BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022836
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containi...   250   1e-64
ref|XP_002303960.1| predicted protein [Populus trichocarpa] gi|2...   244   5e-63
ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containi...   243   2e-62
ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containi...   242   3e-62
ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containi...   240   8e-62

>ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Vitis vinifera]
          Length = 849

 Score =  250 bits (638), Expect = 1e-64
 Identities = 117/152 (76%), Positives = 137/152 (90%)
 Frame = +1

Query: 1    IRPNGVTFLCVLSACSHSGLVDEGLRYFNSMKTDHGLEPALDHYGAVVDLLGRAGKLDEA 180
            I+PN VTFLCVLSACSHSGLV+EG +YF SMK D+GLEPA+DHYGA+VDLLGRA +L+EA
Sbjct: 575  IKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEA 634

Query: 181  WKFIQQMPIEPGISVFGAMLGACKIHKNVQLGEMAAKRLFELEPKEGGYHVLLANIYATA 360
            W FIQ+MPIEP ISVFGAMLGAC+IHKNV+LGE AA R+F+L+P +GGYHVLLANIYATA
Sbjct: 635  WDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATA 694

Query: 361  SMWKDVAKVRTMMKNKGLQKTPGCSLVELRNE 456
            SMW  VA+VRT M+ KG+QKTPG S+VEL+NE
Sbjct: 695  SMWDKVARVRTTMEKKGIQKTPGWSVVELQNE 726


>ref|XP_002303960.1| predicted protein [Populus trichocarpa] gi|222841392|gb|EEE78939.1|
           predicted protein [Populus trichocarpa]
          Length = 704

 Score =  244 bits (623), Expect = 5e-63
 Identities = 113/152 (74%), Positives = 134/152 (88%)
 Frame = +1

Query: 1   IRPNGVTFLCVLSACSHSGLVDEGLRYFNSMKTDHGLEPALDHYGAVVDLLGRAGKLDEA 180
           I+PN +TFLC LSACSHSGLV+EGL +F SMK D+G+EP +DHYGA+VDLLGRAG+L++A
Sbjct: 430 IKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQA 489

Query: 181 WKFIQQMPIEPGISVFGAMLGACKIHKNVQLGEMAAKRLFELEPKEGGYHVLLANIYATA 360
           W FIQ+MPI+PGI+V+GAMLGACKIHKNV LGE AA  +F+L P +GGYHVLLANIYATA
Sbjct: 490 WDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATA 549

Query: 361 SMWKDVAKVRTMMKNKGLQKTPGCSLVELRNE 456
           SMW  VAKVRT+M+  GLQKTPGCSLVE+ NE
Sbjct: 550 SMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNE 581


>ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  243 bits (619), Expect = 2e-62
 Identities = 109/152 (71%), Positives = 135/152 (88%)
 Frame = +1

Query: 1   IRPNGVTFLCVLSACSHSGLVDEGLRYFNSMKTDHGLEPALDHYGAVVDLLGRAGKLDEA 180
           ++PN +TFL V++ACSHSGLV+EG+ YF SMK ++GLEP +DHYGA+VDLLGRAG+LD+A
Sbjct: 542 VKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDA 601

Query: 181 WKFIQQMPIEPGISVFGAMLGACKIHKNVQLGEMAAKRLFELEPKEGGYHVLLANIYATA 360
           WKFIQ MP++PGI+V GAMLGAC+IHKNV+LGE  A  LF+L+P +GGYHVLLAN+YA+A
Sbjct: 602 WKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASA 661

Query: 361 SMWKDVAKVRTMMKNKGLQKTPGCSLVELRNE 456
           SMW  VA+VRT M+ KG+QKTPGCSLVELRNE
Sbjct: 662 SMWDKVARVRTAMEKKGIQKTPGCSLVELRNE 693


>ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Cucumis sativus]
          Length = 821

 Score =  242 bits (617), Expect = 3e-62
 Identities = 110/152 (72%), Positives = 133/152 (87%)
 Frame = +1

Query: 1    IRPNGVTFLCVLSACSHSGLVDEGLRYFNSMKTDHGLEPALDHYGAVVDLLGRAGKLDEA 180
            + PN +T+L V+SACSHSGLVDEGLR+F SMK D+GLEP++DHYGA+VDLLGRAG++ EA
Sbjct: 547  VEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEA 606

Query: 181  WKFIQQMPIEPGISVFGAMLGACKIHKNVQLGEMAAKRLFELEPKEGGYHVLLANIYATA 360
            W FI+ MPI PGI+V+GAMLGACKIHKN+++GE AAK+LFEL P EGGYHVLLANIYA+ 
Sbjct: 607  WDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYAST 666

Query: 361  SMWKDVAKVRTMMKNKGLQKTPGCSLVELRNE 456
            S W  VA+VR  M+ KGL+KTPGCS+VELRNE
Sbjct: 667  SKWSKVAEVRKTMEKKGLKKTPGCSVVELRNE 698


>ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Brachypodium distachyon]
          Length = 900

 Score =  240 bits (613), Expect = 8e-62
 Identities = 112/150 (74%), Positives = 133/150 (88%)
 Frame = +1

Query: 7    PNGVTFLCVLSACSHSGLVDEGLRYFNSMKTDHGLEPALDHYGAVVDLLGRAGKLDEAWK 186
            PN  TFL VLSACSH+GLVDEG  YF+SMK D+GLEP ++HYG +VDLLGRAGKL EAW 
Sbjct: 628  PNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWS 687

Query: 187  FIQQMPIEPGISVFGAMLGACKIHKNVQLGEMAAKRLFELEPKEGGYHVLLANIYATASM 366
            FIQ+MP+EPGISV+GAMLGACK+HKNV+L E +A+R+FELEP+EG YHVLLANIYA AS+
Sbjct: 688  FIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASL 747

Query: 367  WKDVAKVRTMMKNKGLQKTPGCSLVELRNE 456
            WKDVA+VRT M+ KGLQKTPG S+V+L+NE
Sbjct: 748  WKDVARVRTAMEKKGLQKTPGWSIVQLKNE 777