BLASTX nr result
ID: Coptis25_contig00022840
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00022840
(1366 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group... 210 e-134
emb|CAN79949.1| hypothetical protein VITISV_044422 [Vitis vinifera] 204 e-133
emb|CAN60930.1| hypothetical protein VITISV_012765 [Vitis vinifera] 207 e-131
emb|CAN79930.1| hypothetical protein VITISV_007488 [Vitis vinifera] 202 e-128
emb|CAN69597.1| hypothetical protein VITISV_038518 [Vitis vinifera] 193 e-126
>gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711651|gb|ABF99446.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1393
Score = 210 bits (534), Expect(4) = e-134
Identities = 113/193 (58%), Positives = 135/193 (69%), Gaps = 1/193 (0%)
Frame = -3
Query: 1169 LSEEVSMRLPPGLKLAGSDNCVCKLKKSLYGLKQSPRAWFERFSEVVKKASYSQSQADHT 990
L EEV M +PPG + + VCKLKKSLYGLKQSPRAWF+RF V YSQ DHT
Sbjct: 1002 LHEEVYMEIPPGFGNSQTVGKVCKLKKSLYGLKQSPRAWFDRFRHAVCDMGYSQCNGDHT 1061
Query: 989 LFVRRP*SNITALIVYVDDIVVTGNDPSEITKLKTFLSSHFETKDLGQLKYFLGIEVVRS 810
+F + ++IT L VYVDDIV+TG+D EI LK L FE KDLG L+YFLGIE+ RS
Sbjct: 1062 VFYKHRGTHITILAVYVDDIVITGDDVEEIRCLKERLGKAFEVKDLGPLRYFLGIEIARS 1121
Query: 809 QQGIFISQRKYVLDLLSETE*T-C*IADTPIDQNHRLNHIDGDPIQDTEMFQ*LVGRQIY 633
+GI +SQRKYVLDLL++T C + TPID+NH+L GDP+ D E +Q LVGR IY
Sbjct: 1122 SKGIVLSQRKYVLDLLTDTGMLGCRASTTPIDRNHQLCAQSGDPV-DKEAYQRLVGRLIY 1180
Query: 632 LSHTRPDIAYVVS 594
L HTRPDI+Y VS
Sbjct: 1181 LCHTRPDISYAVS 1193
Score = 169 bits (427), Expect(4) = e-134
Identities = 81/144 (56%), Positives = 109/144 (75%)
Frame = -3
Query: 434 AGSITDRRSTTGYCAFVGGNLISWRSKKQPVVARSSAEAEFRAMAHGVCELLWLRILIGE 255
A S+ DRRST+GYC FVGGNL+SWRSKKQ VVARS+AEAE+RAMA + E+LW+R L+ E
Sbjct: 1244 ASSMDDRRSTSGYCVFVGGNLVSWRSKKQAVVARSTAEAEYRAMALSLSEMLWMRSLLTE 1303
Query: 254 LGIHVQEPMNFYCDNKAAISIAHNPV*HDRTKHIEVDHHFIKE*LQLKVICTPYVSRTDQ 75
L + + + +CDNK+AISIA+NPV HDRTKH+E+D FIKE + V+ Y+ +Q
Sbjct: 1304 LRVLRSDTVMLHCDNKSAISIANNPVQHDRTKHVEIDRFFIKEKIDSGVLRLEYIKSCEQ 1363
Query: 74 VADVLTKGVAKSCLQTVIGKLGLI 3
+AD LTKG+ S +Q++ K+G+I
Sbjct: 1364 LADCLTKGLGPSEIQSICNKMGMI 1387
Score = 107 bits (267), Expect(4) = e-134
Identities = 49/65 (75%), Positives = 56/65 (86%)
Frame = -2
Query: 1365 PDGSVNKYKARLVARGFTQTYGIDYLETFAPVAKMKTVRVLLSLAANMSWPLHQLDVNNA 1186
