BLASTX nr result

ID: Coptis25_contig00022869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022869
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20108.3| unnamed protein product [Vitis vinifera]              204   2e-50
emb|CAN60218.1| hypothetical protein VITISV_006612 [Vitis vinifera]   204   2e-50
gb|AAG52564.1|AC010675_12 unknown protein; 6859-4829 [Arabidopsi...   192   1e-46
ref|XP_002331299.1| predicted protein [Populus trichocarpa] gi|2...   189   1e-45
dbj|BAB02646.1| Ac transposase-like protein [Arabidopsis thalian...   170   5e-40

>emb|CBI20108.3| unnamed protein product [Vitis vinifera]
          Length = 677

 Score =  204 bits (520), Expect = 2e-50
 Identities = 104/204 (50%), Positives = 142/204 (69%), Gaps = 17/204 (8%)
 Frame = +2

Query: 323 IVWNDFERVKKGDVMVAICKHCNKELSASATSGTSHLKNHLTRCRKRANRELTQKLLLVR 502
           +VWN FERV+K D+  A+C HCNK LS S+ SGT+HL+NHL RC KR+N +++Q LL  +
Sbjct: 18  VVWNHFERVRKADICYAVCIHCNKRLSGSSNSGTTHLRNHLMRCLKRSNYDVSQ-LLAAK 76

Query: 503 GKQRDGAIKF-----------EQDYGPLDFKFDQEQ------NLLRLKFDQDRSRCDLAR 631
            ++++GA+             E++  P   KFDQEQ      NL  ++FDQ+RSR DLAR
Sbjct: 77  RRKKEGALSLTAINYDEGQRKEENIKPTILKFDQEQKKDEPINLGSIRFDQERSRLDLAR 136

Query: 632 MIIVHEYPLSMVEHAGFRRFVTNLQPLFQPMSCEAVKSDCVQIYGKEKQKVYEMLDKVPG 811
           MII+H YPL+MV H GF+ FV +LQPLF+  S  A++ DC++IYGKEKQKVYE++ +  G
Sbjct: 137 MIILHGYPLAMVNHVGFKVFVKDLQPLFEVNS--AIELDCMEIYGKEKQKVYEVMSRSHG 194

Query: 812 RISLTADLCTSYQDNGYMCLTAHY 883
           RI+L  D+ TS +   Y+CLTAHY
Sbjct: 195 RINLAVDMWTSPEQAEYLCLTAHY 218


>emb|CAN60218.1| hypothetical protein VITISV_006612 [Vitis vinifera]
          Length = 667

 Score =  204 bits (520), Expect = 2e-50
 Identities = 104/204 (50%), Positives = 142/204 (69%), Gaps = 17/204 (8%)
 Frame = +2

Query: 323 IVWNDFERVKKGDVMVAICKHCNKELSASATSGTSHLKNHLTRCRKRANRELTQKLLLVR 502
           +VWN FERV+K D+  A+C HCNK LS S+ SGT+HL+NHL RC KR+N +++Q LL  +
Sbjct: 18  VVWNHFERVRKADICYAVCIHCNKRLSGSSNSGTTHLRNHLMRCLKRSNYDVSQ-LLAAK 76

Query: 503 GKQRDGAIKF-----------EQDYGPLDFKFDQEQ------NLLRLKFDQDRSRCDLAR 631
            ++++GA+             E++  P   KFDQEQ      NL  ++FDQ+RSR DLAR
Sbjct: 77  RRKKEGALSLTAINYDEGQRKEENIKPTILKFDQEQKKDEPINLGSIRFDQERSRLDLAR 136

Query: 632 MIIVHEYPLSMVEHAGFRRFVTNLQPLFQPMSCEAVKSDCVQIYGKEKQKVYEMLDKVPG 811
           MII+H YPL+MV H GF+ FV +LQPLF+  S  A++ DC++IYGKEKQKVYE++ +  G
Sbjct: 137 MIILHGYPLAMVNHVGFKVFVKDLQPLFEVNS--AIELDCMEIYGKEKQKVYEVMSRSHG 194

Query: 812 RISLTADLCTSYQDNGYMCLTAHY 883
           RI+L  D+ TS +   Y+CLTAHY
Sbjct: 195 RINLAVDMWTSPEQAEYLCLTAHY 218


>gb|AAG52564.1|AC010675_12 unknown protein; 6859-4829 [Arabidopsis thaliana]
          Length = 676

 Score =  192 bits (487), Expect = 1e-46
 Identities = 96/198 (48%), Positives = 138/198 (69%), Gaps = 11/198 (5%)
 Frame = +2

Query: 323 IVWNDFERVKKGDVMVAICKHCNKELSASATSGTSHLKNHLTRCRKRANRELTQKL-LLV 499
           +VWNDF+RV+KG+  +AIC+HC K LS S+ SGTSHL+NHL RCR+R N          V
Sbjct: 30  VVWNDFDRVRKGETYIAICRHCKKRLSGSSASGTSHLRNHLIRCRRRTNGNNNGVAQYFV 89

