BLASTX nr result

ID: Coptis25_contig00022867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022867
         (1119 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276406.1| PREDICTED: rubredoxin-like [Vitis vinifera]       217   4e-54
emb|CAN65205.1| hypothetical protein VITISV_016717 [Vitis vinifera]   215   1e-53
gb|ADN33910.1| rubredoxin [Cucumis melo subsp. melo]                  215   2e-53
ref|XP_002512251.1| Rubredoxin, putative [Ricinus communis] gi|2...   211   2e-52
ref|XP_004156449.1| PREDICTED: rubredoxin-like [Cucumis sativus]      209   8e-52

>ref|XP_002276406.1| PREDICTED: rubredoxin-like [Vitis vinifera]
          Length = 200

 Score =  217 bits (553), Expect = 4e-54
 Identities = 109/169 (64%), Positives = 122/169 (72%)
 Frame = -2

Query: 644 FTSNSTDVSKQDIPIXXXXXXXXXXXXXXXXXXXXXXXXXXPSEPLSSFTDNIEEKFDKR 465
           F+S S DVSK+D P                            S P S       E FDKR
Sbjct: 53  FSSRSVDVSKEDKPTSEQPDS---------------------STPTSDSPPQEPENFDKR 91

Query: 464 RLEERFAVLNTGIHECRSCGYRYNEAAGDPSYPVPPGLPFNKLPEDWRCPTCGAAQSFFE 285
           RLEE+FAVLNTGI+ECRSCGY+Y+EAAGDPSYP+PPGL F+KLP+DWRCPTCGAA+SFFE
Sbjct: 92  RLEEKFAVLNTGIYECRSCGYKYDEAAGDPSYPIPPGLQFDKLPDDWRCPTCGAARSFFE 151

Query: 284 SKSVEIAGFAENQQFGLGANTLTGGQKLILIYGTLGLFFVLFLSGYFLQ 138
           SKSVEIAGFA+NQQFGLG NTLT GQK +LIYG+L  FFVLFLSGYFLQ
Sbjct: 152 SKSVEIAGFAQNQQFGLGGNTLTSGQKAVLIYGSLLFFFVLFLSGYFLQ 200


>emb|CAN65205.1| hypothetical protein VITISV_016717 [Vitis vinifera]
          Length = 167

 Score =  215 bits (548), Expect = 1e-53
 Identities = 109/169 (64%), Positives = 122/169 (72%)
 Frame = -2

Query: 644 FTSNSTDVSKQDIPIXXXXXXXXXXXXXXXXXXXXXXXXXXPSEPLSSFTDNIEEKFDKR 465
           F+S S DVSK+D P                           P EP         E FDKR
Sbjct: 20  FSSRSVDVSKEDKPTSEQPDSSTPTLDSP------------PQEP---------ENFDKR 58

Query: 464 RLEERFAVLNTGIHECRSCGYRYNEAAGDPSYPVPPGLPFNKLPEDWRCPTCGAAQSFFE 285
           RLEE+FAVLNTGI+ECRSCGY+Y+EAAGDPSYP+PPGL F+KLP+DWRCPTCGAA+SFFE
Sbjct: 59  RLEEKFAVLNTGIYECRSCGYKYDEAAGDPSYPIPPGLQFDKLPDDWRCPTCGAARSFFE 118

Query: 284 SKSVEIAGFAENQQFGLGANTLTGGQKLILIYGTLGLFFVLFLSGYFLQ 138
           SKSVEIAGFA+NQQFGLG NTLT GQK +LIYG+L  FFVLFLSGYFLQ
Sbjct: 119 SKSVEIAGFAQNQQFGLGGNTLTSGQKAVLIYGSLLFFFVLFLSGYFLQ 167


>gb|ADN33910.1| rubredoxin [Cucumis melo subsp. melo]
          Length = 198

 Score =  215 bits (547), Expect = 2e-53
 Identities = 107/169 (63%), Positives = 122/169 (72%)
 Frame = -2

