BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022847
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    55   2e-06

>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 54.7 bits (130), Expect(2) = 2e-06
 Identities = 32/88 (36%), Positives = 48/88 (54%)
 Frame = -2

Query: 286  TESEVLRSWGVEGRTAAIQRIKECCWSLPVSPIVKINTDGASFGNPGVASVGAEFRDSLG 107
            ++S +L  + V  R    + I    W  P  P++K+NTDG+  G  G+A+ G  FRDS G
Sbjct: 990  SDSAILEEFSVSPRHRKYKDIILVLWKNPSPPLLKVNTDGSVVG--GLAACGGLFRDSSG 1047

Query: 106  IFLLVYCRKIGVTANFVAECTAILEAME 23
             FL  +   IG+ + F AE  A + A+E
Sbjct: 1048 SFLGAFSCNIGLASVFHAETLAFILALE 1075



 Score = 21.9 bits (45), Expect(2) = 2e-06
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -3

Query: 27   WKSLWVESD 1
            W++LW+ESD
Sbjct: 1082 WRNLWLESD 1090