Query: 500 RGKQRDGA---IKFEQDYGPLDFKFDQEQ------NLLRLKFDQDRSRCDLARMIIVHEY 652
           +GK+++ A   IK E+    ++ +++ E+      N++ +  DQ R R DLARMII+H Y
Sbjct: 90  KGKKKELANERIKDEEVLSVVNVRYEHEKEEHEDVNVVSMGLDQRRCRFDLARMIILHGY 149

Query: 653 PLSMVEHAGFRRFVTNLQPLFQPMSCEAVKSDCVQIYGKEKQKVYEMLDKVPGRISLTAD 832
           PLSMVE  GFR F+ NLQPLF+ ++ E V+SDC++IY KEK K++E LDK+PG+IS++ D
Sbjct: 150 PLSMVEDVGFRMFIGNLQPLFELVAFERVESDCMEIYAKEKHKIFEALDKLPGKISISVD 209

Query: 833 LCTSYQDNG-YMCLTAHY 883
           + +   D+  ++CL AHY
Sbjct: 210 VWSGSGDSDEFLCLAAHY 227


>ref|XP_002331299.1| predicted protein [Populus trichocarpa] gi|222873882|gb|EEF11013.1|
           predicted protein [Populus trichocarpa]
          Length = 662

 Score =  189 bits (479), Expect = 1e-45
 Identities = 94/206 (45%), Positives = 140/206 (67%), Gaps = 19/206 (9%)
 Frame = +2

Query: 323 IVWNDFERVKKGDVMVAICKHCNKELSASATSGTSHLKNHLTRCRKRANRELTQKLLLVR 502
           +VWN F+R++K DV  A+C HC+K+LS S+ SGT+HL+NHL RC KR+N +++Q LL  +
Sbjct: 18  VVWNHFQRIRKADVCYAVCVHCDKKLSGSSNSGTTHLRNHLMRCLKRSNYDVSQ-LLAAK 76

Query: 503 GKQRDGAIKF-------------EQDYGPLDFKFDQEQ------NLLRLKFDQDRSRCDL 625
            K++D ++               ++   P   KFD EQ      +L   +FDQ++SR DL
Sbjct: 77  KKKKDTSLSIANVNANYDETQRKDEYIKPTIIKFDHEQRKDEIISLGSCRFDQEQSRLDL 136

Query: 626 ARMIIVHEYPLSMVEHAGFRRFVTNLQPLFQPMSCEAVKSDCVQIYGKEKQKVYEMLDKV 805
           ARMII+H YPL+MVEH GF+ FV NLQPLF+ +   +++  C++IY KEKQKVYEM++++
Sbjct: 137 ARMIILHGYPLTMVEHVGFKIFVKNLQPLFEFVPNSSIEVSCIEIYMKEKQKVYEMINRL 196

Query: 806 PGRISLTADLCTSYQDNGYMCLTAHY 883
            GRI+L  ++ +S ++  Y+CL AHY
Sbjct: 197 HGRINLAVEMWSSPENAEYLCLIAHY 222


>dbj|BAB02646.1| Ac transposase-like protein [Arabidopsis thaliana]
           gi|18176330|gb|AAL60024.1| unknown protein [Arabidopsis
           thaliana] gi|20465375|gb|AAM20091.1| unknown protein
           [Arabidopsis thaliana]
          Length = 662

 Score =  170 bits (430), Expect = 5e-40
 Identities = 84/202 (41%), Positives = 130/202 (64%), Gaps = 15/202 (7%)
 Frame = +2

Query: 323 IVWNDFERVKKGDVMVAICKHCNKELSASATSGTSHLKNHLTRCRKRANRELTQKLLLVR 502
           +VWN FERV+K DV  A+C  CNK+LS S+ SGT+HL+NHL RC KR N +++Q L   R
Sbjct: 19  VVWNYFERVRKADVCYAVCIQCNKKLSGSSNSGTTHLRNHLMRCLKRTNHDMSQLLTPKR 78

Query: 503 GKQRD----GAIKFEQDYGPLDF---KFDQEQNLLRL--------KFDQDRSRCDLARMI 637
            K+ +      I F+      ++   KFDQ+Q    +        +F Q+RS+ DLARMI
Sbjct: 79  RKKENPVTVATINFDDGQAKEEYLRPKFDQDQRRDEVVLSRGSGGRFSQERSQVDLARMI 138

Query: 638 IVHEYPLSMVEHAGFRRFVTNLQPLFQPMSCEAVKSDCVQIYGKEKQKVYEMLDKVPGRI 817
           I+H YPL+MV+H GF+ F  NLQPLF+ +    ++  C++IY +EKQ+V   L+ + G++
Sbjct: 139 ILHNYPLAMVDHVGFKVFARNLQPLFEAVPNSTIEDSCMEIYIREKQRVQHTLNHLYGKV 198

Query: 818 SLTADLCTSYQDNGYMCLTAHY 883
           +L+ ++ +S  ++ Y+CL ++Y
Sbjct: 199 NLSVEMWSSRDNSNYVCLASNY 220


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