P+G V++YKARLVA+G++QTYGIDY ETFAPVAKM TVR L+S A N WPLHQLDV NA
Sbjct: 937 PEGKVDRYKARLVAKGYSQTYGIDYDETFAPVAKMGTVRALVSCAVNFGWPLHQLDVKNA 996
Query: 1185 FLHGD 1171
FLHGD
Sbjct: 997 FLHGD 1001
Score = 64.7 bits (156), Expect(4) = e-134
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = -1
Query: 589 VSAISQFMHSP*TPHLEAAQRMLRYLKGSPSRGIQYKKTKHF*VEAYSDADW 434
VS +S++MH P T HL+ ++LRYLKG+P +G+ ++K H VE Y DADW
Sbjct: 1192 VSVVSRYMHDPRTGHLDVVHKILRYLKGTPGKGLWFRKNGHLNVEGYCDADW 1243
>emb|CAN79949.1| hypothetical protein VITISV_044422 [Vitis vinifera]
Length = 1176
Score = 204 bits (520), Expect(4) = e-133
Identities = 112/195 (57%), Positives = 136/195 (69%), Gaps = 3/195 (1%)
Frame = -3
Query: 1169 LSEEVSMRLPPGLKLAGSDNC--VCKLKKSLYGLKQSPRAWFERFSEVVKKASYSQSQAD 996
LSEEV M LPPG + C VCKLKKSLYGLKQSPRAWF RF++ ++ Y QS +D
Sbjct: 782 LSEEVYMDLPPGC-MVSEXQCQKVCKLKKSLYGLKQSPRAWFGRFTKSMRAFGYRQSNSD 840
Query: 995 HTLFVRRP*SNITALIVYVDDIVVTGNDPSEITKLKTFLSSHFETKDLGQLKYFLGIEVV 816
HTLF+++ IT LIVYVDD+VVTGNDP E L+ +LS FE KDLG LKYFLGIEV
Sbjct: 841 HTLFLKKQHGKITXLIVYVDDMVVTGNDPEERKALQNYLSREFEMKDLGPLKYFLGIEVS 900
Query: 815 RSQQGIFISQRKYVLDLLSETE*T-C*IADTPIDQNHRLNHIDGDPIQDTEMFQ*LVGRQ 639
RS +GIF+SQRKY LDLL ET + C +TPI++ +L D +Q LVGR
Sbjct: 901 RSSEGIFLSQRKYXLDLLQETGMSGCQPVNTPIEEGLKLCVEPNQVSTDKGRYQRLVGRL 960
Query: 638 IYLSHTRPDIAYVVS 594
+YL+HTRPD+AY +S
Sbjct: 961 MYLAHTRPDLAYALS 975
Score = 175 bits (443), Expect(4) = e-133
Identities = 83/143 (58%), Positives = 106/143 (74%)
Frame = -3
Query: 434 AGSITDRRSTTGYCAFVGGNLISWRSKKQPVVARSSAEAEFRAMAHGVCELLWLRILIGE 255
AG++ DRRST+GY FVGGNL++W+SKKQ VVARSSAEAEFR M G+CE LWLR+L+ +
Sbjct: 1027 AGAVDDRRSTSGYFTFVGGNLVTWKSKKQNVVARSSAEAEFRGMXLGLCEALWLRLLLQD 1086
Query: 254 LGIHVQEPMNFYCDNKAAISIAHNPV*HDRTKHIEVDHHFIKE*LQLKVICTPYVSRTDQ 75
LG ++P+ +CDNKAA IAHNPV HDRTKH+EVD FIKE L K++ P + DQ
Sbjct: 1087 LGYLSRQPIRLFCDNKAACDIAHNPVQHDRTKHVEVDRFFIKEKLDDKIVELPKIRSEDQ 1146
Query: 74 VADVLTKGVAKSCLQTVIGKLGL 6
+AD+LTK V+ + KLG+
Sbjct: 1147 LADILTKAVSSQVFSKFLBKLGM 1169
Score = 107 bits (268), Expect(4) = e-133
Identities = 48/64 (75%), Positives = 57/64 (89%)
Frame = -2
Query: 1362 DGSVNKYKARLVARGFTQTYGIDYLETFAPVAKMKTVRVLLSLAANMSWPLHQLDVNNAF 1183
DGS+ ++KARLVA+G+TQTYGIDY ETFAPVAK+ T+RVLLSLAAN+ WPL Q DV NAF
Sbjct: 718 DGSIERFKARLVAKGYTQTYGIDYTETFAPVAKINTIRVLLSLAANLDWPLQQFDVKNAF 777
