSSEDLICHYQLPDHNFSQGCSLCWPNVTGRNSE 479
Query: 766 KNPGVRRAAFQSDSKDNYLCCPNVFDLRNDEIEHF*MHWMRGEPIIVRRVLEKTSGVSWE 945
+N +R+AAF+ DN+L CPN ++ +DEIEHF HWMRGEP+IVR VL+KTSG+SWE
Sbjct: 480 QNSEMRKAAFRKHGHDNFLFCPNAVNITDDEIEHFQRHWMRGEPVIVRNVLDKTSGLSWE 539
Query: 946 PMVKWRAFRE 975
PMV WRAFRE
Sbjct: 540 PMVMWRAFRE 549
Score = 88.6 bits (218), Expect(3) = 4e-58
Identities = 51/116 (43%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Frame = +3
Query: 258 NNCNTSIFNFRNTSIFNFHSWPNPDCPYDXXXXXXXXXXXXXQRGGNEAYSSQRQYVERA 437
+NCNTSI +F S PNPDC YD Q GG+EA +S +Q+VERA
Sbjct: 313 DNCNTSIVDFH-------RSCPNPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERA 365
Query: 438 RSQDTDGKGATTASRKRSGW*G--AQSAEGSLTDVVGRFPDWRTNIDCSIRCTPKE 599
Q DGK T RKR+G +A+ S DV +FPDWR D SI C PKE
Sbjct: 366 HGQVADGKSKATTKRKRNGRVSEVELAADDSKADVSNQFPDWRATGDGSIPCPPKE 421
Score = 45.8 bits (107), Expect(3) = 4e-58
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +2
Query: 971 ERGSKGNLKEETRSVKAIDCLDWCE 1045
E G+K KEETR+VKAIDCLDWCE
Sbjct: 549 ETGAKTKFKEETRTVKAIDCLDWCE 573
>ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247074 [Vitis vinifera]
Length = 1876
Score = 140 bits (352), Expect(3) = 7e-55
Identities = 71/126 (56%), Positives = 87/126 (69%), Gaps = 2/126 (1%)
Frame = +1
Query: 601 GGCGSKILELRRILRANWASNLRNSAEKLTSNSQFQNVDSPIGYSSCIPFVRKVF--KNP 774
GGCG++ LELRRI NW +L SAE LT N ++D G S C+P K+
Sbjct: 1314 GGCGTETLELRRIFEPNWVDHLIKSAEDLTMNFGSPDIDFSQGCSLCLPTASTGSGEKHC 1373
Query: 775 GVRRAAFQSDSKDNYLCCPNVFDLRNDEIEHF*MHWMRGEPIIVRRVLEKTSGVSWEPMV 954
VRRAAF+ +S D++L CPN L ++EIEHF MHWMRGEP+IVR VLEKTSG+SW+PMV
Sbjct: 1374 EVRRAAFRENSHDDFLYCPNSACLGDNEIEHFQMHWMRGEPVIVRNVLEKTSGLSWDPMV 1433
Query: 955 KWRAFR 972
WRAFR
Sbjct: 1434 MWRAFR 1439
Score = 84.3 bits (207), Expect(3) = 7e-55
Identities = 50/115 (43%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Frame = +3
Query: 258 NNCNTSIFNFRNTSIFNFHSWPNPDCPYDXXXXXXXXXXXXXQRGGNEAYSSQRQYVERA 437
+NCNTSI N S PNPDC YD Q GGNEA SS +Q+VER
Sbjct: 1205 DNCNTSIVNLHR-------SCPNPDCSYDLCLTCCRELRKGLQPGGNEAESSHQQFVERV 1257
Query: 438 RSQDTDGKGATTASRKRSGW--*GAQSAEGSLTDVVGRFPDWRTNIDCSIRCTPK 596
Q T+ KG A +R GW GA D FPDWR N+D SI C PK
Sbjct: 1258 NGQGTEVKGRIPAHDERYGWESDGAHPTNNYAADTCD-FPDWRVNMDGSIPCPPK 1311
Score = 38.1 bits (87), Expect(3) = 7e-55
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +2
Query: 974 RGSKGNLKEETRSVKAIDCLDWCE 1045
RG+ LKE+ SVKAIDC DWCE
Sbjct: 1439 RGATKVLKEDALSVKAIDCFDWCE 1462
>emb|CBI40561.3| unnamed protein product [Vitis vinifera]
Length = 897
Score = 139 bits (349), Expect(3) = 2e-52
