BLASTX nr result

ID: Coptis25_contig00022833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022833
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17459.3| unnamed protein product [Vitis vinifera]              122   4e-26
ref|XP_002268900.1| PREDICTED: uncharacterized protein LOC100250...   122   4e-26
ref|XP_003606968.1| Sec14 cytosolic factor [Medicago truncatula]...   116   2e-24
emb|CBI37682.3| unnamed protein product [Vitis vinifera]              109   3e-22
ref|XP_002280238.2| PREDICTED: uncharacterized protein LOC100245...   108   3e-22

>emb|CBI17459.3| unnamed protein product [Vitis vinifera]
          Length = 586

 Score =  122 bits (305), Expect = 4e-26
 Identities = 63/117 (53%), Positives = 80/117 (68%), Gaps = 2/117 (1%)
 Frame = -1

Query: 373 LEVIDATELPEFLGGTCTCADHGGCMRSDKGPWKDPKILQCVQNGDAACRKISMMSGTDA 194
           LE+I+A+ELPEFLGGTCTCAD GGCMRSDKGPWKDP+IL+ VQNG A CR       T  
Sbjct: 282 LEIIEASELPEFLGGTCTCADQGGCMRSDKGPWKDPEILRMVQNGYAICRTKCESQSTAE 341

Query: 193 KTVSEGEKVYPKGCDSSNPETVVHE-DETRVIAPKLD-EYMVHRQLSPVHEEAQLGK 29
           KT+SE E VYPK         V  E ++ + ++P++   Y+ H  LSPVHEE ++ +
Sbjct: 342 KTISEDEIVYPK---------VSREVEDIQSLSPEVPRSYIEHPNLSPVHEEVRINQ 389


>ref|XP_002268900.1| PREDICTED: uncharacterized protein LOC100250656 [Vitis vinifera]
          Length = 609

 Score =  122 bits (305), Expect = 4e-26
 Identities = 63/117 (53%), Positives = 80/117 (68%), Gaps = 2/117 (1%)
 Frame = -1

Query: 373 LEVIDATELPEFLGGTCTCADHGGCMRSDKGPWKDPKILQCVQNGDAACRKISMMSGTDA 194
           LE+I+A+ELPEFLGGTCTCAD GGCMRSDKGPWKDP+IL+ VQNG A CR       T  
Sbjct: 282 LEIIEASELPEFLGGTCTCADQGGCMRSDKGPWKDPEILRMVQNGYAICRTKCESQSTAE 341

Query: 193 KTVSEGEKVYPKGCDSSNPETVVHE-DETRVIAPKLD-EYMVHRQLSPVHEEAQLGK 29
           KT+SE E VYPK         V  E ++ + ++P++   Y+ H  LSPVHEE ++ +
Sbjct: 342 KTISEDEIVYPK---------VSREVEDIQSLSPEVPRSYIEHPNLSPVHEEVRINQ 389


>ref|XP_003606968.1| Sec14 cytosolic factor [Medicago truncatula]
           gi|355508023|gb|AES89165.1| Sec14 cytosolic factor
           [Medicago truncatula]
          Length = 565

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/85 (64%), Positives = 65/85 (76%)
 Frame = -1

Query: 373 LEVIDATELPEFLGGTCTCADHGGCMRSDKGPWKDPKILQCVQNGDAACRKISMMSGTDA 194
           LE+IDA+ELPEFLGGTCTCAD GGCM SDKGPW DP+IL+ VQNG+A CR+   +S  + 
Sbjct: 292 LEIIDASELPEFLGGTCTCADKGGCMLSDKGPWNDPEILKMVQNGEAKCRR-KTLSEVEE 350

Query: 193 KTVSEGEKVYPKGCDSSNPETVVHE 119
           KT+ E E V  KGCDS N E V+ E
Sbjct: 351 KTIVEDEGVCQKGCDSFNKEYVLEE 375


>emb|CBI37682.3| unnamed protein product [Vitis vinifera]
          Length = 559

 Score =  109 bits (272), Expect = 3e-22
 Identities = 60/116 (51%), Positives = 75/116 (64%), Gaps = 1/116 (0%)
 Frame = -1

Query: 373 LEVIDATELPEFLGGTCTCADHGGCMRSDKGPWKDPKILQCVQNGDAACRKISMMSGTDA 194
           LEVIDA+ELPEFLGGTCTCAD GGCMRSDKGPW DP+IL+  QN DA   K  ++   D 
Sbjct: 236 LEVIDASELPEFLGGTCTCADKGGCMRSDKGPWNDPEILKMAQNYDAKSFKKILIPVIDE 295

Query: 193 KTVSEGEKVYPKGCDSSNPETVVHEDETRVIAPKL-DEYMVHRQLSPVHEEAQLGK 29
            TVS GE++  K CDS + +      +    + +L  E++ H+ LSPV EE    K
Sbjct: 296 NTVS-GEEMAHKKCDSFDSDISFDSGDKWSHSSRLAKEHVEHQPLSPVQEEVSFLK 350


>ref|XP_002280238.2| PREDICTED: uncharacterized protein LOC100245225, partial [Vitis
           vinifera]
          Length = 619

 Score =  108 bits (271), Expect = 3e-22
 Identities = 59/111 (53%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
 Frame = -1

Query: 373 LEVIDATELPEFLGGTCTCADHGGCMRSDKGPWKDPKILQCVQNGDAACRKISMMSGTDA 194
           LEVIDA+ELPEFLGGTCTCAD GGCMRSDKGPW DP+IL+  QN DA   K  ++   D 
Sbjct: 283 LEVIDASELPEFLGGTCTCADKGGCMRSDKGPWNDPEILKMAQNYDAKSFKKILIPVIDE 342

Query: 193 KTVSEGEKVYPKGCDSSNPETVVHEDETRVIAPKL-DEYMVHRQLSPVHEE 44
            TVS GE++  K CDS + +      +    + +L  E++ H+ LSPV EE
Sbjct: 343 NTVS-GEEMAHKKCDSFDSDISFDSGDKWSHSSRLAKEHVEHQPLSPVQEE 392


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