Query: 1182 LHGD 1171
LHG+
Sbjct: 778 LHGE 781
Score = 57.8 bits (138), Expect(4) = e-133
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = -1
Query: 601 LLVQVSAISQFMHSP*TPHLEAAQRMLRYLKGSPSRGIQY-KKTKHF*VEAYSDADW 434
L +S +SQ+MH+P H+ A R+LRYLK +P +GI + K H +E Y+DADW
Sbjct: 970 LAYALSVVSQYMHNPGEQHMNAVMRILRYLKNAPGKGILFAKNVDHQSIEVYTDADW 1026
>emb|CAN60930.1| hypothetical protein VITISV_012765 [Vitis vinifera]
Length = 1201
Score = 207 bits (526), Expect(4) = e-131
Identities = 113/195 (57%), Positives = 137/195 (70%), Gaps = 3/195 (1%)
Frame = -3
Query: 1169 LSEEVSMRLPPGLKLAGSDNC--VCKLKKSLYGLKQSPRAWFERFSEVVKKASYSQSQAD 996
LSEEV M LPPG + C VCKLKKSLYGLKQSPRAWF RF++ ++ Y QS +D
Sbjct: 807 LSEEVYMDLPPGC-MVSEKQCQKVCKLKKSLYGLKQSPRAWFGRFTKSMRAFGYRQSNSD 865
Query: 995 HTLFVRRP*SNITALIVYVDDIVVTGNDPSEITKLKTFLSSHFETKDLGQLKYFLGIEVV 816
HTLF+++ ITALIVYVDD+VVTGNDP E L+ +LS FE KDLG LKYFLGIEV
Sbjct: 866 HTLFLKKQHGKITALIVYVDDMVVTGNDPEERKALQNYLSREFEMKDLGPLKYFLGIEVS 925
Query: 815 RSQQGIFISQRKYVLDLLSETE*T-C*IADTPIDQNHRLNHIDGDPIQDTEMFQ*LVGRQ 639
RS +GIF+SQRKY LDLL ET + C +TPI++ +L D +Q LVGR
Sbjct: 926 RSSEGIFLSQRKYALDLLQETGMSGCQPVNTPIEEGLKLCVEPNQVSTDKGRYQRLVGRL 985
Query: 638 IYLSHTRPDIAYVVS 594
+YL+HTRPD+AY +S
Sbjct: 986 MYLAHTRPDLAYALS 1000
Score = 172 bits (437), Expect(4) = e-131
Identities = 82/142 (57%), Positives = 105/142 (73%)
Frame = -3
Query: 431 GSITDRRSTTGYCAFVGGNLISWRSKKQPVVARSSAEAEFRAMAHGVCELLWLRILIGEL 252
G++ DRRST+GY FVGGNL++W+SKKQ VVARSSAEAEFR MA G+CE LWLR+L+ +L
Sbjct: 1053 GAVDDRRSTSGYFTFVGGNLVTWKSKKQNVVARSSAEAEFRGMALGLCEALWLRLLLXDL 1112
Query: 251 GIHVQEPMNFYCDNKAAISIAHNPV*HDRTKHIEVDHHFIKE*LQLKVICTPYVSRTDQV 72
G ++P+ +CDNKAA IAHN V HDRTKH+EVD FIKE L K++ P + DQ+
Sbjct: 1113 GYLSRQPIRLFCDNKAACDIAHNXVQHDRTKHVEVDRFFIKEKLDDKIVELPKIRSEDQL 1172
Query: 71 ADVLTKGVAKSCLQTVIGKLGL 6
AD+LTK V+ + KLG+
Sbjct: 1173 ADILTKAVSSQVFSKFLDKLGM 1194
Score = 102 bits (253), Expect(4) = e-131
Identities = 46/64 (71%), Positives = 54/64 (84%)
Frame = -2
Query: 1362 DGSVNKYKARLVARGFTQTYGIDYLETFAPVAKMKTVRVLLSLAANMSWPLHQLDVNNAF 1183
DG + ++KARLVA+G+TQTYGIDY TFAPVAK+ TVRVLLSLAAN+ WPL Q DV N F
Sbjct: 743 DGXIERFKARLVAKGYTQTYGIDYTXTFAPVAKINTVRVLLSLAANLDWPLQQFDVKNXF 802
Query: 1182 LHGD 1171
LHG+
Sbjct: 803 LHGE 806