Identities = 69/130 (53%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
Frame = +1
Query: 592 QKSGGCGSKILELRRILRANWASNLRNSAEKLTSNSQFQNVDSPIGYSSCIPFV--RKVF 765
++ GGCG+ ILELRR +ANW L S+E L + Q + + G S C P V R
Sbjct: 374 KERGGCGTAILELRRNFKANWVMKLIQSSEDLICHYQLPDHNFSQGCSLCWPNVTGRNSE 433
Query: 766 KNPGVRRAAFQSDSKDNYLCCPNVFDLRNDEIEHF*MHWMRGEPIIVRRVLEKTSGVSWE 945
+N +R+AAF+ DN+L CPN ++ +DEIEHF HWMRGEP+IVR VL+KTSG+SWE
Sbjct: 434 QNSEMRKAAFRKHGHDNFLFCPNAVNITDDEIEHFQRHWMRGEPVIVRNVLDKTSGLSWE 493
Query: 946 PMVKWRAFRE 975
PMV WRAFRE
Sbjct: 494 PMVMWRAFRE 503
Score = 69.3 bits (168), Expect(3) = 2e-52
Identities = 43/114 (37%), Positives = 52/114 (45%)
Frame = +3
Query: 258 NNCNTSIFNFRNTSIFNFHSWPNPDCPYDXXXXXXXXXXXXXQRGGNEAYSSQRQYVERA 437
+NCNTSI +F S PNPDC YD Q GG+EA +S +Q+VERA
Sbjct: 289 DNCNTSIVDFH-------RSCPNPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERA 341
Query: 438 RSQDTDGKGATTASRKRSGW*GAQSAEGSLTDVVGRFPDWRTNIDCSIRCTPKE 599
G +A+ S DV +FPDWR D SI C PKE
Sbjct: 342 H--------------------GQLAADDSKADVSNQFPDWRATGDGSIPCPPKE 375
Score = 45.8 bits (107), Expect(3) = 2e-52
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +2
Query: 971 ERGSKGNLKEETRSVKAIDCLDWCE 1045
E G+K KEETR+VKAIDCLDWCE
Sbjct: 503 ETGAKTKFKEETRTVKAIDCLDWCE 527
>emb|CAN75139.1| hypothetical protein VITISV_040756 [Vitis vinifera]
Length = 2281
Score = 140 bits (352), Expect(3) = 1e-46
Identities = 71/126 (56%), Positives = 87/126 (69%), Gaps = 2/126 (1%)
Frame = +1
Query: 601 GGCGSKILELRRILRANWASNLRNSAEKLTSNSQFQNVDSPIGYSSCIPFVRKVF--KNP 774
GGCG++ LELRRI NW +L SAE LT N ++D G S C+P K+
Sbjct: 1278 GGCGTETLELRRIFEPNWVDHLIKSAEDLTMNFGSPDIDFSQGCSLCLPTASTGSGEKHC 1337
Query: 775 GVRRAAFQSDSKDNYLCCPNVFDLRNDEIEHF*MHWMRGEPIIVRRVLEKTSGVSWEPMV 954
VRRAAF+ +S D++L CPN L ++EIEHF MHWMRGEP+IVR VLEKTSG+SW+PMV
Sbjct: 1338 EVRRAAFRENSHDDFLYCPNSACLGDNEIEHFQMHWMRGEPVIVRNVLEKTSGLSWDPMV 1397
Query: 955 KWRAFR 972
WRAFR
Sbjct: 1398 MWRAFR 1403
Score = 56.2 bits (134), Expect(3) = 1e-46
Identities = 32/69 (46%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +3
Query: 396 NEAYSSQRQYVERARSQDTDGKGATTASRKRSGW--*GAQSAEGSLTDVVGRFPDWRTNI 569
NEA SS +Q+VER Q T+ KG A +R GW GA D FPDWR N+
Sbjct: 1208 NEAESSHQQFVERVNGQGTEVKGRIPAHDERYGWESDGAHPTNNYAADTCD-FPDWRVNM 1266
Query: 570 DCSIRCTPK 596
D SI C PK
Sbjct: 1267 DGSIPCPPK 1275
Score = 38.1 bits (87), Expect(3) = 1e-46
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +2
Query: 974 RGSKGNLKEETRSVKAIDCLDWCE 1045
RG+ LKE+ SVKAIDC DWCE
Sbjct: 1403 RGATKVLKEDALSVKAIDCFDWCE 1426