BLASTX nr result

ID: Coptis25_contig00022855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022855
         (885 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q04654.1|ATP6_VICFA RecName: Full=ATP synthase subunit a; Alt...    44   6e-06
gb|AAR16718.2| ATPase subunit 6 [Pisum sativum]                        44   6e-06
gb|ACD02191.1| ATPase subunit 6 [Sarracenia purpurea]                  44   6e-06
gb|ACD02180.1| ATPase subunit 6 [Osmorhiza longistylis]                44   6e-06

>sp|Q04654.1|ATP6_VICFA RecName: Full=ATP synthase subunit a; AltName: Full=F-ATPase
           protein 6 gi|14119|emb|CAA38183.1| mitochondrial ATPase
           F(0) complex, subunit 6 [Vicia faba]
          Length = 291

 Score = 44.3 bits (103), Expect(2) = 6e-06
 Identities = 19/26 (73%), Positives = 22/26 (84%)
 Frame = -3

Query: 508 LASPELGITMSHAHVSTISICIYLNE 431
           L  PELG+ +S AHVSTISICIYLN+
Sbjct: 252 LTGPELGVAISQAHVSTISICIYLND 277



 Score = 32.3 bits (72), Expect(2) = 6e-06
 Identities = 13/16 (81%), Positives = 16/16 (100%)
 Frame = -1

Query: 552 LYFIGDIGPLFILLSL 505
           LYFIGD+GPLFI+L+L
Sbjct: 237 LYFIGDLGPLFIVLAL 252


>gb|AAR16718.2| ATPase subunit 6 [Pisum sativum]
          Length = 279

 Score = 44.3 bits (103), Expect(2) = 6e-06
 Identities = 19/26 (73%), Positives = 22/26 (84%)
 Frame = -3

Query: 508 LASPELGITMSHAHVSTISICIYLNE 431
           L  PELG+ +S AHVSTISICIYLN+
Sbjct: 248 LTGPELGVAISQAHVSTISICIYLND 273



 Score = 32.3 bits (72), Expect(2) = 6e-06
 Identities = 13/16 (81%), Positives = 16/16 (100%)
 Frame = -1

Query: 552 LYFIGDIGPLFILLSL 505
           LYFIGD+GPLFI+L+L
Sbjct: 233 LYFIGDLGPLFIVLAL 248


>gb|ACD02191.1| ATPase subunit 6 [Sarracenia purpurea]
          Length = 222

 Score = 44.3 bits (103), Expect(2) = 6e-06
 Identities = 19/26 (73%), Positives = 22/26 (84%)
 Frame = -3

Query: 508 LASPELGITMSHAHVSTISICIYLNE 431
           L  PELG+ +S AHVSTISICIYLN+
Sbjct: 193 LTGPELGVAISQAHVSTISICIYLND 218



 Score = 32.3 bits (72), Expect(2) = 6e-06
 Identities = 13/16 (81%), Positives = 16/16 (100%)
 Frame = -1

Query: 552 LYFIGDIGPLFILLSL 505
           LYFIGD+GPLFI+L+L
Sbjct: 178 LYFIGDLGPLFIVLAL 193


>gb|ACD02180.1| ATPase subunit 6 [Osmorhiza longistylis]
          Length = 220

 Score = 44.3 bits (103), Expect(2) = 6e-06
 Identities = 19/26 (73%), Positives = 22/26 (84%)
 Frame = -3

Query: 508 LASPELGITMSHAHVSTISICIYLNE 431
           L  PELG+ +S AHVSTISICIYLN+
Sbjct: 191 LTGPELGVAISQAHVSTISICIYLND 216



 Score = 32.3 bits (72), Expect(2) = 6e-06
 Identities = 13/16 (81%), Positives = 16/16 (100%)
 Frame = -1

Query: 552 LYFIGDIGPLFILLSL 505
           LYFIGD+GPLFI+L+L
Sbjct: 176 LYFIGDLGPLFIVLAL 191


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