Score = 58.2 bits (139), Expect(4) = e-131
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = -1
Query: 601 LLVQVSAISQFMHSP*TPHLEAAQRMLRYLKGSPSRGIQY-KKTKHF*VEAYSDADW 434
L +S +SQ+MH+P H+ A R+LRYLK +P +GI + K H +E Y+DADW
Sbjct: 995 LAYALSVVSQYMHNPGEQHMNAVMRILRYLKNAPGKGILFAKNVNHQSIEVYTDADW 1051
>emb|CAN79930.1| hypothetical protein VITISV_007488 [Vitis vinifera]
Length = 1128
Score = 202 bits (513), Expect(4) = e-128
Identities = 110/195 (56%), Positives = 135/195 (69%), Gaps = 3/195 (1%)
Frame = -3
Query: 1169 LSEEVSMRLPPGLKLAGSDNC--VCKLKKSLYGLKQSPRAWFERFSEVVKKASYSQSQAD 996
LSEEV M LPPG + C VCKLKKSLYGLKQSPRAWF RF++ ++ Y QS +D
Sbjct: 734 LSEEVYMDLPPGC-MVSEKQCQKVCKLKKSLYGLKQSPRAWFGRFTKSMRAFGYRQSNSD 792
Query: 995 HTLFVRRP*SNITALIVYVDDIVVTGNDPSEITKLKTFLSSHFETKDLGQLKYFLGIEVV 816
HTLF+++ IT LIVYVDD+VVTGNDP E L+ +LS FE KDLG LKYFLGIEV
Sbjct: 793 HTLFLKKQHGKITXLIVYVDDMVVTGNDPEERKALQNYLSREFEMKDLGPLKYFLGIEVS 852
Query: 815 RSQQGIFISQRKYVLDLLSETE*T-C*IADTPIDQNHRLNHIDGDPIQDTEMFQ*LVGRQ 639
RS +GIF+SQRKY LDLL E + C +TPI++ +L + +Q LVGR
Sbjct: 853 RSSEGIFLSQRKYALDLLXEXGMSGCQPVNTPIEEGMKLCVEXNQVSTBKGRYQRLVGRL 912
Query: 638 IYLSHTRPDIAYVVS 594
+YL+HTRPD+AY +S
Sbjct: 913 MYLAHTRPDLAYALS 927
Score = 168 bits (425), Expect(4) = e-128
Identities = 81/143 (56%), Positives = 103/143 (72%)
Frame = -3
Query: 434 AGSITDRRSTTGYCAFVGGNLISWRSKKQPVVARSSAEAEFRAMAHGVCELLWLRILIGE 255
AG++ DRRST+GY FVGGNL++W+SK Q VARSSAEAEFR MA G+CE LWLR L+ +
Sbjct: 979 AGAVDDRRSTSGYFTFVGGNLVTWKSKXQNXVARSSAEAEFRGMALGLCEALWLRXLLQD 1038
Query: 254 LGIHVQEPMNFYCDNKAAISIAHNPV*HDRTKHIEVDHHFIKE*LQLKVICTPYVSRTDQ 75
LG ++P+ +CDNKAA IAHNP HDRTKH+EVD FIKE L K++ P + DQ
Sbjct: 1039 LGYLSRQPIXLFCDNKAACDIAHNPXQHDRTKHVEVDRFFIKEKLDDKIVELPKIRSEDQ 1098
Query: 74 VADVLTKGVAKSCLQTVIGKLGL 6
+AD+LTK V+ + KLG+
Sbjct: 1099 LADILTKVVSSQVFSKFLDKLGM 1121
Score = 107 bits (268), Expect(4) = e-128
Identities = 48/64 (75%), Positives = 57/64 (89%)
Frame = -2
Query: 1362 DGSVNKYKARLVARGFTQTYGIDYLETFAPVAKMKTVRVLLSLAANMSWPLHQLDVNNAF 1183
DGS+ ++KARLVA+G+TQTYGIDY ETFAPVAK+ T+RVLLSLAAN+ WPL Q DV NAF
Sbjct: 670 DGSIERFKARLVAKGYTQTYGIDYTETFAPVAKINTIRVLLSLAANLDWPLQQFDVKNAF 729
Query: 1182 LHGD 1171
LHG+
Sbjct: 730 LHGE 733
Score = 52.8 bits (125), Expect(4) = e-128
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = -1