Query: 644 FTSNSTDVSKQDIPIXXXXXXXXXXXXXXXXXXXXXXXXXXPSEPLSSFTDNIEEKFDKR 465
           FT NS DVSK+D P                           PS P     +  EEKFDKR
Sbjct: 50  FTLNSIDVSKEDKPTSDDPNT--------------------PSPPPVVAVEKEEEKFDKR 89

Query: 464 RLEERFAVLNTGIHECRSCGYRYNEAAGDPSYPVPPGLPFNKLPEDWRCPTCGAAQSFFE 285
           RLEERFAVLNTGI+ECRSCG++++EA GDP+YP+ PGLPF +LPEDWRCPTCGAA+SFFE
Sbjct: 90  RLEERFAVLNTGIYECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFE 149

Query: 284 SKSVEIAGFAENQQFGLGANTLTGGQKLILIYGTLGLFFVLFLSGYFLQ 138
           SKSVEIAGFA+NQQ+GLG NTLT GQK +LIYG+L  FF LFLSGYFLQ
Sbjct: 150 SKSVEIAGFAQNQQYGLGGNTLTSGQKAVLIYGSLLFFFALFLSGYFLQ 198


>ref|XP_002512251.1| Rubredoxin, putative [Ricinus communis] gi|223548212|gb|EEF49703.1|
           Rubredoxin, putative [Ricinus communis]
          Length = 195

 Score =  211 bits (538), Expect = 2e-52
 Identities = 98/129 (75%), Positives = 112/129 (86%), Gaps = 1/129 (0%)
 Frame = -2

Query: 521 PSEPLSSFTD-NIEEKFDKRRLEERFAVLNTGIHECRSCGYRYNEAAGDPSYPVPPGLPF 345
           P  PL S T+   E +FD+RRLEE+FAVLNTGI+ECRSCGY+Y+E  GDP+YP+PPG  F
Sbjct: 67  PPPPLESLTEAETETEFDQRRLEEKFAVLNTGIYECRSCGYKYDEGVGDPTYPIPPGFQF 126

Query: 344 NKLPEDWRCPTCGAAQSFFESKSVEIAGFAENQQFGLGANTLTGGQKLILIYGTLGLFFV 165
           +KLP+DWRCPTCGAA+SFFESKSVEIAGFA+NQQFGLG N+LT GQK ILIYGTL  FFV
Sbjct: 127 DKLPDDWRCPTCGAAKSFFESKSVEIAGFAQNQQFGLGGNSLTSGQKTILIYGTLFFFFV 186

Query: 164 LFLSGYFLQ 138
           LFLSGYFLQ
Sbjct: 187 LFLSGYFLQ 195


>ref|XP_004156449.1| PREDICTED: rubredoxin-like [Cucumis sativus]
          Length = 201

 Score =  209 bits (533), Expect = 8e-52
 Identities = 105/172 (61%), Positives = 123/172 (71%), Gaps = 3/172 (1%)
 Frame = -2

Query: 644 FTSNSTDVSKQDIPIXXXXXXXXXXXXXXXXXXXXXXXXXXPSEPLS---SFTDNIEEKF 474
           FT NS DVSK+D P                           P+ P+       +  EEKF
Sbjct: 53  FTLNSIDVSKEDKP-----------------------TSDDPNTPVPLPVVAVEEEEEKF 89

Query: 473 DKRRLEERFAVLNTGIHECRSCGYRYNEAAGDPSYPVPPGLPFNKLPEDWRCPTCGAAQS 294
           DKRRLEE+FAVLNTGI+ECRSCG++++EA GDP+YP+ PGLPF +LPEDWRCPTCGAA+S
Sbjct: 90  DKRRLEEKFAVLNTGIYECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKS 149

Query: 293 FFESKSVEIAGFAENQQFGLGANTLTGGQKLILIYGTLGLFFVLFLSGYFLQ 138
           FFESKSVEIAGFA+NQQ+GLG NTLT GQK +LIYG+L  FF LFLSGYFLQ
Sbjct: 150 FFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLIYGSLFFFFALFLSGYFLQ 201


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