Query: 601 LLVQVSAISQFMHSP*TPHLEAAQRMLRYLKGSPSRGIQY-KKTKHF*VEAYSDADW 434
L +S +S +MH+P H+ A R+LRYLK +P +GI + K H +E Y+D DW
Sbjct: 922 LAYALSVVSXYMHNPGEQHMNAXMRILRYLKNAPGKGILFAKNVDHQSIEXYTDXDW 978
>emb|CAN69597.1| hypothetical protein VITISV_038518 [Vitis vinifera]
Length = 1893
Score = 193 bits (490), Expect(4) = e-126
Identities = 102/174 (58%), Positives = 124/174 (71%), Gaps = 2/174 (1%)
Frame = -3
Query: 1106 VCKLKKSLYGLKQSPRAWFERFSEVVKKASYSQSQADHTLFVRRP*SNITA-LIVYVDDI 930
VCKL+KSLYGLKQSPRAWF+RF++ V K Y Q QADHTLFV++ + A LI+YVDDI
Sbjct: 1521 VCKLQKSLYGLKQSPRAWFDRFTKAVLKLGYKQGQADHTLFVKKSHAGKMAILIIYVDDI 1580
Query: 929 VVTGNDPSEITKLKTFLSSHFETKDLGQLKYFLGIEVVRSQQGIFISQRKYVLDLLSETE 750
+++GND E+ LK +LS FE KDLG LKYFLG+EV RS++GI +SQRKY+LDLL ET
Sbjct: 1581 ILSGNDMEELQNLKKYLSEEFEVKDLGNLKYFLGMEVARSRKGIVVSQRKYILDLLKETG 1640
Query: 749 *T-C*IADTPIDQNHRLNHIDGDPIQDTEMFQ*LVGRQIYLSHTRPDIAYVVSA 591
C DTP+D +L D +Q LVGR IYLSHTRPDI + VSA
Sbjct: 1641 MLGCKPIDTPMDSQKKLGIEKESTPVDRGRYQWLVGRLIYLSHTRPDIGFAVSA 1694
Score = 162 bits (411), Expect(4) = e-126
Identities = 79/143 (55%), Positives = 103/143 (72%)
Frame = -3
Query: 434 AGSITDRRSTTGYCAFVGGNLISWRSKKQPVVARSSAEAEFRAMAHGVCELLWLRILIGE 255
AG+I DRRST+GYC+FV GNL++WRSKKQ VVARSSAEAE+RA+A G+CE +W++ ++ E
Sbjct: 1744 AGNIIDRRSTSGYCSFVWGNLVTWRSKKQSVVARSSAEAEYRALAQGICEGIWIKRVLSE 1803
Query: 254 LGIHVQEPMNFYCDNKAAISIAHNPV*HDRTKHIEVDHHFIKE*LQLKVICTPYVSRTDQ 75
LG P+ CDN+AAISIA NPV HDRTKH+E+D HFI E + + + YV Q
Sbjct: 1804 LGQTSSSPILMMCDNQAAISIAKNPVHHDRTKHVEIDRHFITEKVTSETVKLNYVPTKHQ 1863
Query: 74 VADVLTKGVAKSCLQTVIGKLGL 6
AD+LTK + + + KLGL
Sbjct: 1864 TADILTKALPRPNFXDLTCKLGL 1886
Score = 102 bits (253), Expect(4) = e-126
Identities = 46/64 (71%), Positives = 55/64 (85%)
Frame = -2
Query: 1362 DGSVNKYKARLVARGFTQTYGIDYLETFAPVAKMKTVRVLLSLAANMSWPLHQLDVNNAF 1183
DGSV ++KARLVARGFTQ+YGIDY ETFAP+AK+ T+R+LLSLA N W L QLD+ NAF
Sbjct: 1453 DGSVERFKARLVARGFTQSYGIDYQETFAPIAKLNTIRILLSLAVNQDWCLQQLDIKNAF 1512
Query: 1182 LHGD 1171
L+GD
Sbjct: 1513 LNGD 1516
Score = 67.0 bits (162), Expect(4) = e-126
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = -1
Query: 589 VSAISQFMHSP*TPHLEAAQRMLRYLKGSPSRGIQYKKTKHF*VEAYSDADW 434
VSA+SQFMHSP H+EA R+LRYLK +P +G+ ++KT++ E YSDADW
Sbjct: 1692 VSAVSQFMHSPTXEHMEAVYRILRYLKMTPGKGLFFRKTENRDTEVYSDADW 1743